scholarly journals Draft Genome Sequence of a Novel Marine Bacterium, Paraglaciecola sp. Strain S66, with Hydrolytic Activity against Seaweed Polysaccharides

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Mikkel Schultz-Johansen ◽  
Mikkel A. Glaring ◽  
Pernille K. Bech ◽  
Peter Stougaard
Keyword(s):  
Genome Sequence ◽  
Cell Walls ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Hydrolytic Activity ◽  
Draft Genome Sequence ◽  
Marine Samples ◽  
Encoding Genes ◽  
Predicted Function

A novel agarolytic gammaproteobacterium, Paraglaciecola sp. S66, was isolated from marine samples of eelgrass ( Zostera sp.) and sequenced. The draft genome contains a large number of enzyme-encoding genes with predicted function against several complex polysaccharides found in the cell walls of algae.

scholarly journals Draft Genome Sequence of a Selenite- and Tellurite-Reducing Marine Bacterium, Lysinibacillus sp. Strain ZYM-1

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
Yonghe Zhao ◽  
Yuxuan Dong ◽  
Yiwen Zhang ◽  
Lin Che ◽  
Haixia Pan ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Marine Sediments ◽  
High Resistance ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Metal Resistance ◽  
Draft Genome Sequence ◽  
Gram Positive ◽  
Positive Strain ◽  
Tellurite Reduction

Lysinibacillus sp. ZYM-1, a Gram-positive strain isolated from marine sediments, reduces selenite and tellurite efficiently. Meanwhile, it also exhibits high resistance to Zn2+ and Mn2+. Here, we report the draft genome sequence of strain ZYM-1, which contains genes related to selenite and tellurite reduction and also metal resistance.

scholarly journals Draft Genome Sequence of the Iridescent Marine Bacterium Cellulophaga lytica CECT 8139

2017 ◽  
Vol 5 (36) ◽  
Author(s):  
Maylis Chapelais-Baron ◽  
Isabelle Goubet ◽  
Eric Duchaud ◽  
Eric Rosenfeld
Keyword(s):  
Genome Sequence ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Physiological Properties

ABSTRACT Some species of the genus Cellulophaga have been reported as having biotechnological interests and noteworthy physiological properties. We report here the draft genome sequence of Cellulophaga lytica CECT 8139, a bacterium that produces an intensely iridescent colony biofilm on agar surfaces.

scholarly journals Draft Genome Sequence of the Axenic Strain Phormidesmispriestleyi ULC007, a Cyanobacterium Isolated from Lake Bruehwiler (Larsemann Hills, Antarctica)

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Yannick Lara ◽  
Benoit Durieu ◽  
Luc Cornet ◽  
Olivier Verlaine ◽  
Rosmarie Rippka ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Axenic Strain ◽  
Larsemann Hills ◽  
Freshwater Cyanobacterium ◽  
Protein Encoding ◽  
Encoding Genes

ABSTRACT Phormidesmis priestleyi ULC007 is an Antarctic freshwater cyanobacterium. Its draft genome is 5,684,389 bp long. It contains a total of 5,604 protein-encoding genes, of which 22.2% have no clear homologues in known genomes. To date, this draft genome is the first one ever determined for an axenic cyanobacterium from Antarctica.

scholarly journals Draft Genome Sequence of Ezakiella peruensis Strain M6.X2, a Human Gut Gram-Positive Anaerobic Coccus

2018 ◽  
Vol 6 (9) ◽  
pp. e01487-17
Author(s):  
Awa Diop ◽  
Khoudia Diop ◽  
Enora Tomei ◽  
Didier Raoult ◽  
Florence Fenollar ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Draft Genome Sequence ◽  
Human Gut ◽  
Gene Encoding ◽  
Content Type ◽  
Protein Encoding ◽  
Short Palindromic Repeat ◽  
Encoding Genes

ABSTRACT We report here the draft genome sequence of Ezakiella peruensis strain M6.X2T. The draft genome is 1,672,788 bp long and harbors 1,589 predicted protein-encoding genes, including 26 antibiotic resistance genes with 1 gene encoding vancomycin resistance. The genome also exhibits 1 clustered regularly interspaced short palindromic repeat region and 333 genes acquired by horizontal gene transfer.

scholarly journals Draft Genome Sequence of the Hydrogenogenic Carboxydotroph Moorella stamsii DSM 26271

2018 ◽  
Vol 6 (18) ◽  
Author(s):  
Anja Poehlein ◽  
Tim Böer ◽  
Kerrin Steensen ◽  
Rolf Daniel
Keyword(s):  
Carbon Monoxide ◽  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Obligate Anaerobic ◽  
Protein Encoding ◽  
Encoding Genes

ABSTRACT The spore-forming, thermophilic, and obligate anaerobic bacterium Moorella stamsii was isolated from digester sludge. Apart from its ability to use carbon monoxide for growth, M. stamsii harbors several enzymes for the use of different sugars. The draft genome has a size of 3,329 Mb and contains 3,306 predicted protein-encoding genes.

scholarly journals Draft Genome Sequence of Rubricoccus marinus SG-29T, a Marine Bacterium within the Family Rhodothermaceae, Which Contains Two Different Rhodopsin Genes

2017 ◽  
Vol 5 (38) ◽  
Author(s):  
Yu Nakajima ◽  
Susumu Yoshizawa ◽  
Sanghwa Park ◽  
Yohei Kumagai ◽  
Shu-Kuan Wong ◽  
...  
Keyword(s):  
Genome Sequence ◽  
North Pacific ◽  
Western North Pacific ◽  
Marine Bacterium ◽  
North Pacific Ocean ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
The Family ◽  
Different Types

ABSTRACT Here, we report the draft genome sequence of Rubricoccus marinus SG-29T, a bacterium isolated from the western North Pacific Ocean. R. marinus SG-29T possesses two different types of rhodopsin genes and belongs to the family Rhodothermaceae, with which halophilic, thermophilic, and marine bacteria are associated.

scholarly journals Draft Genome Sequence of Paenibacillus polymyxa KF-1, an Excellent Producer of Microbicides

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Yumei Li ◽  
Qiang Li ◽  
Yamei Li ◽  
Juan Gao ◽  
Xiangyu Fan
Keyword(s):  
Antimicrobial Activity ◽  
Genome Sequence ◽  
Draft Genome ◽  
Paenibacillus Polymyxa ◽  
Draft Genome Sequence ◽  
Biosynthetic Pathways ◽  
Encoding Genes

We report here the draft genome sequence of Paenibacillus polymyxa KF-1, which exhibits excellent antimicrobial activity. It encodes the synthase of bacitracin, kalimantacin, bacillomycin, iturin, fusaricidin, tridecaptin, and pelgipeptin and biosynthetic pathways of antiviral curldan and levan polysaccharides. Also, a novel prophage is involved in this genome that contains endolysin-encoding genes.

scholarly journals High-Quality Draft Genome Sequence of Kallotenue papyrolyticum JKG1 T Reveals Broad Heterotrophic Capacity Focused on Carbohydrate and Amino Acid Metabolism

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Brian P. Hedlund ◽  
Senthil K. Murugapiran ◽  
Marcel Huntemann ◽  
Alicia Clum ◽  
Manoj Pillay ◽  
...  
Keyword(s):  
Amino Acids ◽  
Amino Acid ◽  
Genome Sequence ◽  
Amino Acid Metabolism ◽  
Acid Metabolism ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
High Quality ◽  
Encoding Genes

The draft genome of Kallotenue papyrolyticum JKG1 T , a member of the order Kallotenuales , class Chloroflexia , consists of 4,475,263 bp in 4 contigs and encodes 4,010 predicted genes, 49 tRNA-encoding genes, and 3 rRNA operons. The genome is consistent with a heterotrophic lifestyle including catabolism of polysaccharides and amino acids.

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