scholarly journals Complete Genome Sequences of Two Geographically Distinct Legionella micdadei Clinical Isolates

2017 ◽  
Vol 5 (22) ◽  
Author(s):  
Amy J. Osborne ◽  
Bethany R. Jose ◽  
Jasper Perry ◽  
Zoe Smeele ◽  
Jack Aitken ◽  
...  

ABSTRACT Legionella is a highly diverse genus of intracellular bacterial pathogens that cause Legionnaire’s disease (LD), an often severe form of pneumonia. Two L. micdadei sp. clinical isolates, obtained from patients hospitalized with LD from geographically distinct areas, were sequenced using PacBio SMRT cell technology, identifying incomplete phage regions, which may impact virulence.

2001 ◽  
Vol 58 (10) ◽  
pp. 592-598
Author(s):  
Andreas F. Widmer

Legionellen sind Wasserkeime und können zwei typische Krankheitsbilder auslösen: Das Pontiac-Fieber und die Legionärskrankheit. Letztere ist eine seltene (3–7%), potentiell lebensbedrohliche Pneumonie. In fast allen Fällen ist Legionella pneumophila Serogruppe I für die Pneumonie verantwortlich. Es gibt aber 42 Arten und 64 Serotypen, wobei Legionella micdadei der zweithäufigste Erreger ist. Die Letalität der Legionellenpneumonie liegt immer noch um 5% bis 10% und ist bei hospitalisierten Patienten höher. Etablierte Risiken sind Nikotinabusus, chronisch-obstruktive Pneumopathie, sowie Immunsuppression. Die Kultur bedingt Spezialnährmedien, so dass die Diagnose nicht mit Routinemethoden gestellt werden kann. Die Einführung des Antigentestes im Urin hat die Diagnostik wesentlich verbessert. Eine PCR für Sputum ergänzt die neuen diagnostischen Möglichkeiten, wobei hier die Kosten und die Spezifität die Anwendung auf Spezialfälle einschränkt. Therapie der Wahl sind neuere Makrolide oder alternativ neuere Quinolone, die sich vor allem bei transplantierten Patienten auch als Therapie der ersten Wahl durchgesetzt haben. Die Primärprävention umfasst das Halten der Warmwasserversorgung am Boiler bei 60°C, und an Hähnen zwei Minuten nach Öffnen 50°C.


2020 ◽  
Vol 9 (40) ◽  
Author(s):  
Peechanika Chopjitt ◽  
Thidathip Wongsurawat ◽  
Piroon Jenjaroenpun ◽  
Parichart Boueroy ◽  
Rujirat Hatrongjit ◽  
...  

ABSTRACT Here, we report the complete genome sequences of four clinical isolates of extensively drug-resistant Acinetobacter baumannii (XDRAB), isolated in Thailand. These results revealed multiple antimicrobial-resistant genes, each involving two sequence type 16 (ST16) isolates, ST2, and a novel sequence type isolate, ST1479.


2020 ◽  
Vol 9 (24) ◽  
Author(s):  
Indranil Biswas

ABSTRACT Streptococcus mutans is known to produce various antimicrobial peptides called mutacins. Two clinical isolates, T8 and UA140, are well characterized regarding their mutacin production, but genome sequence information was previously unavailable. Complete genome sequences of these two mutacin-producing strains are reported here.


2017 ◽  
Vol 5 (44) ◽  
Author(s):  
Aaron Villarma ◽  
Christopher A. Gulvik ◽  
Lori A. Rowe ◽  
Mili Sheth ◽  
Phalasy Juieng ◽  
...  

ABSTRACT We report here 1 near-complete genome sequence and 12 complete genome sequences for clinical Capnocytophaga isolates. Total read coverages ranged from 211× to 737×, and genome sizes ranged from 2.41 Mb to 3.10 Mb. These genomes will enable a more comprehensive taxonomic evaluation of the Capnocytophaga genus.


2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Matthew C. Riley ◽  
Vincent Perreten ◽  
David A. Bemis ◽  
Stephen A. Kania

We report the first complete genome sequences of three predominant clones (ST68, ST71, and ST84) of methicillin-resistant Staphylococcus pseudintermedius in North America. All strains were isolated from canine infections and have different SCC mec elements and antibiotic resistance gene patterns.


2018 ◽  
Vol 6 (17) ◽  
Author(s):  
Slimane Khayi ◽  
Pauline Blin ◽  
Teik Min Chong ◽  
Kok-Gan Chan ◽  
Denis Faure

ABSTRACT Dickeya solani species are emerging bacterial pathogens of Solanum tuberosum . Here, we announce the complete genome sequences of two strains, Dickeya solani D s0432-1 and PPO 9019. Strain PPO 9019 represents the first described member of the genus Dickeya with an extrachromosomal genetic element.


2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Yun Young Go ◽  
Eunhye Jung ◽  
Young Eui Jeong ◽  
Udeni B. R. Balasuriya

In this study, we report the complete genome sequences of three clinical isolates of dengue virus serotype 1 isolated from South Korean travelers returning from different countries in Southeast Asia. The nucleotide sequence identities ranged from 91.5 to 92.2%, while the amino acid sequence identities ranged from 97.5 to 97.9% among the three clinical isolates.


1999 ◽  
Vol 67 (8) ◽  
pp. 4134-4142 ◽  
Author(s):  
Amrita D. Joshi ◽  
Michele S. Swanson

ABSTRACT While the majority of Legionnaire’s disease has been attributed toLegionella pneumophila, Legionella micdadei can cause a similar infection in immunocompromised people. Consistent with its epidemiological profile, the growth of L. micdadei in cultured macrophages is less robust than that of L. pneumophila. To identify those features of theLegionella spp. which are correlated to efficient growth in macrophages, two approaches were taken. First, a phenotypic analysis compared four clinical isolates of L. micdadei to one well-characterized strain of L. pneumophila. Seven traits previously correlated with the virulence of L. pneumophilawere evaluated: infection and replication in cultured macrophages, evasion of phagosome-lysosome fusion, contact-dependent cytotoxicity, sodium sensitivity, osmotic resistance, and conjugal DNA transfer. By nearly every measure, L. micdadei appeared less virulent than L. pneumophila. The surprising exception wasL. micdadei 31B, which evaded lysosomes and replicated in macrophages as efficiently as L. pneumophila, despite lacking both contact-dependent cytopathicity and regulated sodium sensitivity. Second, in an attempt to identify virulence factors genetically, an L. pneumophila genomic library was screened for clones which conferred robust intracellular growth on L. micdadei. No such loci were isolated, consistent with the multiple phenotypic differences observed for the two species. Apparently, L. pneumophila and L. micdadei use distinct strategies to colonize alveolar macrophages, causing Legionnaire’s disease.


2018 ◽  
Vol 6 (4) ◽  
Author(s):  
Slimane Khayi ◽  
Pauline Blin ◽  
Teik Min Chong ◽  
Kévin Robic ◽  
Kok-Gan Chan ◽  
...  

ABSTRACT Dickeya spp. are bacterial pathogens causing soft-rot and blackleg diseases on a wide range of ornamental plants and crops. In this paper, we announce the PacBio complete genome sequences of the plant pathogens Dickeya solani RNS 08.23.3.1.A (PRI3337) and Dickeya dianthicola RNS04.9.


2017 ◽  
Vol 5 (37) ◽  
Author(s):  
Michael R. Weigand ◽  
Yanhui Peng ◽  
Pamela K. Cassiday ◽  
Vladimir N. Loparev ◽  
Taccara Johnson ◽  
...  

ABSTRACT Clinical isolates of the respiratory pathogen Bordetella pertussis in the United States have become predominantly deficient for the acellular vaccine immunogen pertactin through various independent mutations. Here, we report the complete genome sequences for four B. pertussis isolates that harbor novel deletions responsible for pertactin deficiency.


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