scholarly journals Draft Genome Sequence of the Enteropathogenic Bacterium Campylobacter jejuni Strain cj255

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Fariha Masood Siddiqui ◽  
Muhammad Ibrahim ◽  
Nighat Noureen ◽  
Zobia Noreen ◽  
Richard W. Titball ◽  
...  
Keyword(s):  
Global Health ◽  
Host Range ◽  
Campylobacter Jejuni ◽  
Genome Sequence ◽  
Draft Genome ◽  
Epidemiological Studies ◽  
Draft Genome Sequence ◽  
Broad Host Range ◽  
Bacterial Gastroenteritis

The enteropathogen Campylobacter jejuni is a global health disaster, being one of the leading causes of bacterial gastroenteritis. Here, we present the draft genome sequence of C. jejuni strain cj255, isolated from a chicken source in Islamabad, Pakistan. The draft genome sequence will aid in epidemiological studies and quarantine of this broad-host-range pathogen.

scholarly journals Draft Genome Sequence of Pseudomonas fuscovaginae, a Broad-Host-Range Pathogen of Plants

2012 ◽  
Vol 194 (10) ◽  
pp. 2765-2766 ◽  
Author(s):  
H. K. Patel ◽  
D. Passos da Silva ◽  
G. Devescovi ◽  
H. Maraite ◽  
K. Paszkiewicz ◽  
...  
Keyword(s):  
Host Range ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Broad Host Range

scholarly journals A Draft Genome Sequence of Pseudomonas syringae pv. tomato T1 Reveals a Type III Effector Repertoire Significantly Divergent from That of Pseudomonas syringae pv. tomato DC3000

2009 ◽  
Vol 22 (1) ◽  
pp. 52-62 ◽  
Author(s):  
Nalvo F. Almeida ◽  
Shuangchun Yan ◽  
Magdalen Lindeberg ◽  
David J. Studholme ◽  
David J. Schneider ◽  
...  
Keyword(s):  
Host Range ◽  
Host Specificity ◽  
Pseudomonas Syringae ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Tomato Dc3000 ◽  
Type Iii ◽  
Host Range Determination ◽  
Range Determination

Diverse gene products including phytotoxins, pathogen-associated molecular patterns, and type III secreted effectors influence interactions between Pseudomonas syringae strains and plants, with additional yet uncharacterized factors likely contributing as well. Of particular interest are those interactions governing pathogen-host specificity. Comparative genomics of closely related pathogens with different host specificity represents an excellent approach for identification of genes contributing to host-range determination. A draft genome sequence of Pseudomonas syringae pv. tomato T1, which is pathogenic on tomato but nonpathogenic on Arabidopsis thaliana, was obtained for this purpose and compared with the genome of the closely related A. thaliana and tomato model pathogen P. syringae pv. tomato DC3000. Although the overall genetic content of each of the two genomes appears to be highly similar, the repertoire of effectors was found to diverge significantly. Several P. syringae pv. tomato T1 effectors absent from strain DC3000 were confirmed to be translocated into plants, with the well-studied effector AvrRpt2 representing a likely candidate for host-range determination. However, the presence of avrRpt2 was not found sufficient to explain A. thaliana resistance to P. syringae pv. tomato T1, suggesting that other effectors and possibly type III secretion system–independent factors also play a role in this interaction.

scholarly journals Draft Genome Sequence of Lactobacillus crispatus JCM5810, Which Can Reduce Campylobacter jejuni Colonization in Chicken Intestine

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Jessica Wooten ◽  
Xiaoji Liu ◽  
Michael J. Miller
Keyword(s):  
Campylobacter Jejuni ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Chicken Intestine ◽  
Lactobacillus Crispatus ◽  
Probiotic Mechanisms

We present the 2.05-Mb draft genome sequence of Lactobacillus crispatus JCM5810, a chicken intestinal isolate with the ability to reduce Campylobacter jejuni colonization in chickens. The genome sequence will provide insights on the probiotic mechanisms of L. crispatus JCM5810.

scholarly journals Draft Genome Sequence of Campylobacter jejuni 11168H

2017 ◽  
Vol 5 (5) ◽  
Author(s):  
Sarah E. Macdonald ◽  
Ozan Gundogdu ◽  
Nick Dorrell ◽  
Brendan W. Wren ◽  
Damer Blake ◽  
...  
Keyword(s):  
Campylobacter Jejuni ◽  
Genome Sequence ◽  
Draft Genome ◽  
Clinical Isolates ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Food Borne ◽  
Low Levels ◽  
Developed World

ABSTRACT Campylobacter jejuni is the most prevalent cause of food-borne gastroenteritis in the developed world. The reference and original sequenced strain C. jejuni NCTC11168 has low levels of motility compared to clinical isolates. Here, we describe the draft genome of the laboratory derived hypermotile variant named 11168H.

scholarly journals Draft Genome Sequence of a Polymyxin-Resistant Klebsiella pneumoniae Clinical Strain Carrying mcr-8.1 and blaNDM-5

2021 ◽  
Vol 10 (12) ◽  
Author(s):  
Na Pei ◽  
Zijuan Jian ◽  
Yirui Liu ◽  
Tianzhu Liang ◽  
Wenen Liu ◽  
...  
Keyword(s):  
Klebsiella Pneumoniae ◽  
Global Health ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
Content Type ◽  
Major Threat ◽  
Carbapenem Resistant

ABSTRACT Carbapenem-resistant Klebsiella pneumoniae (CRKP) is a major threat to global health. Here, we report the draft genome sequence of a Klebsiella pneumoniae clinical strain carrying mcr-8.1 and blaNDM-5.

scholarly journals First Draft Genome Sequence of a Pearl Millet Blast Pathogen, Magnaporthe grisea Strain PMg_Dl, Obtained Using PacBio Single-Molecule Real-Time and Illumina NextSeq 500 Sequencing

2019 ◽  
Vol 8 (20) ◽  
Author(s):  
Ganesan Prakash ◽  
Aundy Kumar ◽  
Neelam Sheoran ◽  
Rashmi Aggarwal ◽  
Chellapilla Tara Satyavathi ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Host Range ◽  
Pearl Millet ◽  
Genome Sequence ◽  
Single Molecule ◽  
Magnaporthe Grisea ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Genome Information

The first draft genome sequence of the pearl millet blast pathogen Magnaporthe grisea PMg_Dl from India is presented. The genome information of M. grisea will be useful to understand the Magnaporthe speciation, genetic diversity, environmental adaptation, and pathogenic and host range determinants.

scholarly journals Draft Genome Sequence ofCampylobacter jejuniBf, an Atypical Strain Able To Grow under Aerobiosis

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Vicky Bronnec ◽  
Nabila Haddad ◽  
Stéphane Cruveiller ◽  
Mathieu Hernould ◽  
Odile Tresse ◽  
...  
Keyword(s):  
Clinical Isolate ◽  
Campylobacter Jejuni ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
French Patient

In this study, we describe the draft genome sequence of aCampylobacter jejuniclinical isolate issued from a French patient suffering from severe campylobacteriosis. This atypical strain is characterized by an unusual resistance to oxygen and the ability to grow under an aerobic atmosphere, a characteristic as-of-yet unique to this species.

scholarly journals Draft Genome Sequence of Ciprofloxacin and Ceftriaxone Resistant Campylobacter jejuni MM26-781 Assigned to Novel ST Isolated From Common Pigeon in Lithuania

2019 ◽  
Vol 15 ◽  
pp. 117693431986846
Author(s):  
Jurgita Aksomaitiene ◽  
Sigita Ramonaite ◽  
Aleksandr Novoslavskij ◽  
Mindaugas Malakauskas ◽  
Egle Kudirkiene
Keyword(s):  
Antibiotic Resistance ◽  
Campylobacter Jejuni ◽  
Genome Sequence ◽  
Molecular Mechanisms ◽  
Draft Genome ◽  
Columba Livia ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Wide Range

Campylobacter jejuni is an important zoonotic pathogen known to be resistant to a wide range of antibiotics worldwide. Campylobacter jejuni may be intrinsically resistant to antibiotics or can acquire antibiotic resistance determinants through gene transfer. However, the knowledge of molecular mechanisms of antimicrobial resistance among Campylobacter isolates from wild birds, especially in Lithuania, is limited. Whole genome sequencing (WGS) is a tool for better understanding the evolutionary and epidemiologic dynamics of C jejuni. This study describes a draft whole genome sequence of C jejuni MM26-781 isolated from a common pigeon ( Columba livia) in Lithuania in 2011 and assigned to ST-6424 (CC179) sequence type. The draft genome sequence contained 1.68 Mb, comprising 1651 coding genes, 40 transfer RNAs, 1 ribosomal RNA, and 69 pseudogenes with an average G + C content of 30.4%. The RAST (Rapid Annotation using Subsystem Technology) pipeline annotated (NCTC11168) a total of 305 subsystems in the genome of C jejuni MM26-781 strain, with most of the genes associated with amino acids and derivatives related to metabolism (18.93%) and protein metabolism (14.43%). The genes and mutations related to antibiotic resistance, including gyrA and gyrB genes associated with quinolone resistance, blaOXA-448 gene (locus tag C9371_07715) associated with resistance to β-lactams, rpoB gene associated with resistance to rifamycin, vgaE gene associated with resistance to streptogramin and efflux system CmeABC ( cmeA, cmeB, cmeC), efflux pump PmrA, and transcriptional regulator CmeR responsible for multidrug resistance in C jejuni MM26-781 chromosome, were identified. Also, the virulence factors, including ciaB, cadF, ceuE, pldA, motB, and bd1A genes, were identified by WGS data analysis.

scholarly journals Draft Genome Sequence of Multidrug-Resistant Abortive Campylobacter jejuni from Northern California

2017 ◽  
Vol 5 (15) ◽  
Author(s):  
Allison M. Weis ◽  
Kristin A. Clothier ◽  
Bihua C. Huang ◽  
Nguyet Kong ◽  
Bart C. Weimer
Keyword(s):  
Campylobacter Jejuni ◽  
Genome Sequence ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Genome Project ◽  
Draft Genome Sequence ◽  
Northern California ◽  
Enteric Bacterium ◽  
Content Type ◽  
Pathogen Genome

ABSTRACT Campylobacter jejuni is an enteric bacterium that can cause abortion in livestock. This is the release of a multidrug-resistant Campylobacter jejuni genome from an isolate that caused an abortion in a cow in northern California. This isolate is part of the 100K Pathogen Genome Project.

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