scholarly journals Draft Genome Sequence of Alkalicoccus saliphilus DSM 15402T, a Haloalkaliphilic Bacterium Isolated from a Mineral Pool

2019 ◽  
Vol 8 (24) ◽  
Author(s):  
Dacheng Qiu ◽  
Ziya Liao ◽  
Weidong Lu ◽  
Haisheng Wang ◽  
Jun Li ◽  
...  
Keyword(s):  
Osmotic Stress ◽  
Genome Sequence ◽  
Draft Genome ◽  
Extreme Environment ◽  
Draft Genome Sequence ◽  
Ph Homeostasis ◽  
Content Type ◽  
Adaptation Mechanisms ◽  
Insight Into

The haloalkaliphilic bacterium Alkalicoccus saliphilus DSM 15402T was isolated from a mineral pool. It grows aerobically at an optimum of 15% (wt/vol) salinity and pH 9.0. The draft genome consists of approximately 3.52 Mb and contains 3,434 predicted genes. Various genes are potentially involved in the adaptation mechanisms for both osmotic stress and pH homeostasis, providing insight into specific adaptations to this double-extreme environment.

scholarly journals Draft Genome Sequence of Natronolimnobius baerhuensis CGMCC 1.3597T, an Aerobic Haloalkaliphilic Archaeon Isolated from a Soda Lake

2017 ◽  
Vol 5 (38) ◽  
Author(s):  
Xiaomeng Guo ◽  
Ziya Liao ◽  
Yanchun Yan ◽  
Mark Holtzapple ◽  
Qingping Hu ◽  
...  
Keyword(s):  
Osmotic Stress ◽  
Genome Sequence ◽  
Inner Mongolia ◽  
Draft Genome ◽  
Soda Lake ◽  
Extreme Environment ◽  
Draft Genome Sequence ◽  
Ph Homeostasis ◽  
Content Type ◽  
Insight Into

ABSTRACT The haloalkaliphilic archaeon Natronolimnobius baerhuensis was isolated from a soda lake in Inner Mongolia (China), growing optimally at about 20% NaCl and pH 9.0. The draft genome consists of approximately 3.91 Mb and contains 3,810 predicted genes. Some genes that regulate intracellular osmotic stress and pH homeostasis were identified, providing insight into specific adaptations to this double-extreme environment.

scholarly journals Draft Genome Sequence of Natranaerobius trueperi DSM 18760T, an Anaerobic, Halophilic, Alkaliphilic, Thermotolerant Bacterium Isolated from a Soda Lake

2017 ◽  
Vol 5 (36) ◽  
Author(s):  
Xiaomeng Guo ◽  
Ziya Liao ◽  
Mark Holtzapple ◽  
Qingping Hu ◽  
Baisuo Zhao
Keyword(s):  
Osmotic Stress ◽  
High Temperatures ◽  
Genome Sequence ◽  
Draft Genome ◽  
Soda Lake ◽  
Genomic Analysis ◽  
Ph Homeostasis ◽  
Content Type ◽  
Adaptation Mechanisms ◽  
Thermotolerant Bacterium

ABSTRACT The anaerobic, halophilic, alkaliphilic, thermotolerant bacterium Natranaerobius trueperi was isolated from a soda lake in Wadi An Natrun, Egypt. It grows optimally at 3.7 M Na+, pH 9.5, and 43°C. The draft genome consists of 2.63 Mb and is composed of 2,681 predicted genes. Genomic analysis showed that various genes are potentially involved in the adaptation mechanisms for osmotic stress, pH homeostasis, and high temperatures.

scholarly journals Draft Genome Sequence of the Putative Marine Pathogen Aquimarina sp. Strain I32.4

2018 ◽  
Vol 6 (17) ◽  
Author(s):  
Hilary J. Ranson ◽  
Jason LaPorte ◽  
Edward Spinard ◽  
Andrei Y. Chistoserdov ◽  
Marta Gomez-Chiarri ◽  
...  
Keyword(s):  
Virulence Factors ◽  
Genome Sequence ◽  
Draft Genome ◽  
Homarus Americanus ◽  
Draft Genome Sequence ◽  
American Lobster ◽  
Content Type ◽  
Shell Disease ◽  
Insight Into

ABSTRACT Aquimarina sp. strain I32.4 (formerly Aquimarina sp. ‘ homaria ’) is a putative pathogen involved in epizootic shell disease in the American lobster ( Homarus americanus ). We report here the draft genome sequence for Aquimarina sp. strain I32.4 and describe virulence factors that may provide insight into its mechanism of pathogenicity.

scholarly journals Draft Genome Sequence of Hydrogenibacillus schlegelii MA48, a Deep-Branching Member of the Bacilli Class of Firmicutes

2017 ◽  
Vol 5 (3) ◽  
Author(s):  
Allison Maker ◽  
James Hemp ◽  
Laura A. Pace ◽  
Lewis M. Ward ◽  
Woodward W. Fischer
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Aerobic Respiration ◽  
Facultative Anaerobe ◽  
Content Type ◽  
Insight Into

ABSTRACT We report here the draft genome sequence of Hydrogenibacillus schlegelii MA48, a thermophilic facultative anaerobe that can oxidize hydrogen aerobically. H. schlegelii MA48 belongs to a deep-branching clade of the Bacilli class and provides important insight into the acquisition of aerobic respiration within the Firmicutes phylum.

scholarly journals Draft Genome Sequence of Nonomuraea sp. Strain C10, a Producer of Brartemicin, Isolated from a Mud Dauber Wasp Nest in Nepal

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Niraj Aryal ◽  
Saefuddin Aziz ◽  
Prajwal Rajbhandari ◽  
Harald Gross
Keyword(s):  
Secondary Metabolites ◽  
Natural Product ◽  
Genome Sequence ◽  
Draft Genome ◽  
Genome Mining ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Insight Into

Nonomuraea sp. strain C10 produces the cytotoxic natural product brartemicin. Here, we report its draft genome sequence to get insight into brartemicin biosynthesis and to enable genome mining for novel secondary metabolites.

scholarly journals Draft Genome Sequence of Methanobacterium sp. Strain 34x, Reconstructed from an Enriched Electromethanogenic Biocathode

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Ala’a Ragab ◽  
Dario R. Shaw ◽  
Krishna P. Katuri ◽  
Pascal E. Saikaly
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Nucleotide Level ◽  
Content Type ◽  
Functional Potential ◽  
Insight Into ◽  
Genomic Similarity

A draft genome sequence of Methanobacterium sp. strain 34x was reconstructed from the metagenome of an enriched electromethanogenic biocathode operated in a microbial electrosynthesis (MES) reactor. Methanobacterium sp. strain 34x has 68.98% nucleotide-level genomic similarity with the closest related methanogen available with a whole-genome assembly, Methanobacterium lacus strain AL-21. This genome will provide insight into the functional potential of methanogens at the biocathodes of MES systems.

scholarly journals Genome Sequence of Bacillus megaterium O1, a Saponin-Degrading Bacterium

2020 ◽  
Vol 9 (40) ◽  
Author(s):  
Cassandra E. Overney ◽  
Jean J. Huang
Keyword(s):  
Carbon Source ◽  
Genome Sequence ◽  
Bacillus Megaterium ◽  
Sole Carbon Source ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Degrading Bacterium ◽  
Sapindus Saponaria ◽  
Insight Into

ABSTRACT Bacillus megaterium strain O1 was isolated from a soapnut (Sapindus saponaria) surface and degrades Quillaja saponin as a sole carbon source. We report the draft genome sequence of B. megaterium O1, which has an estimated size of 5.1 Mb. Study of this isolate will provide insight into mechanisms of saponin degradation.

scholarly journals Genome Sequence of Methylotrophic Azospirillum sp. Strain B2, Isolated from a Raised Sphagnum Bog

2018 ◽  
Vol 6 (23) ◽  
Author(s):  
Denis S. Grouzdev ◽  
Ekaterina N. Tikhonova ◽  
Maria S. Krutkina ◽  
Irina K. Kravchenko
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Soil Bacterium ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Ecological Success ◽  
Sphagnum Bog ◽  
Genomic Basis ◽  
Insight Into

ABSTRACT Azospirillum sp. strain B2 is a soil bacterium which was originally isolated from the Sosvyatskoe raised Sphagnum bog in Russia. Here, we present the approximately 8-Mb draft genome sequence of Azospirillum sp. B2, with the aim of providing insight into the genomic basis of its ecological success in peatland settings.

scholarly journals Draft Genome Sequence of the Extensively Drug-Resistant Pseudomonas aeruginosa Clinical Isolate TUEPA7472

2018 ◽  
Vol 7 (12) ◽  
Author(s):  
Henrike Miess ◽  
Ghazaleh Jahanshah ◽  
Heike Brötz-Oesterhelt ◽  
Matthias Willmann ◽  
Silke Peter ◽  
...  
Keyword(s):  
Pseudomonas Aeruginosa ◽  
Genome Sequence ◽  
Draft Genome ◽  
Resistance Mechanisms ◽  
Draft Genome Sequence ◽  
Drug Resistant ◽  
Gram Negative ◽  
Content Type ◽  
Extensively Drug Resistant ◽  
Insight Into

Pseudomonas aeruginosa TUEPA7472 is extensively drug resistant (XDR) and is a representative Gram-negative rod that is multiresistant toward 4 classes of clinically relevant antibiotics (4MRGN). The 6.8-Mb draft genome sequence of this strain provides insight into these resistance mechanisms and the potential of the strain to produce virulence factors.

scholarly journals First Insight into the Genome Sequence of Clostridium liquoris DSM 100320, a Butyrate- and Ethanol-Producing Bacterium

2018 ◽  
Vol 6 (18) ◽  
Author(s):  
Anja Poehlein ◽  
Hannes Neubauer ◽  
Philipp Niemeyer ◽  
Rolf Daniel
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Strictly Anaerobic ◽  
Gram Positive ◽  
Fermentation Products ◽  
Content Type ◽  
Protein Encoding ◽  
Encoding Genes ◽  
Insight Into

ABSTRACT Clostridium liquoris is a strictly anaerobic, Gram-positive, nonmotile, spore-forming, rod-shaped bacterium. The major fermentation products from glucose are ethanol and butyrate. C. liquoris was isolated from a 20-year-old liquor fermentation pit. The draft genome sequence consists of a chromosome (2.892 Mb) harboring 2,788 predicted protein-encoding genes.

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