scholarly journals Draft Genome Sequences of Lactococcus lactis Strains MS22314, MS22333, MS22336, and MS22337, Isolated from Fermented Camel Milk in Ethiopia

2020 ◽  
Vol 9 (47) ◽  
Author(s):  
Esben Bragason ◽  
Christina Aaby Svendsen ◽  
Mitiku Eshetu Guya ◽  
Tesfemariam Berhe ◽  
Egon Bech Hansen
Keyword(s):  
Genome Size ◽  
Lactococcus Lactis ◽  
Draft Genome ◽  
Tetracycline Resistance ◽  
Illumina Miseq ◽  
Camel Milk ◽  
Genome Sequences ◽  
Content Type

ABSTRACT The genome sequences of four Lactococcus lactis strains isolated from fermented camel milk were sequenced using paired-end Illumina MiSeq reads. The genome size of each strain was about 2.6 Mb, and three of the strains were annotated with tet(S) coding for tetracycline resistance.

scholarly journals Draft Genome Sequences of Lactobacillus salivarius A3iob and Lactobacillus johnsonii CRL1647, Novel Potential Probiotic Strains for Honeybees (Apis mellifera L.)

2018 ◽  
Vol 7 (6) ◽  
Author(s):  
Marcela Carina Audisio ◽  
Leonardo Albarracín ◽  
Maria Julia Torres ◽  
Lucila Saavedra ◽  
Elvira Maria Hebert ◽  
...  
Keyword(s):  
Apis Mellifera ◽  
Genome Sequencing ◽  
Draft Genome ◽  
Illumina Miseq ◽  
Whole Genome ◽  
Genome Sequences ◽  
Lactobacillus Johnsonii ◽  
Lactobacillus Salivarius ◽  
Content Type ◽  
Probiotic Strains

This report describes the draft genome sequences of Lactobacillus salivarius A3iob and Lactobacillus johnsonii CRL1647, probiotic strains isolated from the gut of honeybee Apis mellifera workers. The reads were generated by a whole-genome sequencing (WGS) strategy on an Illumina MiSeq sequencer and were assembled into contigs with total sizes of 2,054,490 and 2,137,413 bp for the A3iob and CRL1647 strains, respectively.

scholarly journals Draft Genome Sequences of Four Pseudomonas aeruginosa Clinical Strains with Various Biofilm Phenotypes

2020 ◽  
Vol 9 (1) ◽  
Author(s):  
Amine M. Boukerb ◽  
Marjolaine Simon ◽  
Erwan Pernet ◽  
Albane Jouault ◽  
Emilie Portier ◽  
...  
Keyword(s):  
Cystic Fibrosis ◽  
Pseudomonas Aeruginosa ◽  
Genome Size ◽  
Draft Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Clinical Strains

Biofilms produced by Pseudomonas aeruginosa present a serious threat to cystic fibrosis patients. Here, we report the draft genome sequences of four cystic fibrosis isolates displaying various mucoid and biofilm phenotypes. The estimated average genome size was about 6,255,986 ± 50,202 bp with a mean G+C content of 66.52 ± 0.06%.

scholarly journals Draft Genome Sequences of Two Strains of Salmonella enterica Serovar Typhimurium Displaying Different Virulence in an Experimental Chicken Model

2017 ◽  
Vol 5 (6) ◽  
Author(s):  
Dele Ogunremi ◽  
Burton Blais ◽  
Hongsheng Huang ◽  
Linru Wang ◽  
Mohamed Elmufti ◽  
...  
Keyword(s):  
Salmonella Enterica ◽  
Salmonella Enterica Serovar Typhimurium ◽  
Virulent Strain ◽  
Draft Genome ◽  
Illumina Miseq ◽  
Genome Sequences ◽  
Content Type ◽  
Serovar Typhimurium ◽  
Chicken Model ◽  
Roche 454

ABSTRACT Salmonella enterica serovar Typhimurium strains 22495 and 22792, obtained from wild birds, were found to display different virulence attributes in an experimental chicken model. Closed genome sequences were assembled after sequencing with the Roche 454 and Illumina MiSeq platforms. An additional plasmid was present in the more virulent strain 22495.

scholarly journals Draft Genome Sequences of Six Strains of Lactococcus lactis (Phylum Firmicutes), Spanning the Seeds of Cucumis sativus L. (Cucumber), Cucumis melo L. (Cantaloupe), and Cucurbita pepo var. turbinate (Acorn Squash)

2020 ◽  
Vol 9 (37) ◽  
Author(s):  
Eman M. Khalaf ◽  
Manish N. Raizada
Keyword(s):  
Cucumis Sativus ◽  
Lactococcus Lactis ◽  
Cucumis Melo ◽  
Cucurbita Pepo ◽  
Draft Genome ◽  
Genome Sequences ◽  
Cucumis Sativus L ◽  
Content Type ◽  
Cucumis Melo L

ABSTRACT We announce the draft genome sequences of six strains of Lactococcus lactis (EKM101L, EKM102L, EKM201L, EKM203L, EKM501L, and EKM502L). These candidate plant probiotics were isolated from surface-sterilized seeds of Cucumis sativus L. (cucumber), Cucumis melo L. (cantaloupe), and Cucurbita pepo var. turbinate (acorn squash). They display beneficial activities, including biocontrol.

scholarly journals Draft Genome Sequences of 43 Lactobacillus Strains from the Species L. curvatus, L. fermentum, L. paracasei, L. plantarum, L. rhamnosus, and L. sakei, Isolated from Food Products

2017 ◽  
Vol 5 (30) ◽  
Author(s):  
Raffael C. Inglin ◽  
Leo Meile ◽  
Marc J. A. Stevens
Keyword(s):  
Draft Genome ◽  
Food Products ◽  
Illumina Miseq ◽  
Genome Sequences ◽  
Content Type

ABSTRACT The genome sequences of 43 Lactobacillus strains from the species L. curvatus, L. fermentum, L. paracasei, L. plantarum, L. rhamnosus, and L. sakei were determined using Illumina MiSeq.

scholarly journals Draft Genome Sequences of 11 Lactococcus lactis subsp. cremoris Strains

2017 ◽  
Vol 5 (11) ◽  
Author(s):  
Michiel Wels ◽  
Lennart Backus ◽  
Jos Boekhorst ◽  
Annereinou Dijkstra ◽  
Marke Beerthuyzen ◽  
...  
Keyword(s):  
Lactic Acid ◽  
Lactic Acid Bacterium ◽  
Lactococcus Lactis ◽  
Dairy Products ◽  
Draft Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Lactococcus Lactis Subsp

ABSTRACT The lactic acid bacterium Lactococcus lactis is widely used for the fermentation of dairy products. Here, we present the draft genome sequences of 11 L. lactis subsp. cremoris strains isolated from different environments.

scholarly journals Draft Genome Sequences of Three Amino Acid-Secreting Lactococcus lactis Strains

2020 ◽  
Vol 9 (16) ◽  
Author(s):  
Jhonatan A. Hernandez-Valdes ◽  
Anne de Jong ◽  
Jan Kok ◽  
Oscar P. Kuipers
Keyword(s):  
Amino Acids ◽  
Amino Acid ◽  
Glutamic Acid ◽  
Lactococcus Lactis ◽  
Food Industry ◽  
Draft Genome ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Content Type ◽  
Acid Secreting

Three Lactococcus lactis strains with the ability to secrete various amino acids (leucine, isoleucine, methionine, valine, glutamic acid, and histidine) were sequenced in order to identify the mechanisms involved in the secretion. Amino acids contribute to flavor formation; therefore, bacterial strains with this ability are relevant for the food industry.

scholarly journals Draft Genome Sequences of Klebsiella pneumoniae Strains Isolated from Immunocompromised NOD-scid Gamma Research Mice

2019 ◽  
Vol 8 (42) ◽  
Author(s):  
Anthony Mannion ◽  
Niora Fabian ◽  
Melissa Stair ◽  
Jody Dzink-Fox ◽  
Sebastian E. Carrasco ◽  
...  
Keyword(s):  
Klebsiella Pneumoniae ◽  
Draft Genome ◽  
Illumina Miseq ◽  
Genome Sequences ◽  
Pathogenic Potential ◽  
Content Type ◽  
Nsg Mice ◽  
Genes Encoding ◽  
Clinical Illness ◽  
Biomedical Research Institute

Thirteen Klebsiella pneumoniae isolates cultured from feces, intestines, liver, lungs, and blood from immunocompromised NOD-scid gamma (NSG) mice with clinical illness, housed at a biomedical research institute, were sequenced using Illumina MiSeq technology for elucidation of pathogenic potential and genes encoding antibiotic resistance.

scholarly journals Draft Genome Sequences of Two Novel Salmonella enterica subsp. enterica Strains Isolated from Low-Moisture Foods with Applications in Food Safety Research

2018 ◽  
Vol 6 (13) ◽  
Author(s):  
Devon R. Radford ◽  
Carlos G. Leon-Velarde ◽  
Shu Chen ◽  
Amir M. Hamidi Oskouei ◽  
Sampathkumar Balamurugan
Keyword(s):  
Salmonella Enterica ◽  
De Novo ◽  
Draft Genome ◽  
Illumina Miseq ◽  
Consensus Method ◽  
Genome Sequences ◽  
Content Type ◽  
Illumina Miseq Platform ◽  
Safety Research ◽  
Miseq Platform

ABSTRACT The genomes of two strains of Salmonella enterica subsp. enterica serovar Cubana and serovar Muenchen, isolated from dry hazelnuts and chia seeds, respectively, were sequenced using the Illumina MiSeq platform, assembled de novo using the overlap-layout-consensus method, and aligned to their respective most identical sequence genome scaffolds using MUMMER and BLAST searches.

scholarly journals Draft Genome Sequences of Four Lactococcus lactis Strains Isolated from Diverse Niches, Including Dairy Products, Grass, and Green Peas

2019 ◽  
Vol 8 (35) ◽  
Author(s):  
Desirée Roman Naranjo ◽  
Michael Callanan ◽  
Olivia McAuliffe
Keyword(s):  
Lactococcus Lactis ◽  
Dairy Products ◽  
Draft Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Fermented Dairy Products ◽  
Fermented Dairy ◽  
Green Peas

Lactococcus lactis has been used for millennia as a starter organism in the production of many fermented dairy products. This announcement includes the draft genome sequences of four strains of Lactococcus lactis, two of dairy origin and two from nondairy sources.

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