scholarly journals Draft Genome Sequence of Escherichia coli DSM 12242, a Highly Efficient Host Strain for the Isolation of Somatic Coliphages

2019 ◽  
Vol 8 (38) ◽  
Author(s):  
Cátia Pacífico ◽  
Dmitrij Sofka ◽  
João André Carriço ◽  
Friederike Hilbert
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Host Strain ◽  
Draft Genome Sequence ◽  
Clinical Samples ◽  
Content Type ◽  
Somatic Coliphages ◽  
Commercial Strain

Here, we report the draft genome sequence and characterization of the commercial strain Escherichia coli DSM 12242 (=ATCC 13706/60 =NZRM 3262) derived from strain C (ATCC 13706), which is suitable for the isolation of coliphages from environmental and clinical samples.

scholarly journals Draft Genome Sequence of an Escherichia coli Sequence Type 410 Isolate Harboring blaNDM-5 Genes with gyrA and parE Mutations, Isolated from Urine Culture in China

2019 ◽  
Vol 8 (50) ◽  
Author(s):  
Junwei Huang ◽  
Shanshan Ma ◽  
Qian Yu ◽  
Miao Fu ◽  
Lingli Shao
Keyword(s):  
Escherichia Coli ◽  
High Risk ◽  
Clinical Isolate ◽  
Genome Sequence ◽  
Urine Culture ◽  
Draft Genome ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Content Type

Escherichia coli sequence type 410 (ST410) is now an international high-risk clone and is responsible for a large number of clinical infections. Here, we report the draft genome sequence of an ST410 clinical isolate harboring multiple bla NDM-5 genes that was obtained from urine culture in China.

scholarly journals Draft Genome Sequence of an Escherichia coli Sequence Type 420 Isolate from a Patient with Urinary Tract Infection in Northern California

2020 ◽  
Vol 9 (23) ◽  
Author(s):  
Yusuke Matsui ◽  
Yuan Hu ◽  
Nicole J. Tarlton ◽  
Lee W. Riley
Keyword(s):  
Escherichia Coli ◽  
Urinary Tract Infection ◽  
Urinary Tract ◽  
Tract Infection ◽  
Genome Sequence ◽  
Draft Genome ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Northern California ◽  
Content Type

ABSTRACT The genome sequence of a uropathogenic Escherichia coli sequence type 420 strain isolated from a patient with urinary tract infection in northern California is described here. The draft genome sequence includes a 4.8-Mb chromosome, accompanied by a 114-kb plasmid containing IncFIB/IncFII/Col156 and a 35-kb plasmid containing IncN3.

scholarly journals Draft Genome Sequence of the First NDM-4-Producing Escherichia coli Strain (AK1), Isolated from Sewage Water of a North Indian Hospital

2017 ◽  
Vol 5 (50) ◽  
Author(s):  
Asad U. Khan ◽  
Ayesha Z. Beg ◽  
Praveen K. Verma
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Sewage Water ◽  
Coli Strain ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT We report here the draft genome sequence of the first isolated NDM-4-producing Escherichia coli strain, isolated from sewage water at a North Indian hospital. The genome has an assembly size of 5,076,053 bp, arranged in 129 contigs, with 5,271 genes and a G+C content of 50.47%.

scholarly journals Draft Genome Sequence of Escherichia coli W26, an Enteric Strain Isolated from Cow Feces

2012 ◽  
Vol 194 (18) ◽  
pp. 5149-5150 ◽  
Author(s):  
Mincheol Kim ◽  
Hana Yi ◽  
Yong-Joon Cho ◽  
Jeonghwan Jang ◽  
Hor-Gil Hur ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
South Korea ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Enteric Bacterium ◽  
Content Type ◽  
E Coli

ABSTRACTAn enteric bacterium,Escherichia coliW26 (KACC 16630), was isolated from feces from a healthy cow in South Korea. Here, we report the draft genome sequence of the isolate, which is closely affiliated with commensal strains belonging toE. coliphylogroup B1.

scholarly journals Draft Genome Sequence of a Canine Uropathogenic Escherichia coli Strain Isolated in New Zealand

2019 ◽  
Vol 8 (10) ◽  
Author(s):  
Vuong V. H. Le ◽  
Ian Bruce ◽  
Patrick J. Biggs ◽  
Jasna Rakonjac
Keyword(s):  
Escherichia Coli ◽  
New Zealand ◽  
Genome Sequence ◽  
Draft Genome ◽  
Coli Strain ◽  
Uropathogenic Escherichia Coli ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Tract Infections ◽  
Human Infections

Escherichia coli P50 is a canine uropathogenic isolate sampled in the Wellington region of New Zealand. We report the draft genome sequence of this isolate, which contains characteristic virulence genes for urinary tract infections and is predicted to be capable of causing human infections.

scholarly journals Draft Genome Sequence of Escherichia coli Phage CMSTMSU, Isolated from Shrimp Farm Effluent Water

2018 ◽  
Vol 7 (14) ◽  
Author(s):  
Lelin Chinnadurai ◽  
Thirumalaikumar Eswaramoorthy ◽  
Abinaya Paramachandran ◽  
Sayan Paul ◽  
Rashmi Rathy ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Pseudomonas Aeruginosa ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Effluent Water ◽  
Fish Pathogen ◽  
Content Type ◽  
Shrimp Farm ◽  
Escherichia Coli Phage

The Escherichia coli phage CMSTMSU was isolated from shrimp farm effluent water in Ramanathapuram, India. The phage exhibited lytic activity against both E. coli and the fish pathogen Pseudomonas aeruginosa.

scholarly journals Draft Genome Sequence of Enterohemorrhagic Escherichia coli O157:H7 Strain MC2 Isolated from Cattle in France

2017 ◽  
Vol 5 (40) ◽  
Author(s):  
Pauline Auffret ◽  
Audrey Segura ◽  
Yolande Bertin ◽  
Christophe Klopp ◽  
Olivier Bouchez ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Foodborne Pathogen ◽  
Enterohemorrhagic Escherichia Coli ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Protein Encoding ◽  
Encoding Genes ◽  
Rna Genes

ABSTRACT Enterohemorrhagic Escherichia coli (EHEC) with serotype O157:H7 is a major foodborne pathogen. Here, we report the draft genome sequence of EHEC O157:H7 strain MC2 isolated from cattle in France. The assembly contains 5,400,376 bp that encoded 5,914 predicted genes (5,805 protein-encoding genes and 109 RNA genes).

scholarly journals Draft Genome Sequence of Escherichia coli KL53

2018 ◽  
Vol 6 (13) ◽  
Author(s):  
Katarina Soltys ◽  
Silvia Vavrova ◽  
Jaroslav Budis ◽  
Lenka Palkova ◽  
Gabriel Minarik ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Clinical Isolate ◽  
Genome Sequence ◽  
De Novo ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Tellurite Resistance ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

ABSTRACT Here, we report the draft genome sequence of a clinical isolate of the uropathogenic strain Escherichia coli KL53. A total of 5,083,632 bp was de novo assembled into 170 contigs containing 89 RNAs and 5,034 protein-coding genes. Remarkable is the presence of the tellurite resistance ( ter ) operon on a plasmid.

scholarly journals Draft Genome Sequence of a Multidrug-Resistant Escherichia coli Sequence Type 1193 Pandemic Clone Isolated from Wastewater in Austria

2021 ◽  
Vol 10 (37) ◽  
Author(s):  
Adriana Cabal ◽  
Nadine Peischl ◽  
Gerhard Rab ◽  
Anna Stöger ◽  
Burkhard Springer ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Treatment Plant ◽  
Multidrug Resistant ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Fluoroquinolone Resistance ◽  
Content Type ◽  
E Coli

Extraintestinal Escherichia coli sequence type 1193 (ST1193) is an important source of fluoroquinolone resistance, which has emerged in recent years. We report the first draft genome sequence and annotation of a multidrug-resistant E. coli ST1193 strain obtained from a wastewater treatment plant in Austria.

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