scholarly journals Complete Genome Sequences of Staphylococcus argenteus Tokyo13064 and Tokyo13069, Isolated from Specimens Obtained during a Food Poisoning Outbreak in Tokyo, Japan

2021 ◽  
Vol 10 (10) ◽  
Author(s):  
Yasunori Suzuki ◽  
Hiroaki Kubota ◽  
Tsutomu Kakuda ◽  
Shinji Takai ◽  
Kenji Sadamasu
Keyword(s):  
Dna Sequences ◽  
Genome Annotation ◽  
Complete Genome ◽  
Food Poisoning ◽  
Human Feces ◽  
Genome Sequences ◽  
Content Type ◽  
Circular Chromosomes

ABSTRACT The complete genome sequences of two Staphylococcus argenteus strains, Tokyo13064 and Tokyo13069, isolated from human feces and suspected causative foods during a staphylococcal food poisoning outbreak, consist of 2,750,811-bp and 2,751,556-bp circular chromosomes and 2,543 and 2,548 genome annotation-predicted coding DNA sequences, respectively, with 19 rRNAs, 61 tRNAs, and 1 CRISPR each.

scholarly journals Complete Genome Sequences of Plasmid-Bearing Campylobacter coli and Campylobacter jejuni Strains Isolated from Retail Chicken Liver

2017 ◽  
Vol 5 (49) ◽  
Author(s):  
Daya Marasini ◽  
Mohamed K. Fakhr
Keyword(s):  
Campylobacter Jejuni ◽  
Complete Genome ◽  
Chicken Liver ◽  
Campylobacter Coli ◽  
Genome Sequences ◽  
Content Type ◽  
Circular Chromosomes

ABSTRACT Complete genome sequences of Campylobacter coli strains WA333, YF2105, BG2108, MG1116, and BP3183 and Campylobacter jejuni strain IF1100 isolated from retail chicken liver showed the presence of 1,841,551-, 1,687,232-, 1,695,638-, 1,665,146-, 1,695,360-, and 1,744,171-bp circular chromosomes, respectively. These isolates also contained plasmids ranging in size from 5,209 to 55,122 bp.

scholarly journals Complete Genome Sequences of Campylobacter jejuni Strains Isolated from Retail Chicken and Chicken Gizzards

2017 ◽  
Vol 5 (47) ◽  
Author(s):  
Daya Marasini ◽  
Mohamed K. Fakhr
Keyword(s):  
Campylobacter Jejuni ◽  
Complete Genome ◽  
Tetracycline Resistance ◽  
Type Iv Secretion ◽  
Secretion Systems ◽  
Genome Sequences ◽  
Content Type ◽  
Type Iv ◽  
Resistance Plasmids ◽  
Circular Chromosomes

ABSTRACT Genome sequences of Campylobacter jejuni FJ3124 and ZP3204 isolated from retail chicken gizzards and Campylobacter jejuni TS1218 isolated from retail chicken showed the presence of 1,694,324-, 1,763,161-, and 1,762,596-bp circular chromosomes, respectively. Campylobacter jejuni ZP3204 and TS1218 harbored large tetracycline resistance plasmids with type IV secretion systems.

scholarly journals Complete Genome Sequences of Lactobacillus curvatus KG6, L. curvatus MRS6, and Lactobacillus sakei FAM18311, Isolated from Fermented Meat Products

2017 ◽  
Vol 5 (38) ◽  
Author(s):  
Christoph Jans ◽  
Sandra Lagler ◽  
Christophe Lacroix ◽  
Leo Meile ◽  
Marc J. A. Stevens
Keyword(s):  
Real Time ◽  
Single Molecule ◽  
Complete Genome ◽  
Meat Products ◽  
Lactobacillus Sakei ◽  
Lactobacillus Curvatus ◽  
Genome Sequences ◽  
Content Type ◽  
Circular Chromosomes

ABSTRACT The genomes of Lactobacillus curvatus KG6, L. curvatus MRS6, and Lactobacillus sakei FAM18311 were sequenced and assembled using PacBio single-molecule real-time (SMRT) technology. The strains were isolated from Swiss fermented meat products. Circular chromosomes were of 1.98 Mbp (KG6), 2.11 Mbp (MRS6), and 1.95 Mbp (FAM18311), with a G+C content of 41.3 to 42.0%.

scholarly journals Complete Genome Sequences of a Diverse Group of 13 Propionibacterium acnes Bacteriophages Isolated from Urban Raw Sewage

2018 ◽  
Vol 6 (26) ◽  
Author(s):  
Gustavo Ybazeta ◽  
Jenna Graham ◽  
Jelena Trifkovic ◽  
Lyne Giroux ◽  
Mazen Saleh ◽  
...  
Keyword(s):  
Dna Sequences ◽  
Complete Genome ◽  
Propionibacterium Acnes ◽  
Diverse Group ◽  
Genome Sequences ◽  
Content Type ◽  
The Family

We present complete genome sequences of 13 Propionibacterium acnes phages isolated from urban raw sewage. They belong to the family Siphoviridae, have genome sizes of 29,450.6 ± 256.5 nucleotides and G+C contents of 54.14% ± 0.22% and contain 42 to 45 coding DNA sequences (CDS).

scholarly journals Complete Genome Sequences of Allofrancisella inopinata SYSU YG23 and Allofrancisella frigidaquae SYSU 10HL1970, Isolated from Water from Cooling Systems in China

2020 ◽  
Vol 9 (48) ◽  
Author(s):  
Caroline Öhrman ◽  
Ingrid Uneklint ◽  
Linda Karlsson ◽  
Daniel Svensson ◽  
Mats Forsman ◽  
...  
Keyword(s):  
Francisella Tularensis ◽  
Causative Agent ◽  
Complete Genome ◽  
Genome Sequences ◽  
Cooling Systems ◽  
Content Type ◽  
Complete Sequences ◽  
Circular Chromosomes ◽  
Type Strains

ABSTRACT Near neighbors to the causative agent of tularemia, Francisella tularensis, isolated from diverse sources, have been reported in recent years. In this announcement, we present the complete sequences of circular chromosomes of one of the closest neighboring genera of Francisella (i.e., the type strains of Allofrancisella inopinata and Allofrancisella frigidaquae).

scholarly journals Complete Genome Sequences of Six Salmonella enterica Serovar 4,[5],12:i:– Isolates from Canada

2020 ◽  
Vol 9 (24) ◽  
Author(s):  
Matthew Walker ◽  
Chrystal Landgraff ◽  
Clifford Clark
Keyword(s):  
Salmonella Enterica ◽  
Complete Genome ◽  
Food Poisoning ◽  
Human Pathogen ◽  
Genome Sequences ◽  
Content Type ◽  
Human Food ◽  
Serovar Typhimurium ◽  
Stool Samples ◽  
Reference Strains

ABSTRACT Salmonella enterica with antigenic formula 4,[5],12:i:– is a monophasic variant of S. enterica serovar Typhimurium that has emerged globally as a human pathogen over the last 3 decades. We describe the closed genomes and plasmids from six S. enterica 4,[5],12:i:– isolates recovered from stool samples obtained during investigation of human food poisoning cases reported to PulseNet Canada that are suitable for use as reference strains.

scholarly journals Complete Genome Sequences of Pseudomonas lundensis Strains M101 and M105, Isolated from 1% Pasteurized Milk

2021 ◽  
Vol 10 (42) ◽  
Author(s):  
Keerthikka Ravi ◽  
John R. Erb-Downward ◽  
Natalie K. Gammon ◽  
Nicole R. Falkowski ◽  
Gary B. Huffnagle
Keyword(s):  
Complete Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Pasteurized Milk ◽  
Long Read ◽  
Circular Chromosomes

Here, we report the complete genome sequences of two strains of Pseudomonas lundensis , M101 and M105, which were isolated from 1% pasteurized milk. Long-read sequencing was performed using a MinION sequencer, and reads were assembled into circular chromosomes of 4,842,187 bp and 4,814,486 bp for M101 and M105, respectively. Both strains had additional plasmid sequences.

scholarly journals Complete Genome Sequences of Two Nosocomiicoccus ampullae Strains and a Growth-Adapted Mutant

2021 ◽  
Vol 10 (50) ◽  
Author(s):  
Christopher F. Schuster ◽  
Frank Sommer ◽  
Birgit Strommenger ◽  
Guido Werner ◽  
Franziska Layer
Keyword(s):  
Complete Genome ◽  
Type Strain ◽  
Iron Availability ◽  
Genome Sequences ◽  
Content Type ◽  
Circular Chromosomes

Here, we present the circular and complete genome sequences of the Nosocomiicoccus ampullae isolate 19-00310 and type strain DSM 19163. To our knowledge, these represent the first complete, circular chromosomes in the entire genus. Sequencing of a growth-adapted mutant suggests iron availability as a factor for growth improvement.

scholarly journals Complete Genome Sequences of Walnut-Associated Xanthomonas euroxanthea Strains CPBF 367 and CPBF 426 Obtained by Illumina/Nanopore Hybrid Assembly

2020 ◽  
Vol 9 (45) ◽  
Author(s):  
Miguel Teixeira ◽  
Leonor Martins ◽  
Camila Fernandes ◽  
Cátia Chaves ◽  
Joana Pinto ◽  
...  
Keyword(s):  
Complete Genome ◽  
Whole Genome ◽  
Hybrid Assembly ◽  
Genome Sequences ◽  
Content Type ◽  
Walnut Tree ◽  
Species Specific ◽  
Circular Chromosomes

ABSTRACT We present the complete genome sequences of two Xanthomonas euroxanthea strains isolated from buds of a walnut tree. The whole-genome sequences of strains CPBF 367 and CPBF 426 consist of two circular chromosomes of 4,923,218 bp and 4,883,254 bp and two putative plasmids of 45,241 bp and 17,394 bp, respectively. These data may contribute to the understanding of Xanthomonas species-specific adaptations to walnut.

scholarly journals Complete Genome Sequences of Two Corynebacterium macginleyi Strains Isolated from Infectious Keratitis

2021 ◽  
Vol 10 (17) ◽  
Author(s):  
Susanna Sagerfors ◽  
Anja Poehlein ◽  
Bo Söderquist ◽  
Holger Brüggemann
Keyword(s):  
Complete Genome ◽  
Repetitive Elements ◽  
Infectious Keratitis ◽  
Genome Sequences ◽  
Content Type ◽  
Ocular Infections ◽  
Circular Chromosomes ◽  
Slow Growing

ABSTRACT Corynebacterium macginleyi is a slow-growing, lipid-requiring bacterium that may cause ocular infections. Here, we report the complete genome sequences of two strains, T160811 and T180208, isolated from infectious keratitis. The two genomes consist of circular chromosomes of 2,431,961 bp and 2,481,998 bp, respectively, and contain high numbers of repetitive elements.

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