Theoretical study of metallasilatranes; Bonding nature and prediction of new metallasilatrane

2011 ◽  
Vol 76 (5) ◽  
pp. 619-629 ◽  
Author(s):  
Shigeyoshi Sakaki ◽  
Daisuke Kawai ◽  
Shinya Tsukamoto

The new bond between Pt atom and hypervalent six-coordinate Si species in platinum-silatrane reported recently was theoretically investigated mainly with DFT method and in part with MP2 method. The DFT method with B3PW91 and M06 functionals reproduces well the Pt–Si, Pt–Cl and Si–N bond distances. Though the Si–Cl distance is overestimated by all functionals employed here when one d polarization function is added to each of Si and Cl, the M06-optimized Si–Cl distance is close to the experimental value when two d polarization functions are added to each of Si and Cl, suggesting that the functional and basis sets must be carefully employed in theoretical calculation of hypervalnet six-coordinate Si species. Population analysis clearly indicates that the Pt–Si bond is formed by the charge-transfer (CT) from the occupied dσ orbital of Pt to the empty p orbital of Si, which enhances the CT from the S atoms and Cl ligand to the Pt center. Besides platinum- and palladium-silatranes, no metallasilatrane has been reported so far. Based on the knowledge of bonding nature, we presented theoretical prediction that iridium(I) can form a similar metallasilatrane. Actually, the DFT calculation indicates that iridium-silatrane has essentially the same equilibrium geometry and bonding nature as those of platinum-silatrane.

2021 ◽  
Vol 9 (2) ◽  
pp. 94-107
Author(s):  
Akin Azizoglu ◽  
◽  
Zuleyha Ozer ◽  
Carikci Sema ◽  
Turgut Kilic ◽  
...  

Sideroxol, a kaurene diterpene, was obtained from the acetone extract of Sideritis stricta plant. The ground-state molecular geometry, vibrational frequencies, and NMR chemical shifts were also investigated by using various density functional theories and Pople basis sets. The computed geometries are in good conformity with the experimental data. The comparison between theory and experiments indicates that B3LYP and M06 methods with the 6-31G(d) basis set are able to provide satisfactory results for predicting vibrational and NMR properties. There seems to be no significant effect of addition of diffuse and polarization functions in the basis set used herein.


2010 ◽  
Vol 8 (4) ◽  
pp. 913-918 ◽  
Author(s):  
Ahmad Seif ◽  
Temer Ahmadi

AbstractThe geometrical structure, the nuclear magnetic resonance (NMR) parameters and natural population analysis (NPA) of the H-capped (raw) and Li-capped armchair single-walled gallium nitride nanotubes (GaNNTs) are computed and reported for the first time. Our results show that the variation of isotropic chemical shielding (ICS) parameters at the sites of 15N and 71Ga along the length of both models-raw and Li-capped- are reversed. The calculations were carried out with B3LYP-DFT method and 6–31G (d) standard basis sets using the Gaussian 03 suite of programs.


2016 ◽  
Vol 18 (35) ◽  
pp. 24176-24184 ◽  
Author(s):  
Yu Gao ◽  
Shitong Zhang ◽  
Yuyu Pan ◽  
Liang Yao ◽  
Haichao Liu ◽  
...  

Gradual evolution of hybridization process between the LE and CT states is investigated in a series of TPA–PI (HxVy) derivatives by TD-DFT method.


1975 ◽  
Vol 28 (9) ◽  
pp. 2069 ◽  
Author(s):  
L Radom ◽  
III HF Schaefer

The equilibrium geometry of the SF4 molecule has been investigated by means of ab initio electronic structure theory. Self-consistent-field (SCF) calculations employing a minimum basis set (MBS) incorrectly predict SF4 to have a square- pyramidal (C4V) structure. The correct qualitative prediction of a C2V geometry is obtained with a basis of nearly double zeta quality. Comparable calculations on H2S and SF2 suggest that it may only be for hypervalent molecules containing sulphur that minimum basis sets are inappropriate. However, polarization functions seem to be necessary for an accurate prediction of S-F bond distances.


2022 ◽  
pp. 1-19
Author(s):  
Ziba Tavakoli ◽  
Masoome Sheikhi ◽  
Siyamak Shahab ◽  
Sadegh Kaviani ◽  
Batool Sheikhi ◽  
...  

In this research, a DFT calculation was performed for study to investigate the encapsulation of the anticancer drug Ibrance into CNT(8,8-7) by using M062X/6-311G * level of theory in the solvent water. TD-DFT method was used to compute the electronic spectra of the Ibrance drug, CNT(8,8-7) and complex CNT(8,8-7)/Ibrance in aqueous medium for the study of non-bonded interaction effect. The non-bonded interaction effects of Ibrance drug with CNT(8,8-7) on the electronic properties and natural charges have been also studied. The results display the change in title parameters after process adsorption. According to NBO results, the molecule Ibrance and CNT(8,8-7) play as both electron donor and acceptor at the complex CNT(8,8-7)/Ibrance. Charge transfer, on the other hand, occurs between the bonding, antibonding, or nonbonding orbitals of Ibrance drug and CNT (8,8-7). According to QTAIM analysis and the LOL and ELF values, all intermolecular bonds in the complex are non-covalent in nature. As a result, CNT(8,8-7) can be thought of as a drug delivery system for transporting Ibrance as an anticancer drug within biological systems.


2019 ◽  
Vol 892 ◽  
pp. 1-7
Author(s):  
Pek Lan Toh ◽  
Montha Meepripruk ◽  
Rosfayanti Rasmidi

In this paper, a first principle Density Functional Theory (DFT) method was conducted to study the geometric and electronic structures of 1-(4-chlorophenyl)-2-{[5-(4-chlorophenyl) -1,3,4-oxadiazol-2-yl] sulfanyl} ethanone, C16H10Cl2N2O2S. Using B3LYP level of theory with four basis sets of 6-31G**, 6-31++G**, 6-311G**, and 6-311++G**, the equilibrium structure of the title molecule was used to determine the total energies, Frontier molecular orbital’s energies, Mulliken atomic charges, and others. The computed findings present that four total energies obtained are close to each other, with the corresponding values of-59716.06 eV, -59709.42 eV, -59708.56 eV, and-59716.51 eV, respectively for B3LYP/6-31G**, B3LYP/6-31++G**, B3LYP/6-311G**, and B3LYP/6-311++G** methods. The calculated HOMO-LUMO energy gaps were predicted in the range of 4.001 eV - 4.089 eV. In this study, the atomic charge values of molecular system were also determined using Mulliken Population Analysis (MPA) approach. For DFT/B3LYP/6-311G** level of calculation, the computed results show that the atom of C8 accommodates the highest negative charge in the title molecular system. All the oxygen, nitrogen, and chloride atoms are having negative charges, whereas all the hydrogen atoms are having positive charges. In addition, the dipole moment value was also determined to be 1.4758 Debye by employing DFT/B3LYP/6-311G** level of theory.


2017 ◽  
Vol 119 ◽  
pp. 325-331 ◽  
Author(s):  
Hadi J.M. Al-Agealy ◽  
Taif Saad Al Maadhede ◽  
B. Al Shafaay ◽  
Raad H. Mjeed ◽  
Ahmed M. Ashweik

2014 ◽  
Vol 12 (2) ◽  
pp. 153-163
Author(s):  
Viktor Anishchenko ◽  
Vladimir Rybachenko ◽  
Konstantin Chotiy ◽  
Andrey Redko

AbstractDFT calculations of vibrational spectra of chlorophosphates using wide range of basis sets and hybrid functionals were performed. Good agreement between calculated and experimental vibrational spectra was reached by the combination of non-empirical functional PBE0 with both middle and large basis sets. The frequencies of the stretching vibrations of the phosphate group calculated using semi-empirical functional B3LYP for all basis sets deviate significantly from the experimental values. The number of polarization functions on heavy atoms was shown to be a key factor for the calculation of vibrational frequencies of organophosphates. The importance of consideration of all the stable rotamers for a complete assignment of fundamental modes was shown.


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