Information-Geometric Measures for Estimation of Connection Weight Under Correlated Inputs

2012 ◽  
Vol 24 (12) ◽  
pp. 3213-3245 ◽  
Author(s):  
Yimin Nie ◽  
Masami Tatsuno

The brain processes information in a highly parallel manner. Determination of the relationship between neural spikes and synaptic connections plays a key role in the analysis of electrophysiological data. Information geometry (IG) has been proposed as a powerful analysis tool for multiple spike data, providing useful insights into the statistical interactions within a population of neurons. Previous work has demonstrated that IG measures can be used to infer the connection weight between two neurons in a neural network. This property is useful in neuroscience because it provides a way to estimate learning-induced changes in synaptic strengths from extracellular neuronal recordings. A previous study has shown, however, that this property would hold only when inputs to neurons are not correlated. Since neurons in the brain often receive common inputs, this would hinder the application of the IG method to real data. We investigated the two-neuron-IG measures in higher-order log-linear models to overcome this limitation. First, we mathematically showed that the estimation of uniformly connected synaptic weight can be improved by taking into account higher-order log-linear models. Second, we numerically showed that the estimation can be improved for more general asymmetrically connected networks. Considering the estimated number of the synaptic connections in the brain, we showed that the two-neuron IG measure calculated by the fourth- or fifth-order log-linear model would provide an accurate estimation of connection strength within approximately a 10% error. These studies suggest that the two-neuron IG measure with higher-order log-linear expansion is a robust estimator of connection weight even under correlated inputs, providing a useful analytical tool for real multineuronal spike data.

2012 ◽  
Vol 66 (1) ◽  
pp. 99-113 ◽  
Author(s):  
Wei Li ◽  
Jinling Wang

To improve the computational efficiency and dynamic performance of low cost Inertial Measurement Unit (IMU)/magnetometer integrated Attitude and Heading Reference Systems (AHRS), this paper has proposed an effective Adaptive Kalman Filter (AKF) with linear models; the filter gain is adaptively tuned according to the dynamic scale sensed by accelerometers. This proposed approach does not need to model the system angular motions, avoids the non-linear problem which is inherent in the existing methods, and considers the impact of the dynamic acceleration on the filter. The experimental results with real data have demonstrated that the proposed algorithm can maintain an accurate estimation of orientation, even under various dynamic operating conditions.


2019 ◽  
Vol 10 (1) ◽  
pp. 30-50
Author(s):  
Thi Mui Pham ◽  
Maria Kateri

Tools of algebraic statistics combined with MCMC algorithms have been used in contingency table analysis for model selection and model fit testing of log-linear models. However, this approach has not been considered so far for association models, which are special log-linear models for tables with ordinal classification variables. The simplest association model for two-way tables, the uniform (U) association model, has just one parameter more than the independence model and is applicable when both classification variables are ordinal. Less parsimonious are the row (R) and column (C) effect association models, appropriate when at least one of the classification variables is ordinal. Association models have been extended for multidimensional contingency tables as well. Here, we adjust algebraic methods for association models analysis and investigate their eligibility, focusing mainly on two-way tables. They are implemented in the statistical software R and illustrated on real data tables. Finally the algebraic model fit and selection procedure is assessed and compared to the asymptotic approach in terms of a simulation study.


Author(s):  
Azad SHOKRI ◽  
Ali AKBARI-SARI ◽  
Mahboubeh BAYAT ◽  
Mahmoud KHODADOST ◽  
Abbas RAHIMI FOROUSHANI ◽  
...  

Background: Accurate estimation of active general practitioners (GPs) is a concern for health authorities to estimate requirements. This study aimed to accurately estimate GPs active supply in Iran using three sources capture-recapture (CRC) method. Methods: This cross-sectional study collected data during 2015-2016, targeting all GPs registered in three independent data sources; a national survey from all hospitals, database of human resource management office at health ministry and physicians' offices databank. Variables including medical council codes, GP names, surnames and national ID codes were used for data linkage among the three sources. Three sources CRC method was applied using log-linear models to estimate the total number of active GPs in STATA software. Results: Overall, 27,048 GPs were identified after removing the duplicate records. Based on CRC three sources data, the total number of GPs were 53,630 in 2015-2016. Distribution of GPs per 1,000 population among the provinces indicates that provinces of Kohgiluyeh & Boyer Ahmad, Mazandaran, Golestan and Yazd with ratios of 1.28, 1.28, 1.21 and 1.17 physicians rank the highest proportion of GPs and the provinces of Sistan & Baluchestan, Ilam, Zanjan, Alborz, North Khorasan with corresponding ratios of 0.24, 0.40, 0.40, 0.43 and 0.45 GPs ranked the lowest. Conclusion: CRC method is known to be the best and rapidest method to estimate active GP due to its compatibility for the current situation of databanks in Iran. Therefore, this method is a good application in human resource distribution and planning.


1987 ◽  
Vol 26 (03) ◽  
pp. 104-108
Author(s):  
M. A. A. Moussa

SummaryThe paper focuses upon the measurement of association in two-way contingency tables, using the log-linear models and dual scaling approaches. The former comprises [1] the use of pseudo-Bayes estimators to remove zeros, [2] fitting the resulting smoothed array to all possible configurations of log-linear models, [3] fitting the quasi-independence model to detect anomalous cells that caused deviation from the null-independence model. The latter includes [1] estimation of the optimal weights that maximize the canonical correlation between the two categorical variables by an optimization iterative method, [2] testing the discriminability of the estimated scoring scheme. The two approaches were applied to a set of real data for the study of the association between maternal age at marriage and types of reproductive wastage in a sampling survey conducted in the population of female nurses in Kuwait.


2000 ◽  
Vol 12 (11) ◽  
pp. 2621-2653 ◽  
Author(s):  
Laura Martignon ◽  
Gustavo Deco ◽  
Kathryn Laskey ◽  
Mathew Diamond ◽  
Winrich Freiwald ◽  
...  

Recent advances in the technology of multiunit recordings make it possible to test Hebb's hypothesis that neurons do not function in isolation but are organized in assemblies. This has created the need for statistical approaches to detecting the presence of spatiotemporal patterns of more than two neurons in neuron spike train data. We mention three possible measures for the presence of higher-order patterns of neural activation—coefficients of log-linear models, connected cumulants, and redundancies—and present arguments in favor of the coefficients of log-linear models. We present test statistics for detecting the presence of higher-order interactions in spike train data by parameterizing these interactions in terms of coefficients of log-linear models. We also present a Bayesian approach for inferring the existence or absence of interactions and estimating their strength. The two methods, the frequentist and the Bayesian one, are shown to be consistent in the sense that interactions that are detected by either method also tend to be detected by the other. A heuristic for the analysis of temporal patterns is also proposed. Finally, a Bayesian test is presented that establishes stochastic differences between recorded segments of data. The methods are applied to experimental data and synthetic data drawn from our statistical models. Our experimental data are drawn from multiunit recordings in the prefrontal cortex of behaving monkeys, the somatosensory cortex of anesthetized rats, and multiunit recordings in the visual cortex of behaving monkeys.


2019 ◽  
Vol 10 (1) ◽  
pp. 13-29 ◽  
Author(s):  
Cristiano Bocci ◽  
Fabio Rapallo

In this work we define log-linear models to compare several square contingency tables under the quasi-independence or the quasi-symmetry model, and the relevant Markov bases are theoretically characterized. Through Markov bases, an exact test to evaluate if two or more tables fit a common model is introduced. Two real-data examples illustrate the use of these models in different fields of applications.


2015 ◽  
Author(s):  
Jacob Andreas ◽  
Dan Klein
Keyword(s):  

Sign in / Sign up

Export Citation Format

Share Document