scholarly journals Molecular phylogenetic analysis of the Paguristes tortugae Schmitt, 1933 complex and selected other Paguroidea (Crustacea: Decapoda: Anomura)

Zootaxa ◽  
2021 ◽  
Vol 4999 (4) ◽  
pp. 301-324
Author(s):  
CATHERINE W. CRAIG ◽  
DARRYL L. FELDER
Keyword(s):  
Phylogenetic Analysis ◽  
Species Complex ◽  
Morphological Characters ◽  
Undescribed Species ◽  
Mtdna Sequences ◽  
Approximately Unbiased ◽  
Western Atlantic ◽  
Family Level ◽  
Molecular Phylogenetic ◽  
Similarities And Differences

Morphological characters, as presently applied to describe members of the Paguristes tortugae Schmitt, 1933 species complex, appear to be of limited value in inferring phylogenetic relationships within the genus, and may have similarly misinformed understanding of relationships between members of this complex and those presently assigned to the related genera Areopaguristes Rahayu & McLaughlin, 2010 and Pseudopaguristes McLaughlin, 2002. Previously undocumented observations of similarities and differences in color patterns among populations additionally suggest genetic divergences within some species, or alternatively seem to support phylogenetic groupings of some species. In the present study, a Maximum Likelihood (ML) phylogenetic analysis was undertaken based on the H3, 12S mtDNA, and 16S mtDNA sequences of 148 individuals, primarily representatives of paguroid species from the western Atlantic. This molecular analysis supported a polyphyletic Diogenidae Ortmann, 1892, although incomplete taxonomic sampling among the genera of Diogenidae limits the utility of this finding for resolving family level relationships. Several hypotheses regarding the evolutionary relationships among hermit crab genera were refuted by the Kishino-Hasegawa (KH). Shimodaira-Hasegawa (SH) and Approximately Unbiased (AU) tree topology tests, among them the hypothesis that Areopaguristes is monophyletic. A lack of support for the monophyly of Areopaguristes calls into question the phylogenetic validity of gill number for the differentiation of Paguristes, Areopaguristes, and Pseudopaguristes. The study was inconclusive with regard to the relationships among these three genera, but previously unknown diversity within both Paguristes and Areopaguristes was demonstrated. Existence of an undescribed species confounded under the name Paguristes tortugae Schmitt, 1933 was supported by genetics, morphology, and coloration. A second undescribed species with remarkable similarity to Areopaguristes hummi Wass, 1955 was discovered based on genetics and coloration.

Poikilolaimus carsiops n. sp. (Rhabditida: Rhabditidae) associated with Neotermes koshunensis (Kalotermitidae) in Kenting National Park, Taiwan

Nematology ◽  
2011 ◽  
Vol 13 (2) ◽  
pp. 155-164 ◽  
Author(s):  
Natsumi Kanzaki ◽  
Hou-Feng Li ◽  
Yen-Chiu Lan ◽  
Hajime Kosaka ◽  
Robin M. Giblin-Davis ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
National Park ◽  
Morphological Characters ◽  
Molecular Phylogenetic Analysis ◽  
Undescribed Species ◽  
The Family ◽  
Molecular Phylogenetic ◽  
Southern Taiwan ◽  
Males And Females ◽  
Kenting National Park

Abstract During a survey of termite-associated nematodes in southern Taiwan (Kenting National Park), two species of Poikilolaimus, Poikilolaimus cf. floridensis and an undescribed species, were isolated from termites in the family Kalotermitidae. The undescribed species is morphologically observed, described and figured herein as P. carsiops n. sp. The new species is characterised by an unusual cross-shaped stomatal opening formed by two well developed dorsal and two subventral lip sectors, each with a triangular flap and two vestigial lateral lip sectors lacking a flap, and several other morphological characters. Based upon morphology and molecular phylogenetic analysis, P. carsiops n. sp. is closest to P. floridensis; i. e., these two species share a plesiomorphic regular cuticle and short tail in both males and females, and a lack of metastegostomatal teeth or denticle. In the molecular phylogenetic analysis, P. carsiops n. sp. and P. floridensis formed a well-supported clade which was clearly separated from, but monophyletic with, a clade that includes the other Poikilolaimus species. Because both P. carsiops n. sp. and P. floridensis have been isolated only from the kalotermitid termites, the P. floridensis/P. carsiops n. sp. clade is considered to be specialised with dry wood and damp wood termites (Kalotermitidae).

A new species of Scrophularia (Scrophulariaceae) from Hubei, China

Phytotaxa ◽  
2018 ◽  
Vol 350 (1) ◽  
pp. 1
Author(s):  
RUI-HONG WANG ◽  
MAO-QIN XIA ◽  
JIN-BO TAN ◽  
CHUAN CHEN ◽  
XIN-JIE JIN ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Species Delimitation ◽  
Morphological Characters ◽  
Central China ◽  
Molecular Phylogenetic Analysis ◽  
Leaf Margin ◽  
Close Relationship ◽  
Molecular Phylogenetic ◽  
A New Species

A new species, Scrophularia jinii (Scrophulariaceae), from Central China is described and illustrated. This new species was formerly misidentified as S. fargesii, from which it differs in many morphological characters. Moreover, it is distinct with all known Scrophularia species in its unique deeply double serrate leaf margin with 3–7 big teeth on each side. Molecular phylogenetic analysis further supports its species delimitation and suggests a close relationship with several Japanese and North American species.

scholarly journals Rare, deep-water and similar: revision of Sibogasyrinx (Conoidea: Cochlespiridae)

2021 ◽  
Vol 773 ◽  
pp. 19-60
Author(s):  
Yuri I. Kantor ◽  
Nicolas Puillandre
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Deep Water ◽  
Morphological Characters ◽  
Molecular Phylogenetic Analysis ◽  
Cox1 Gene ◽  
Mitochondrial Cox1 ◽  
Molecular Phylogenetic ◽  
Northern Pacific

The genus Sibogasyrinx has to date included only four species of rare deep-water Conoidea, each known from few specimens. In shell characters it strongly resembles three distantly-related genera, two of which, Comitas and Leucosyrinx, belong to a different family, the Pseudomelatomidae. A molecular phylogenetic analysis of a large amount of material of Conoidea has revealed the existence of much additional undescribed diversity within Sibogasyrinx from the central Indo-Pacific and temperate Northern Pacific. Based on partial sequences of the mitochondrial cox1 gene and morphological characters of 54 specimens, 10 species hypotheses are proposed, of which six are described as new species: S. subula sp. nov., S. lolae sp. nov., S. maximei sp. nov., S. clausura sp. nov., S. pagodiformis sp. nov. and S. elbakyanae Kantor, Puillandre & Bouchet sp. nov. One of the previously described species was absent in our material. Most of the new species are very similar and are compared to Leucosyrinx spp. Species of Sibogasyrinx are unique among Conoidea on account of the high intrageneric variability in radular morphology. Three distinct radula types are found within Sibogasyrinx, two of which are confined to highly supported subclades.

Redescription of Clubiona blesti Forster, 1979 (Araneae: Clubionidae) with a preliminary molecular phylogeny of New Zealand Clubiona

Zootaxa ◽  
2012 ◽  
Vol 3277 (1) ◽  
pp. 27 ◽  
Author(s):  
JAGOBA MALUMBRES-OLARTE ◽  
COR J. VINK
Keyword(s):  
Phylogenetic Analysis ◽  
New Zealand ◽  
Wide Distribution ◽  
Dispersal Ability ◽  
Mtdna Sequences ◽  
Limited Sample ◽  
Limited Sample Size ◽  
Geographic Structure ◽  
Molecular Phylogenetic ◽  
First Time

The New Zealand spider Clubiona blesti Forster, 1979 is redescribed, with the male described for the first time, and a pre-liminary molecular phylogenetic analysis of cytochrome c oxidase subunit I (COI) mtDNA sequences for eight species ofNew Zealand Clubiona and an outgroup from Tasmania is presented.There is considerable intraspecific variation in C. blesti, both genetic and in the morphology of copulatory organs,which may be explained by its wide distribution. The lack of a geographic structure based on consistent differences be-tween populations may suggest great dispersal ability. Given the limited sample size, further sampling and data on addi-tional genetic markers will be necessary to confirm this.The phylogenetic analysis of seven more species indicated that Clubiona cambridgei is the sister species of C. blestiand confirmed the existence of at least two monophyletic groups among the New Zealand Clubiona: species with a striped abdomen and with a spotted abdomen.

Paris lihengiana (Melanthiaceae: Parideae), a new species from Yunnan, China

Phytotaxa ◽  
2019 ◽  
Vol 392 (1) ◽  
pp. 45 ◽  
Author(s):  
ZHUN XU ◽  
NENG WEI ◽  
YING TAN ◽  
SHUAI PENG ◽  
VERONICAH MUTELE NGUMBAU ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Yunnan Province ◽  
Leaf Surface ◽  
Morphological Characters ◽  
Molecular Data ◽  
Abaxial Leaf Surface ◽  
Molecular Phylogenetic ◽  
Plastid Markers ◽  
A New Species

Paris lihengiana (Melanthiaceae), a new species from Yunnan Province, China, is described and illustrated based on evidence from morphological characters and molecular phylogeny. It differs from other species of Paris in its pubescent stem, pedicel and abaxial leaf surface, as well as other characters. Molecular phylogenetic analysis of 33 taxa in Paris was conducted based on nuclear ribosomal ITS and six plastid markers. Paris lihengiana is supported as a new species by both morphological characters and molecular data.

Redescription of Microprosthema semilaeve (von Martens, 1872) (Decapoda: Stenopodidea: Spongicolidae) and description of a new species of Microprosthema from Dry Tortugas, Florida

Zootaxa ◽  
2013 ◽  
Vol 3630 (3) ◽  
pp. 467-488 ◽  
Author(s):  
JOSEPH W. GOY ◽  
JOEL W. MARTIN
Keyword(s):  
New Species ◽  
Morphological Characters ◽  
Type Material ◽  
Undescribed Species ◽  
Western Atlantic ◽  
Dry Tortugas ◽  
Pacific Species ◽  
A New Species

Microprosthema semilaeve, a fairly common spongicolid shrimp of reefal habitats in the Western Atlantic and Caribbean is redescribed and figured based on type material and an additional 78 specimens from the majority of its known zoogeographical range. It is distinguished from the Indo-Pacific species of M. validum and an undescribed species of Microprosthema with which it has been confused in the literature by a number of morphological characters. A new species of Microprosthema from deeper waters off the Dry Tortugas and closely related to M. inornatum Manning & Chace, 1990, is described and illustrated. Microprosthema jareckii Martin, 2002 is synonymized with M. manningi Goy & Felder, 1988. A key to the Western Atlantic species of Microprosthema is presented.

scholarly journals Cretaceous origin and repeated tertiary diversification of the redefined butterflies

2011 ◽  
Vol 279 (1731) ◽  
pp. 1093-1099 ◽  
Author(s):  
Maria Heikkilä ◽  
Lauri Kaila ◽  
Marko Mutanen ◽  
Carlos Peña ◽  
Niklas Wahlberg
Keyword(s):  
Phylogenetic Analysis ◽  
Phylogenetic Relationships ◽  
Evolutionary History ◽  
Sister Group ◽  
Morphological Characters ◽  
Molecular Data ◽  
Bayesian Approaches ◽  
The Family ◽  
Family Level ◽  
Morphological And Molecular Data

Although the taxonomy of the ca 18 000 species of butterflies and skippers is well known, the family-level relationships are still debated. Here, we present, to our knowledge, the most comprehensive phylogenetic analysis of the superfamilies Papilionoidea, Hesperioidea and Hedyloidea to date based on morphological and molecular data. We reconstructed their phylogenetic relationships using parsimony and Bayesian approaches. We estimated times and rates of diversification along lineages in order to reconstruct their evolutionary history. Our results suggest that the butterflies, as traditionally understood, are paraphyletic, with Papilionidae being the sister-group to Hesperioidea, Hedyloidea and all other butterflies. Hence, the families in the current three superfamilies should be placed in a single superfamily Papilionoidea. In addition, we find that Hedylidae is sister to Hesperiidae, and this novel relationship is supported by two morphological characters. The families diverged in the Early Cretaceous but diversified after the Cretaceous–Palaeogene event. The diversification of butterflies is characterized by a slow speciation rate in the lineage leading to Baronia brevicornis , a period of stasis by the skippers after divergence and a burst of diversification in the lineages leading to Nymphalidae, Riodinidae and Lycaenidae.

Molecular phylogenetic analysis among species of Paridae, Remizidae and Aegithalos based on mtDNA sequences of COI and cyt b

Chinese Birds ◽  
2010 ◽  
Vol 1 (2) ◽  
pp. 112-123 ◽  
Author(s):  
Chuanyin Dai ◽  
Kai Chen ◽  
Ruiying Zhang ◽  
Xiaojun Yang ◽  
Zuohua Yin ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Molecular Phylogenetic Analysis ◽  
Cyt B ◽  
Mtdna Sequences ◽  
Molecular Phylogenetic

Allium xinlongense (Amaryllidaceae, Allioideae), a new species from western Sichuan

Phytotaxa ◽  
2020 ◽  
Vol 432 (3) ◽  
pp. 274-282
Author(s):  
DENG-FENG XIE ◽  
FU-MIN XIE ◽  
SHENG-BIN JIA ◽  
HAO LI ◽  
XIN YANG ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Related Species ◽  
Morphological Traits ◽  
Morphological Characters ◽  
Comprehensive Description ◽  
Western Sichuan ◽  
Molecular Phylogenetic ◽  
A New Species ◽  
Habitat Environment

Allium xinlongense from western Sichuan Province, China, is described as a new species. Its diagnostic morphological characters were confirmed to be valid by comparing them to those of related species, such as A. maowenense, A. chrysanthum, A. rude, A. xichuanense, A. chrysocephalum, and A. herderianum. Molecular phylogenetic analysis (combining ITS and rpL32-trnL markers) indicated that this new species is a member of Allium sect. Daghestanica. A comprehensive description of this new species is provided, including habitat environment and detailed morphological traits.

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