scholarly journals Biogeographic traits of dimethyl sulfide and dimethylsulfoniopropionate cycling in polar oceans

Microbiome ◽  
2021 ◽  
Vol 9 (1) ◽  
Author(s):  
Zhao-Jie Teng ◽  
Qi-Long Qin ◽  
Weipeng Zhang ◽  
Jian Li ◽  
Hui-Hui Fu ◽  
...  
Keyword(s):  
Dimethyl Sulfide ◽  
Bacterial Genome ◽  
Geographic Distance ◽  
Dispersal Limitation ◽  
The Arctic ◽  
Deep Waters ◽  
Solid Foundation ◽  
Polar Oceans ◽  
Polar Ocean ◽  
Bacterial Genes

Abstract Background Dimethyl sulfide (DMS) is the dominant volatile organic sulfur in global oceans. The predominant source of oceanic DMS is the cleavage of dimethylsulfoniopropionate (DMSP), which can be produced by marine bacteria and phytoplankton. Polar oceans, which represent about one fifth of Earth’s surface, contribute significantly to the global oceanic DMS sea-air flux. However, a global overview of DMS and DMSP cycling in polar oceans is still lacking and the key genes and the microbial assemblages involved in DMSP/DMS transformation remain to be fully unveiled. Results Here, we systematically investigated the biogeographic traits of 16 key microbial enzymes involved in DMS/DMSP cycling in 60 metagenomic samples from polar waters, together with 174 metagenome and 151 metatranscriptomes from non-polar Tara Ocean dataset. Our analyses suggest that intense DMS/DMSP cycling occurs in the polar oceans. DMSP demethylase (DmdA), DMSP lyases (DddD, DddP, and DddK), and trimethylamine monooxygenase (Tmm, which oxidizes DMS to dimethylsulfoxide) were the most prevalent bacterial genes involved in global DMS/DMSP cycling. Alphaproteobacteria (Pelagibacterales) and Gammaproteobacteria appear to play prominent roles in DMS/DMSP cycling in polar oceans. The phenomenon that multiple DMS/DMSP cycling genes co-occurred in the same bacterial genome was also observed in metagenome assembled genomes (MAGs) from polar oceans. The microbial assemblages from the polar oceans were significantly correlated with water depth rather than geographic distance, suggesting the differences of habitats between surface and deep waters rather than dispersal limitation are the key factors shaping microbial assemblages involved in DMS/DMSP cycling in polar oceans. Conclusions Overall, this study provides a global overview of the biogeographic traits of known bacterial genes involved in DMS/DMSP cycling from the Arctic and Antarctic oceans, laying a solid foundation for further studies of DMS/DMSP cycling in polar ocean microbiome at the enzymatic, metabolic, and processual levels.

scholarly journals A meta-analysis of microcosm experiments shows that dimethyl sulfide (DMS) production in polar waters is insensitive to ocean acidification

2020 ◽  
Vol 17 (1) ◽  
pp. 163-186 ◽  
Author(s):  
Frances E. Hopkins ◽  
Philip D. Nightingale ◽  
John A. Stephens ◽  
C. Mark Moore ◽  
Sophie Richier ◽  
...  
Keyword(s):  
Ocean Acidification ◽  
Regional Differences ◽  
Dimethyl Sulfide ◽  
Meta Analysis ◽  
The Arctic ◽  
Surface Ocean ◽  
Polar Oceans ◽  
Earth’S Climate ◽  
North Western ◽  
Planktonic Communities

Abstract. Emissions of dimethylsulfide (DMS) from the polar oceans play a key role in atmospheric processes and climate. Therefore, it is important to increase our understanding of how DMS production in these regions may respond to climate change. The polar oceans are particularly vulnerable to ocean acidification (OA). However, our understanding of the polar DMS response is limited to two studies conducted in Arctic waters, where in both cases DMS concentrations decreased with increasing acidity. Here, we report on our findings from seven summertime shipboard microcosm experiments undertaken in a variety of locations in the Arctic Ocean and Southern Ocean. These experiments reveal no significant effects of short-term OA on the net production of DMS by planktonic communities. This is in contrast to similar experiments from temperate north-western European shelf waters where surface ocean communities responded to OA with significant increases in dissolved DMS concentrations. A meta-analysis of the findings from both temperate and polar waters (n=18 experiments) reveals clear regional differences in the DMS response to OA. Based on our findings, we hypothesize that the differences in DMS response between temperate and polar waters reflect the natural variability in carbonate chemistry to which the respective communities of each region may already be adapted. If so, future temperate oceans could be more sensitive to OA, resulting in an increase in DMS emissions to the atmosphere, whilst perhaps surprisingly DMS emissions from the polar oceans may remain relatively unchanged. By demonstrating that DMS emissions from geographically distinct regions may vary in their response to OA, our results may facilitate a better understanding of Earth's future climate. Our study suggests that the way in which processes that generate DMS respond to OA may be regionally distinct, and this should be taken into account in predicting future DMS emissions and their influence on Earth's climate.

Historical changes in fresh water transport from sub-tropical to sub-polar oceans

2021 ◽  
Author(s):  
Taimoor Sohail ◽  
Jan Zika ◽  
Damien Irving ◽  
John Church
Keyword(s):  
Fresh Water ◽  
Climate Model ◽  
Water Cycle ◽  
Tropical Ocean ◽  
Freshwater Transport ◽  
Run Off ◽  
Polar Oceans ◽  
S Curve ◽  
Polar Ocean ◽  
Different Response

<p>Warming-induced global water cycle changes pose a significant threat to biodiversity and humanity.  The atmosphere transports freshwater from the sub-tropical ocean to the tropics and poles in two distinct branches. The resulting air-sea fluxes of fresh water and river run-off imprint on ocean salinity (S) at different temperatures (T), creating a characteristic `T-S curve' of mean salinity as a function of temperature. Using a novel tracer-percentile framework, we quantify changes in the observed T-S curve from 1970 to 2014.  The warming ocean has been characterised by freshening tropical and sub-polar oceans and salinifying sub-tropical oceans. Over the 44 year period investigated, a net poleward freshwater transport out of the sub-tropical ocean is quantified, implying an amplification of the net poleward atmospheric freshwater transport. Historical reconstructions from the 6th Climate Model Intercomparison Project (CMIP6) exhibit a different response, underestimating the peak salinification of the ocean by a factor of 4, and showing a weak freshwater transport <em>into</em> the sub-polar ocean. Results indicate this discrepancy between the observations and models may be attributed to consistently biased representations of evaporation and precipitation patterns, which lead to the the weaker amplification seen in CMIP6 models.</p>

scholarly journals Implications of sea-ice biogeochemistry for oceanic production and emissions of dimethyl sulfide in the Arctic

2017 ◽  
Vol 14 (12) ◽  
pp. 3129-3155 ◽  
Author(s):  
Hakase Hayashida ◽  
Nadja Steiner ◽  
Adam Monahan ◽  
Virginie Galindo ◽  
Martine Lizotte ◽  
...  
Keyword(s):  
Sea Ice ◽  
Water Column ◽  
Dimethyl Sulfide ◽  
Phytoplankton Bloom ◽  
Model Simulation ◽  
Field Measurements ◽  
Sulfur Cycle ◽  
The Arctic ◽  
Model Parameters ◽  
Ocean Ecosystem

Abstract. Sea ice represents an additional oceanic source of the climatically active gas dimethyl sulfide (DMS) for the Arctic atmosphere. To what extent this source contributes to the dynamics of summertime Arctic clouds is, however, not known due to scarcity of field measurements. In this study, we developed a coupled sea ice–ocean ecosystem–sulfur cycle model to investigate the potential impact of bottom-ice DMS and its precursor dimethylsulfoniopropionate (DMSP) on the oceanic production and emissions of DMS in the Arctic. The results of the 1-D model simulation were compared with field data collected during May and June of 2010 in Resolute Passage. Our results reproduced the accumulation of DMS and DMSP in the bottom ice during the development of an ice algal bloom. The release of these sulfur species took place predominantly during the earlier phase of the melt period, resulting in an increase of DMS and DMSP in the underlying water column prior to the onset of an under-ice phytoplankton bloom. Production and removal rates of processes considered in the model are analyzed to identify the processes dominating the budgets of DMS and DMSP both in the bottom ice and the underlying water column. When openings in the ice were taken into account, the simulated sea–air DMS flux during the melt period was dominated by episodic spikes of up to 8.1 µmol m−2 d−1. Further model simulations were conducted to assess the effects of the incorporation of sea-ice biogeochemistry on DMS production and emissions, as well as the sensitivity of our results to changes of uncertain model parameters of the sea-ice sulfur cycle. The results highlight the importance of taking into account both the sea-ice sulfur cycle and ecosystem in the flux estimates of oceanic DMS near the ice margins and identify key uncertainties in processes and rates that should be better constrained by new observations.

scholarly journals Uncertainties of satellite-derived surface skin temperatures in the polar oceans: MODIS, AIRS/AMSU, and AIRS only

2015 ◽  
Vol 8 (10) ◽  
pp. 4025-4041 ◽  
Author(s):  
H.-J. Kang ◽  
J.-M. Yoo ◽  
M.-J. Jeong ◽  
Y.-I. Won
Keyword(s):  
Sea Ice ◽  
The Arctic ◽  
Data Sets ◽  
High Latitudes ◽  
Ice Surface ◽  
Moderate Resolution ◽  
Microwave Sounding ◽  
Polar Oceans ◽  
Moderate Resolution Imaging Spectroradiometer ◽  
Ice Surface Temperature

Abstract. Uncertainties in the satellite-derived surface skin temperature (SST) data in the polar oceans during two periods (16–24 April and 15–23 September) 2003–2014 were investigated and the three data sets were intercompared as follows: MODerate Resolution Imaging Spectroradiometer Ice Surface Temperature (MODIS IST), the SST of the Atmospheric Infrared Sounder/Advanced Microwave Sounding Unit-A (AIRS/AMSU), and AIRS only. The AIRS only algorithm was developed in preparation for the degradation of the AMSU-A. MODIS IST was systematically warmer up to 1.65 K at the sea ice boundary and colder down to −2.04 K in the polar sea ice regions of both the Arctic and Antarctic than that of the AIRS/AMSU. This difference in the results could have been caused by the surface classification method. The spatial correlation coefficient of the AIRS only to the AIRS/AMSU (0.992–0.999) method was greater than that of the MODIS IST to the AIRS/AMSU (0.968–0.994). The SST of the AIRS only compared to that of the AIRS/AMSU had a bias of 0.168 K with a RMSE of 0.590 K over the Northern Hemisphere high latitudes and a bias of −0.109 K with a RMSE of 0.852 K over the Southern Hemisphere high latitudes. There was a systematic disagreement between the AIRS retrievals at the boundary of the sea ice, because the AIRS only algorithm utilized a less accurate GCM forecast over the seasonally varying frozen oceans than the microwave data. The three data sets (MODIS, AIRS/AMSU and AIRS only) showed significant warming rates (2.3 ± 1.7 ~ 2.8 ± 1.9 K decade−1) in the northern high regions (70–80° N) as expected from the ice-albedo feedback. The systematic temperature disagreement associated with surface type classification had an impact on the resulting temperature trends.

scholarly journals High prevalence and diversity of beta-lactamase-encoding bacteria in cryosoils and ancient permafrost

2021 ◽  
Author(s):  
Sofia Rigou ◽  
Eugene Christo-Foroux ◽  
Sebastien Santini ◽  
Artemiy Goncharov ◽  
Jens Strauss ◽  
...  
Keyword(s):  
High Throughput Sequencing ◽  
Bacterial Genome ◽  
Environmental Dna ◽  
Single Copy ◽  
The Arctic ◽  
Human Society ◽  
Beta Lactamase ◽  
Extended Spectrum Beta Lactamase ◽  
Arctic Regions ◽  
Global Threat

Background: Antimicrobial resistance is one of the major challenges affecting public health. It is mostly due to the continuous emergence of extended-spectrum beta-lactamase from various environments followed by their rapid dissemination and selection in clinical settings. The warming of Earth' s climate is the other global threat facing human society, in particular with the Arctic regions experiencing a twice faster warming than the global average and permafrost affected by widespread thawing. A potentially dreadful combination of these two threats would be the release and dispersion of harmful microbes that have remained confined to largely uninhabited Arctic regions, or are stored dormant in permafrost. Methods: Environmental DNA was isolated from 12 soil samples from various Arctic and subarctic pristine regions in Siberia (Yakutia and Kamchatka), including 9 permafrost samples collected at various depths. The large datasets obtained from high throughput sequencing was assembled in contigs and their protein-gene contents predicted. We used exhaustive similarity searches to perform taxonomical assignments of bacterial, archaeal, and eukaryotic organisms, as well as DNA viruses. In addition, we specifically identified beta-lactamase genes and their prevalence per bacterial genome estimated through the detection of two universal single copy genes. Findings: A total of 9.217 1011 bp were exploited, leading to a total of 525,313 contigs at least 5kb in size. The DNA content of the various samples was found to be highly variable, not strictly correlated with the depth or radio-carbon-based deposit age, and most likely linked to the global density of microbes trapped in the corresponding permafrost layers. Bacteria account for more than 90% of the contigs in most samples, followed by Eukaryotes and Archaea (always lower than 10%). Viruses represented less than 2% of all contigs in all samples. The taxonomic profiles of surface cryosoils and deep permafrost samples exhibited a high diversity, including between permafrost samples originating from various depths in the same borehole. In all samples, bacterial contigs carrying different beta-lactamases from class A to D were identified. Interpretation: No clear common taxonomic feature could be found shared by surface cryosoils or ancient permafrost layers. However, most samples (9/12) exhibited a high frequency of beta-lactamase genes, with an estimated average close to 1 copy/bacterial genome. In addition to the well-documented reactivation of infectious ancient pathogens (bacteria, viruses, protozoa), we show now that global warming could contribute to the emergence of new antibiotic resistances through the mobilization by contemporary bacteria of ancient DNA released from thawing permafrost.

scholarly journals Observational evidence for the formation of ocean DMS-derived aerosols during Arctic phytoplankton blooms

2017 ◽  
Author(s):  
Ki-Tae Park ◽  
Sehyun Jang ◽  
Kitack Lee ◽  
Young Jun Yoon ◽  
Min-Seob Kim ◽  
...  
Keyword(s):  
Dimethyl Sulfide ◽  
Phytoplankton Bloom ◽  
The Arctic ◽  
Size Distributions ◽  
Particle Size Distributions ◽  
Phytoplankton Blooms ◽  
Mixing Ratios ◽  
Arctic Haze ◽  
Aerosol Particle Size ◽  
Arctic Atmosphere

Abstract. The connection between marine biogenic dimethyl sulfide (DMS) and the formation of aerosol particles in the Arctic atmosphere was evaluated by analyzing atmospheric DMS mixing ratios, aerosol particle size distributions and aerosol chemical composition data that were concurrently collected at Ny-Ålesund, Svalbard (78.5° N, 11.8° E) during April and May 2015. Measurements of aerosol sulfur (S) compounds showed distinct patterns during periods of Arctic haze (April) and phytoplankton blooms (May). Specifically, during the phytoplankton bloom period the contribution of DMS-derived SO42− to the total aerosol SO42− increased by 7-fold compared with that during the proceeding Arctic haze period, accounting for up to 70 % of fine SO42− particles (

scholarly journals Incorporation of satellite-derived thin-ice data into a global OGCM simulation

2019 ◽  
Vol 53 (11) ◽  
pp. 7113-7130
Author(s):  
Takahiro Toyoda ◽  
Katsushi Iwamoto ◽  
L. Shogo Urakawa ◽  
Hiroyuki Tsujino ◽  
Hideyuki Nakano ◽  
...  
Keyword(s):  
Sea Ice ◽  
Arctic Ocean ◽  
Model Simulation ◽  
Mixed Layer Depth ◽  
The Arctic ◽  
Sea Ice Thickness ◽  
Ice Volume ◽  
The Arctic Ocean ◽  
Polar Ocean ◽  
Ice Production

Abstract The presence of thin sea ice is indicative of active freezing conditions in the polar ocean. We propose a simple yet effective method to incorporate information of thin-ice category into coupled ocean–sea-ice model simulations. In our approach, the thin-ice distribution restricts thick-ice extent and constrains atmosphere–ocean heat exchange through the sea ice. Our model simulation with the incorporation of satellite-derived thin-ice data for the Arctic Ocean showed much improved representation of sea-ice and upper-ocean fields, including sea-ice thickness in the Canadian Archipelago and the region north of Greenland, mixed-layer depth over the Central Arctic, and surface-layer salinity over the open ocean. Enhanced sea-ice production by the thin-ice data constraint increased the total sea-ice volume of the Arctic Ocean by $$5 \times 10^{3}$$ 5 × 10 3 –$$10 \times 10^{3}$$ 10 × 10 3  km3. Subsequent sea-ice melting was also enhanced, leading to the greater amplitude of the seasonal cycle by approximately $$2 \times 10^{3}$$ 2 × 10 3  km3 (15% of the baseline value from the experiment without the thin-ice data incorporation). Overall, our results demonstrate that the incorporation of satellite-derived information on thin sea ice has great potential for the improvement of coupled ocean–sea-ice simulations.

Deep waters of the Arctic Ocean: origins and circulation

1995 ◽  
Vol 42 (5) ◽  
pp. 737-760 ◽  
Author(s):  
E.P. Jones ◽  
B. Rudels ◽  
L.G. Anderson
Keyword(s):  
Arctic Ocean ◽  
The Arctic ◽  
Deep Waters ◽  
The Arctic Ocean

The European Court of Human Rights and the Protection of Arctic Indigenous Peoples Rights

2018 ◽  
Vol 9 (1) ◽  
pp. 24-52
Author(s):  
Mikael Lundmark
Keyword(s):  
Human Rights ◽  
Indigenous Peoples ◽  
Active Role ◽  
Case Law ◽  
Historical Background ◽  
The Arctic ◽  
European Convention ◽  
European Court ◽  
Protection Of Human Rights ◽  
Solid Foundation

Based on an ongoing case in Sweden, where Girjas Sami village sued the Swedish state for violation of property rights, this article examines the European Court of Human Rights’ potential influence in the Arctic region’s legal system when it comes to protection of property of Arctic indigenous peoples. This article shows that notwithstanding the historical background of the European Convention for the Protection of Human Rights and Fundamental Freedoms, the case law of the Court provides a solid foundation to advocate that the Court can take a more active role in protecting the rights of Arctic indigenous peoples. What is different in the case of indigenous peoples is that their rights pre-exist that of a modern state, and this does not correlate with the structure of the Convention, which seemingly leads to less protection under the Convention for indigenous peoples. This puts a higher level of responsibility both upon the applicants, as well as on the Court to scrutinize, and apply, the case law of the Court in line with the Convention and the adopted principle of interpretation.

scholarly journals Boundary layer and free-tropospheric dimethyl sulfide in the Arctic spring and summer

2017 ◽  
Vol 17 (14) ◽  
pp. 8757-8770 ◽  
Author(s):  
Roghayeh Ghahremaninezhad ◽  
Ann-Lise Norman ◽  
Betty Croft ◽  
Randall V. Martin ◽  
Jeffrey R. Pierce ◽  
...  
Keyword(s):  
Dimethyl Sulfide ◽  
Transport Model ◽  
Dispersion Model ◽  
Open Water ◽  
Particle Dispersion ◽  
The Arctic ◽  
Chemical Transport Model ◽  
Model Simulations ◽  
Baffin Bay ◽  
Mixing Ratios

Abstract. Vertical distributions of atmospheric dimethyl sulfide (DMS(g)) were sampled aboard the research aircraft Polar 6 near Lancaster Sound, Nunavut, Canada, in July 2014 and on pan-Arctic flights in April 2015 that started from Longyearbyen, Spitzbergen, and passed through Alert and Eureka, Nunavut, and Inuvik, Northwest Territories. Larger mean DMS(g) mixing ratios were present during April 2015 (campaign mean of 116  ±  8 pptv) compared to July 2014 (campaign mean of 20  ±  6 pptv). During July 2014, the largest mixing ratios were found near the surface over the ice edge and open water. DMS(g) mixing ratios decreased with altitude up to about 3 km. During April 2015, profiles of DMS(g) were more uniform with height and some profiles showed an increase with altitude. DMS reached as high as 100 pptv near 2500 m. Relative to the observation averages, GEOS-Chem (www.geos-chem.org) chemical transport model simulations were higher during July and lower during April. Based on the simulations, more than 90 % of the July DMS(g) below 2 km and more than 90 % of the April DMS(g) originated from Arctic seawater (north of 66° N). During April, 60 % of the DMS(g), between 500 and 3000 m originated from Arctic seawater. During July 2014, FLEXPART (FLEXible PARTicle dispersion model) simulations locate the sampled air mass over Baffin Bay and the Canadian Arctic Archipelago 4 days back from the observations. During April 2015, the locations of the air masses 4 days back from sampling were varied: Baffin Bay/Canadian Archipelago, the Arctic Ocean, Greenland and the Pacific Ocean. Our results highlight the role of open water below the flight as the source of DMS(g) during July 2014 and the influence of long-range transport (LRT) of DMS(g) from further afield in the Arctic above 2500 m during April 2015.

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