scholarly journals Cellulosomics, a Gene-Centric Approach to Investigating the Intraspecific Diversity and Adaptation of Ruminococcus flavefaciens within the Rumen

PLoS ONE ◽  
2011 ◽  
Vol 6 (10) ◽  
pp. e25329 ◽  
Author(s):  
Jennifer M. Brulc ◽  
Carl J. Yeoman ◽  
Melissa K. Wilson ◽  
Margret E. Berg Miller ◽  
Patricio Jeraldo ◽  
...  
Planta Medica ◽  
2015 ◽  
Vol 81 (11) ◽  
Author(s):  
X Zhao ◽  
WA van der Donk

2021 ◽  
Vol 11 (4) ◽  
pp. 1595
Author(s):  
Salvatore La China ◽  
Luciana De Vero ◽  
Kavitha Anguluri ◽  
Marcello Brugnoli ◽  
Dhouha Mamlouk ◽  
...  

Bacterial cellulose (BC) is receiving a great deal of attention due to its unique properties such as high purity, water retention capacity, high mechanical strength, and biocompatibility. However, the production of BC has been limited because of the associated high costs and low productivity. In light of this, the isolation of new BC producing bacteria and the selection of highly productive strains has become a prominent issue. Kombucha tea is a fermented beverage in which the bacteria fraction of the microbial community is composed mostly of strains belonging to the genus Komagataeibacter. In this study, Kombucha tea production trials were performed starting from a previous batch, and bacterial isolation was conducted along cultivation time. From the whole microbial pool, 46 isolates were tested for their ability to produce BC. The obtained BC yield ranged from 0.59 g/L, for the isolate K2G36, to 23 g/L for K2G30—which used as the reference strain. The genetic intraspecific diversity of the 46 isolates was investigated using two repetitive-sequence-based PCR typing methods: the enterobacterial repetitive intergenic consensus (ERIC) elements and the (GTG)5 sequences, respectively. The results obtained using the two different approaches revealed the suitability of the fingerprint techniques, showing a discrimination power, calculated as the D index, of 0.94 for (GTG)5 rep-PCR and 0.95 for ERIC rep-PCR. In order to improve the sensitivity of the applied method, a combined model for the two genotyping experiments was performed, allowing for the ability to discriminate among strains.


2021 ◽  
Vol 13 (5) ◽  
pp. 2658
Author(s):  
Rose Nankya ◽  
John W. Mulumba ◽  
Hannington Lwandasa ◽  
Moses Matovu ◽  
Brian Isabirye ◽  
...  

The cultivated peanut (Arachis hypogaea L.) is one of the most widely consumed legumes globally due to its nutrient content, taste, and affordability. Nutrient composition and consumer preference were determined for twenty local farmer (landrace) and commercial peanut varieties grown in the Nakaseke and Nakasongola districts of the central wooded savanna of Uganda through sensory and laboratory evaluation. Significant differences in nutrient content (p < 0.05) among peanut varieties were found within and across sites. A significant relationship between nutrient content and consumer preference for varieties within and across sites was also realized (Wilk’s lambda = 0.05, p = 0.00). The differences in nutrient content influenced key organoleptic characteristics, including taste, crunchiness, appearance, and soup aroma, which contributed to why consumers may prefer certain varieties to others. Gender differences in variety selection were significantly related to consumer preference for the crunchiness of roasted peanut varieties (F = 5.7, p = 0.016). The results imply that selecting different varieties of peanuts enables consumers to receive different nutrient amounts, while experiencing variety uniqueness. The promotion of peanut intraspecific diversity is crucial for improved nutrition, organoleptic appreciation and the livelihood of those engaged in peanut value chains, especially for the actors who specialize in different peanut products. The conservation of peanut diversity will ensure that the present and future generations benefit from the nutritional content and organoleptic enjoyment that is linked to unique peanut varieties.


Zootaxa ◽  
2021 ◽  
Vol 5040 (3) ◽  
pp. 334-364
Author(s):  
MAURICIO RIVERA-CORREA ◽  
GUSTAVO A. GONZÁLEZ-DURÁN ◽  
ANA M. SALDARRIAGA-GÓMEZ ◽  
SEBASTIÁN DUARTE-MARÍN

Frequent biodiversity sampling and monitoring programs often lead to relevant taxonomic findings. Here, as a product of different field expeditions to two places in the northern Andes, we discover and describe two new species of rain frogs of the genus Pristimantis from the cloud forests of the Central Cordillera of Colombia. Pristimantis chocolatebari sp. nov. is diagnosed by having the following character states: dentigerous process of vomer triangular, snout large and protruding, dorsum smooth, vocal slits and vocal sac present, groin and hidden part of the thighs yellow. Pristimantis carylae sp. nov. is diagnosed by having iris copper red, dentigerous process of vomer oval, snout short and rounded, dorsum finely shagreen with scattered tubercles, double nuptial pad in males, groin and hidden part of thighs pink. We also infer, for the first time, the phylogenetic position of P. permixtus, P. platychilus, and two candidate new species. In addition, we emphasize not to use genetic distance as the only source of evidence for species delimitation, considering the high intraspecific diversity found in one of the species described here. Finally, we highlight the relevance of different habitat and ecosystem conservation strategies to promote amphibian diversity studies in the Andes.  


BioResources ◽  
2014 ◽  
Vol 9 (3) ◽  
Author(s):  
Jasmina Ćilerdžić ◽  
Mirjana Stajić ◽  
Jelena Vukojević ◽  
Nikola Lončar

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