scholarly journals Bioprospecting endophytic bacteria for biological control of coffee leaf rust

2006 ◽  
Vol 63 (1) ◽  
pp. 32-39 ◽  
Author(s):  
Humberto Franco Shiomi ◽  
Harllen Sandro Alves Silva ◽  
Itamar Soares de Melo ◽  
Flávia Vieira Nunes ◽  
Wagner Bettiol
Keyword(s):  
Leaf Rust ◽  
Endophytic Bacteria ◽  
Plant Diseases ◽  
Bacterial Isolates ◽  
Hemileia Vastatrix ◽  
Leaf Discs ◽  
Coffee Leaf Rust ◽  
Detached Leaves ◽  
Severity Of The Disease ◽  
Coffea Robusta

Suppression of plant diseases due to the action of endophytic microorganisms has been demonstrated in several pathosystems. Experiments under controlled conditions involving endophytic bacteria isolated from leaves and branches of Coffea arabica L and Coffea robusta L were conducted with the objective of evaluating the inhibition of germination of Hemileia vastatrix Berk. & Br., race II, urediniospores and the control of coffee leaf rust development in tests with leaf discs, detached leaves, and on potted seedling of cv. Mundo Novo. The endophytic bacterial isolates tested proved to be effective in inhibiting urediniospore germination and/or rust development, with values above 50%, although the results obtained in urediniospore germination tests were inferior to the treatment with fungicide propiconazole. Endophytic isolates TG4-Ia, TF2-IIc, TF9-Ia, TG11-IIa, and TF7-IIa, demonstrated better coffee leaf rust control in leaf discs, detached leaves, and coffee plant tests. The endophytic isolates TG4-Ia and TF9-Ia were identified as Bacillus lentimorbus Dutky and Bacillus cereus Frank. & Frank., respectively. Some endophytic bacterial isolates were effective in controlling the coffee leaf rust, although some increased the severity of the disease. Even though a relatively small number of endophytic bacteria were tested, promising results were obtained regarding the efficiency of coffee leaf rust biocontrol. These selected agents appears to be an alternative for future replacement of chemical fungicide.

scholarly journals Serangan Karat Daun Kopi (Hemileia vastatrix B et Br) pada Tanaman Kopi Arabika di Perkebunan Rakyat Kabupaten Mandailing Natal Sumatera Utara

2018 ◽  
Vol 1 (1) ◽  
pp. 82-86
Author(s):  
Riza Kusuma Widia Siska ◽  
Lahmuddin Lubis ◽  
Lisnawati Lisnawati
Keyword(s):  
Leaf Rust ◽  
Random Sampling ◽  
Geographical Location ◽  
Limiting Factors ◽  
Rust Disease ◽  
Hemileia Vastatrix ◽  
Coffee Plantations ◽  
Coffee Leaf Rust ◽  
Severity Of The Disease ◽  
North Sumatra

Kabupaten Mandailing Natal merupakan daerah penghasil kopi di Sumatera Utara. Salah satu factor pembatas produksi kopi di kabupaten ini adalah adanya serangan penyakit karat daun yang disebabkan oleh Hemileia vastatrix. Namun informasi sebaran dan keparahan penyakit karat daun kopi di kabupaten ini belum ada.Padaha linformasi ini diperlukan untuk menentukan strategi pengendalian yang tepat. Penelitian ini bertujuan untuk mengetahui keparahan penyakit dan pemetaan sebaranpenyakit karat daun kopi pada perkebunan kopi rakyat di Kabupaten Mandailing Natal. Penelitian dilaksanakan dengan metode purposive random sampling (PRS) di tiga kecamatan masing-masing Kecamatan Pakantan, Puncak Sorik Marapi dan Ulu Pungkut dengan lokasi geografis 0° 10° – 1° 50° LU dan 98° 50° – 100° 10° BT dengan ketinggian tempatantara 861-1353 meter diatas permukaan laut. Hasil penelitian menunjukkan penyakit karat daun kopi telah tersebar pada letak geografis 0°10°-1°50°LU dan 98°50°-100°10°BT dengan keparahan penyakit karat daun kopi tertinggi yaitu 45% terdapat di Desa Huta Namale, Kecamatan Puncak Sorik Marapi, sebaliknya keparahan penyakit karat daun kopi yang terendah terdapatdi Desa Huta Julu, Kecamatan Pakantan yaitu sebesar1%. Faktor suhu, ketinggian tempat dan jarak tanam berkorelasi sangat rendah terhadap tingkat kejadian dan keparahan penyakit karat daun kopi. Mandailing Natal Regency is a coffee-producing area in North Sumatra. One of the limiting factors for coffee production in this district is the attack of coffee leaf rust disease caused by Hemileia vastatrix. The information on the distribution and severity of coffee leaf rust disease in this district is needed to determine its control strategy. This study aims to determine the severity of the disease and the mapping of the spread of coffee leaf rust disease on people's coffee plantations in Mandailing Natal District. The study was carried out by purposive random sampling (PRS) method in three sub-districts of Pakantan Subdistrict, Sorik Marapi and Ulu Pungkut Peak with a geographical location of 0 ° 10 ° - 1 ° 50 ° N and 98 ° 50 ° - 100 ° 10 ° with the altitude between 861-1353 meters above sea level. The results showed that the coffee leaf rust disease was spread over a geographical location of 0 ° 10 ° -1 ° 50 ° N and 98 ° 50 ° -100 ° 10 ° East with the highest severity of coffee leaf rust disease, 45% in Huta Namale Village, District Sorik Marapi Peak, on the contrary the lowest severity of coffee leaf rust disease is in Huta Julu Village, Pakantan District, which is equal to 1%. Temperature, altitude, and spacing factors are very low correlated with the incidence and severity of coffee leaf rust disease.

scholarly journals Drying Time of Systemic and Protectant Fungicides on Coffee Leaves Exposed to Artificial Rain for the Control of Leaf Rust

2019 ◽  
Vol 11 (6) ◽  
pp. 329
Author(s):  
Eduardo Granados ◽  
Laércio Zambolim
Keyword(s):  
Leaf Rust ◽  
Leaf Surface ◽  
Mineral Oil ◽  
Plant Diseases ◽  
Copper Oxychloride ◽  
Copper Hydroxide ◽  
Hemileia Vastatrix ◽  
Drying Time ◽  
Coffee Leaf Rust ◽  
Simulated Rain

The drying time of pesticides on the leaves and the resistance of the deposits to rain removal are essential for success in controlling plant diseases. Because the fungicide application is performed during the rainy season, it is crucial to study the resistance of chemical deposits on the leaf surface for the control of the coffee leaf rust caused by Hemileia vastatrix. Thus, the present work analyzed the effect of an simulated rain (30 min), after several drying time of the deposits, on the removal of (i) copper oxychloride alone and associated to mineral and the adjuvant polyoxyethylene alkylphenol ether and also (ii) before several drying time, on the removal of the epoxiconazol + pyraclostrobin formulation mixed with copper hydroxide and micronutrients applied on coffee leaves, for the control of leaf rust. Around 85% and 45% of the treatments had copper retention > 30% after 120 min and 480 min, respectively, of drying time before the rain. At 480 min, retention of copper oxychloride + 0.75% mineral oil was > 30%, whereas copper oxychloride + adjuvant polyoxyethylene alkylphenol ether at 0.05% and 0.1%, respectively was 40% or higher. When copper oxychloride was added to 0.5% mineral oil at 0.05% to 0.20% of adjuvant polyoxyethylene alkylphenol ether at 480 min of drying time, copper retention was > 30%. When copper oxychloride was added to 0.75% mineral oil, copper retention was > 30% at 0.05% and 0.10 % of adjuvant polyoxyethylene alkylphenol ether. Five of the treatments with copper retention > 50% with 120 min of drying time were reduced to only two (copper oxychloride + 0.75% mineral oil; copper oxychloride + (1.0% mineral oil + 0.1% adjuvant polyoxyethylene alkylphenol ether) with copper retention > 30%, at the drying time of 480 min. All the treatments differed from the control but did not differ between each other for the coffee leaf rust control. The percentage of control ranged from 94.6% to 100% and from 71.3% to 99.5% at 180 min and 480 min of drying time, respectively. Copper retention varied from 32.2% to 55.2% and from 23.7% to 51.5%, at 180 min and 480 min of drying time, respectively, for the best treatments. The treatment with the highest copper retention was copper oxychloride + 0.75% mineral oil, both at 180 min and 480 min of drying time. The best treatments for leaf rust control were not always those with the highest copper retention by the leaves. The highest copper retention by the leaf surface was achieved with copper oxychloride mixed with 0.75% mineral oil; this treatment resulted in > 97% of coffee leaf rust control. Adding adjuvant polyoxyethylene alkylphenol ether to the mixture does not necessarily favor the tenacity and efficiency of the copper oxychloride for the coffee leaf rust control. We concluded that the copper oxychloride acts differently for the coffee leaf rust control, depending on the concentration of added mineral oil and adjuvant polyoxyethylene alkylphenol ether time zero. Pyraclostrobin + epoxiconazol alone or mixed with copper hidroxide controlled 100% of the disease after 30 min, 120 min and 480 min of spraying, but when micronutrients was added to pyraclostrobin + epoxiconazol and copper hidroxide control of coffee leaf rust reached 100% at drying time of 120 and 480 min.

scholarly journals A fungus-eat-fungus world: Digitopodium, with particular reference to mycoparasites of the coffee leaf rust, Hemileia vastatrix

IMA Fungus ◽  
2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Adans A. Colmán ◽  
Harry C. Evans ◽  
Sara S. Salcedo-Sarmiento ◽  
Uwe Braun ◽  
Kifle Belachew-Bekele ◽  
...  
Keyword(s):  
Leaf Rust ◽  
Democratic Republic Of Congo ◽  
Sequence Data ◽  
Molecular Study ◽  
Classical Biological Control ◽  
Coffea Canephora ◽  
Molecular Data ◽  
Phylogenetic Position ◽  
Hemileia Vastatrix ◽  
Coffee Leaf Rust

AbstractDigitopodium hemileiae was described originally in 1930 as Cladosporium hemileiae; growing as a mycoparasite of the coffee leaf rust (CLR), Hemileia vastatrix, in a sample of diseased leaves of Coffea canephora collected in the Democratic Republic of Congo. No cultures from this material exist. More recently, the type material was re-examined and, based on morphological features, considered to be incorrectly placed in Cladosporium. The new genus Digitopodium was erected to accommodate this species. Interest in fungal antagonists of H. vastarix, as potential biocontrol agents of CLR, led to comprehensive surveys for mycoparasites, both in the African centre of origin of the rust, as well as in its South American exotic range. Among the rust specimens from Ethiopia, one was found to be colonized by a fungus congeneric with, and similar to, D. hemileiae. Pure cultures obtained from the Ethiopian material enabled a molecular study and for its phylogenetic position to be elucidated, based on DNA sequence data from the ITS and LSU regions. Molecular data showed that two members of the recently erected genus Hyalocladosporiella (Herpotrichiellaceae: Chaetothyriales) are congeneric with Digitopodium from Ethiopia and morphologically similar to both D. hemileiae and the two Ethiopian isolates. These isolates were found to be morphologically and genetically identical to H. tectonae, described previously from Brazil. Thus, species of Hyalocladosporiella are re-allocated to Digitopodium here; including D. tectonae, and a novel species, D. canescens, recently found in Brazil growing as a mycoparasite of Puccinia thaliae. The potential use of D. hemileiae and D. tectonae for classical biological control of CLR is discussed.

scholarly journals Stability of Arabica coffee genotype (Coffea arabica L.) against leaf rust (Hemileia vastatrix)

2021 ◽  
Vol 748 (1) ◽  
pp. 012002
Author(s):  
Sabam Malau ◽  
Albiner Siagian ◽  
Maria Rumondang Sihotang
Keyword(s):  
Leaf Rust ◽  
Block Design ◽  
Research Result ◽  
Dry Season ◽  
Environment Interaction ◽  
Rust Disease ◽  
Hemileia Vastatrix ◽  
Arabica Coffee ◽  
Coffee Leaf Rust ◽  
Rust Severity

Abstract Coffee is now experiencing a serious threat from fungus Hemileia vastatrix which caused epidemic of rust disease in America, Africa, and Asia. As solution, the use of resistant cultivars is the best way. However, interaction between genotype and environment can change the rank of genotypes that shows instability of these genotypes against leaf rust. Purpose of this research was to study stability of genotypes of Arabica coffee against coffee leaf rust. A field experiment was arranged as factorial randomized complete block design with 2 factors (genotypes and climate zones) with three replication. The observed parameters were branch rust incidence, leaf rust incidence, and leaf rust severity. This research result showed significant genotype x environment interaction in all variables. Length of dry season is the most important factor affecting coffee leaf rust because it had the highest correlation coefficient with leaf rust severity (r = 0.662**). Less length of dry season should be the first criteria for selection of coffee farms. The most desired genotype was G7 which performed low leaf rust severity (7.71%) and had a stable resistance indicated by the same leaf rust severity in all environments and 6 SMg. Due to the significant interaction between genotypes and the environment, the genotype to be planted in a region must be tested in that region first.

Non-host resistance responses of Arabidopsis thaliana to the coffee leaf rust fungus (Hemileia vastatrix)

Botany ◽  
2010 ◽  
Vol 88 (7) ◽  
pp. 621-629 ◽  
Author(s):  
Helena Gil Azinheira ◽  
Maria do Céu Silva ◽  
Pedro Talhinhas ◽  
Clara Medeira ◽  
Isabel Maia ◽  
...  
Keyword(s):  
Arabidopsis Thaliana ◽  
Leaf Rust ◽  
Rust Fungus ◽  
Hemileia Vastatrix ◽  
Callose Deposition ◽  
Mesophyll Cells ◽  
Model Plant ◽  
Heterologous System ◽  
Coffee Leaf Rust ◽  
Model Plant Arabidopsis Thaliana

Leaf rust, caused by Hemileia vastatrix Berk & Broome, is the most destructive fungal disease of coffee. In the absence of a suitable gene validation system in coffee, the objective of this study was to investigate whether the model plant Arabidopsis thaliana (L.) Heynh. may be used as a heterologous system for the molecular dissection of coffee responses to leaf rust. Histological examination of A. thaliana (Col-0) leaves inoculated with H. vastatrix (race II) showed that by 24 h after inoculation (hai), H. vastatrix uredospores differentiated appressoria and penetrated the stomata, but failed to form haustoria. Arabidopsis thaliana cellular resistance responses included hypersensitive-like response (HR) of stomata guard cells together with accumulation of phenolic compounds and callose deposition in walls of epidermal and mesophyll cells. Results indicate that H. vastatrix infection triggered the induction of a set of defence-related genes peaking at 18 and 42 hai. The non-host HR triggered by H. vastatrix in the model plant A. thaliana makes it usable to infer the function of coffee genes involved in pre-haustorial rust resistance.

Evaluation of Different Botanicals for the Control of Coffee Leaf Rust (Hemileia vastatrix Berkeley and Broome)

2017 ◽  
Vol 14 (6) ◽  
pp. 1-8
Author(s):  
R Mudyiwa ◽  
N Mwatsiya ◽  
B Manenji ◽  
P Chidoko ◽  
C Mahoya
Keyword(s):  
Leaf Rust ◽  
Hemileia Vastatrix ◽  
Coffee Leaf Rust

Sensitization to the fungus Hemileia vastatrix (coffee leaf rust)

Allergy ◽  
2001 ◽  
Vol 56 (7) ◽  
pp. 684-687 ◽  
Author(s):  
M. A. Croce Portocarrero ◽  
E. Rosa da Costa Manso ◽  
W. Gambale ◽  
L. Takayama ◽  
C. E. Oliveira Andrade ◽  
...  
Keyword(s):  
Leaf Rust ◽  
Hemileia Vastatrix ◽  
Coffee Leaf Rust

scholarly journals Current status on coffee leaf rust (hemileia vastatrix) in sidama and gedeo zone, southern Ethiopia

2021 ◽  
Vol 9 (1) ◽  
Author(s):  
Ano Wariyo ◽  
Habtamu Gebreselassie ◽  
Wondmagegnehu Gerbatsedik ◽  
Kifle Belachew
Keyword(s):  
Leaf Rust ◽  
Disease Incidence ◽  
Regression Equation ◽  
Current Status ◽  
Southern Ethiopia ◽  
Hemileia Vastatrix ◽  
Resistant Varieties ◽  
Coffee Leaf Rust ◽  
Control Disease ◽  
Extent Of Damage

Coffee is the most important and second traded commodity next to oil in the world. In Ethiopia, coffee leaf rust caused by Hemileia vastatrix is one of the third most economically important diseases of Coffee Arabica. The current status of coffee leaf rust was intensively assessed and examined in 189 sample coffee farms from six districts across major coffee growing areas of the Southern Ethiopia. At each farm, ten randomly selected trees on a diagonal transect across the farm were assessed for disease incidence and severity. The survey data showed that coffee leaf rust was present in all assessed district varying in magnitude and extent of damage. The highest overall mean of rust incidence (38.6%) and severity (13.80%) was recorded at Dilla zuria while the lowest incidence (10.52%) and severity (1.38%) was at Yergachaffee district. The highest altitude range was obtained at Yergachaffee (1838-2056) while the lowest was at Dilla zuria (1434-1825) district. Overall mean severity and incidence result indicate that, there was statistical (p = 0.058 for severity, p = 0.044 for incidence) and negative correlation between intensity and altitude (severity, r= -0.80 and incidence, r= -0.82). The linear regression equation of severity and incidence obtained from the data was Y= -0.036X+73.16 and Y = -0.074X +158.9 (where Y= percentage CLR severity and incidence, respectively and X= altitude). This regression equation implies that, in higher elevation areas the rust intensity was low as compare to the lower elevation. Finally, the disease was remarkably increasing from time to time in all assessed coffee farms. Therefore, appropriate measurement like farmers’ awareness creation and training on how to control disease as well as appropriate agronomic managements has to be seriously undertaken. In addition, development of coffee leaf rust resistant varieties to southern Ethiopia through resistant breeding has to be set high priority.

scholarly journals KARAKTERISTIK MORFOLOGI DAN FISIOLOGI BAKTERI ENDOFIT DAN RIZOBAKTERI DARI TANAMAN CENGKEH SEHAT

2021 ◽  
Vol 4 (1) ◽  
pp. 1-8
Author(s):  
Fina Dwimartina ◽  
Tri Joko ◽  
Triwidodo Arwiyanto
Keyword(s):  
Biological Control ◽  
Endophytic Bacteria ◽  
Host Plants ◽  
Morphological Characteristics ◽  
Plant Diseases ◽  
Bacterial Isolates ◽  
Biological Control Agents ◽  
Determining Factors ◽  
Symbiotic Mutualism ◽  
Bacillus Spp

One of the determining factors in disease control is the use of superior seeds which have good quality and quantity. The use of biological control agents that form a symbiotic mutualism in their host plants can be used as an effort to obtain quality clove seeds. Endophytic bacteria and rhizobacteria have been reported as potential biological control agents for many plant diseases because of their safety in humans and non-target organisms. The purpose of this study was to identify the physiological and morphological characteristics of endophytic and rhizobacterial isolates obtained from clove plants. A total of 46 endophytic bacterial isolates were isolated from healthy clove roots, stems, leaves and flowers. Also, 66 isolates were isolated from the soil around the rhizosphere area. Based on the results of the identification of physiological and morphological characteristics, it is evident that the endophytic and rhizobacterial bacteria tested have the same character as Bacillus spp.

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