scholarly journals ICD Coding from Clinical Text Using Multi-Filter Residual Convolutional Neural Network

2020 ◽  
Vol 34 (05) ◽  
pp. 8180-8187 ◽  
Author(s):  
Fei Li ◽  
Hong Yu

Automated ICD coding, which assigns the International Classification of Disease codes to patient visits, has attracted much research attention since it can save time and labor for billing. The previous state-of-the-art model utilized one convolutional layer to build document representations for predicting ICD codes. However, the lengths and grammar of text fragments, which are closely related to ICD coding, vary a lot in different documents. Therefore, a flat and fixed-length convolutional architecture may not be capable of learning good document representations. In this paper, we proposed a Multi-Filter Residual Convolutional Neural Network (MultiResCNN) for ICD coding. The innovations of our model are two-folds: it utilizes a multi-filter convolutional layer to capture various text patterns with different lengths and a residual convolutional layer to enlarge the receptive field. We evaluated the effectiveness of our model on the widely-used MIMIC dataset. On the full code set of MIMIC-III, our model outperformed the state-of-the-art model in 4 out of 6 evaluation metrics. On the top-50 code set of MIMIC-III and the full code set of MIMIC-II, our model outperformed all the existing and state-of-the-art models in all evaluation metrics. The code is available at https://github.com/foxlf823/Multi-Filter-Residual-Convolutional-Neural-Network.

2017 ◽  
Vol 2017 ◽  
pp. 1-11 ◽  
Author(s):  
Siqi Tang ◽  
Zhisong Pan ◽  
Xingyu Zhou

This paper proposes an accurate crowd counting method based on convolutional neural network and low-rank and sparse structure. To this end, we firstly propose an effective deep-fusion convolutional neural network to promote the density map regression accuracy. Furthermore, we figure out that most of the existing CNN based crowd counting methods obtain overall counting by direct integral of estimated density map, which limits the accuracy of counting. Instead of direct integral, we adopt a regression method based on low-rank and sparse penalty to promote accuracy of the projection from density map to global counting. Experiments demonstrate the importance of such regression process on promoting the crowd counting performance. The proposed low-rank and sparse based deep-fusion convolutional neural network (LFCNN) outperforms existing crowd counting methods and achieves the state-of-the-art performance.


2018 ◽  
Vol 4 (9) ◽  
pp. 107 ◽  
Author(s):  
Mohib Ullah ◽  
Ahmed Mohammed ◽  
Faouzi Alaya Cheikh

Articulation modeling, feature extraction, and classification are the important components of pedestrian segmentation. Usually, these components are modeled independently from each other and then combined in a sequential way. However, this approach is prone to poor segmentation if any individual component is weakly designed. To cope with this problem, we proposed a spatio-temporal convolutional neural network named PedNet which exploits temporal information for spatial segmentation. The backbone of the PedNet consists of an encoder–decoder network for downsampling and upsampling the feature maps, respectively. The input to the network is a set of three frames and the output is a binary mask of the segmented regions in the middle frame. Irrespective of classical deep models where the convolution layers are followed by a fully connected layer for classification, PedNet is a Fully Convolutional Network (FCN). It is trained end-to-end and the segmentation is achieved without the need of any pre- or post-processing. The main characteristic of PedNet is its unique design where it performs segmentation on a frame-by-frame basis but it uses the temporal information from the previous and the future frame for segmenting the pedestrian in the current frame. Moreover, to combine the low-level features with the high-level semantic information learned by the deeper layers, we used long-skip connections from the encoder to decoder network and concatenate the output of low-level layers with the higher level layers. This approach helps to get segmentation map with sharp boundaries. To show the potential benefits of temporal information, we also visualized different layers of the network. The visualization showed that the network learned different information from the consecutive frames and then combined the information optimally to segment the middle frame. We evaluated our approach on eight challenging datasets where humans are involved in different activities with severe articulation (football, road crossing, surveillance). The most common CamVid dataset which is used for calculating the performance of the segmentation algorithm is evaluated against seven state-of-the-art methods. The performance is shown on precision/recall, F 1 , F 2 , and mIoU. The qualitative and quantitative results show that PedNet achieves promising results against state-of-the-art methods with substantial improvement in terms of all the performance metrics.


Author(s):  
Gauri Jain ◽  
Manisha Sharma ◽  
Basant Agarwal

This article describes how spam detection in the social media text is becoming increasing important because of the exponential increase in the spam volume over the network. It is challenging, especially in case of text within the limited number of characters. Effective spam detection requires more number of efficient features to be learned. In the current article, the use of a deep learning technology known as a convolutional neural network (CNN) is proposed for spam detection with an added semantic layer on the top of it. The resultant model is known as a semantic convolutional neural network (SCNN). A semantic layer is composed of training the random word vectors with the help of Word2vec to get the semantically enriched word embedding. WordNet and ConceptNet are used to find the word similar to a given word, in case it is missing in the word2vec. The architecture is evaluated on two corpora: SMS Spam dataset (UCI repository) and Twitter dataset (Tweets scrapped from public live tweets). The authors' approach outperforms the-state-of-the-art results with 98.65% accuracy on SMS spam dataset and 94.40% accuracy on Twitter dataset.


Author(s):  
Hongguo Su ◽  
Mingyuan Zhang ◽  
Shengyuan Li ◽  
Xuefeng Zhao

In the last couple of years, advancements in the deep learning, especially in convolutional neural networks, proved to be a boon for the image classification and recognition tasks. One of the important practical applications of object detection and image classification can be for security enhancement. If dangerous objects or scenes can be identified automatically, then a lot of accidents can be prevented. For this purpose, in this paper we made use of state-of-the-art implementation of Faster Region-based Convolutional Neural Network (Faster R-CNN) based on the monitoring video of hoisting sites to train a model to detect the dangerous object and the worker. By extracting the locations of them, object-human interactions during hoisting, mainly for changes in their spatial location relationship, can be understood whereby estimating whether the scene is safe or dangerous. Experimental results showed that the pre-trained model achieved good performance with a high mean average precision of 97.66% on object detection and the proposed method fulfilled the goal of dangerous scenes recognition perfectly.


Author(s):  
Qi Xin ◽  
Shaohao Hu ◽  
Shuaiqi Liu ◽  
Ling Zhao ◽  
Shuihua Wang

As one of the important tools of epilepsy diagnosis, the electroencephalogram (EEG) is noninvasive and presents no traumatic injury to patients. It contains a lot of physiological and pathological information that is easy to obtain. The automatic classification of epileptic EEG is important in the diagnosis and therapeutic efficacy of epileptics. In this article, an explainable graph feature convolutional neural network named WTRPNet is proposed for epileptic EEG classification. Since WTRPNet is constructed by a recurrence plot in the wavelet domain, it can fully obtain the graph feature of the EEG signal, which is established by an explainable graph features extracted layer called WTRP block . The proposed method shows superior performance over state-of-the-art methods. Experimental results show that our algorithm has achieved an accuracy of 99.67% in classification of focal and nonfocal epileptic EEG, which proves the effectiveness of the classification and detection of epileptic EEG.


2021 ◽  
pp. 1-10
Author(s):  
Gayatri Pattnaik ◽  
Vimal K. Shrivastava ◽  
K. Parvathi

Pests are major threat to economic growth of a country. Application of pesticide is the easiest way to control the pest infection. However, excessive utilization of pesticide is hazardous to environment. The recent advances in deep learning have paved the way for early detection and improved classification of pest in tomato plants which will benefit the farmers. This paper presents a comprehensive analysis of 11 state-of-the-art deep convolutional neural network (CNN) models with three configurations: transfers learning, fine-tuning and scratch learning. The training in transfer learning and fine tuning initiates from pre-trained weights whereas random weights are used in case of scratch learning. In addition, the concept of data augmentation has been explored to improve the performance. Our dataset consists of 859 tomato pest images from 10 categories. The results demonstrate that the highest classification accuracy of 94.87% has been achieved in the transfer learning approach by DenseNet201 model with data augmentation.


2021 ◽  
Author(s):  
Muhammad Shahroz Nadeem ◽  
Sibt Hussain ◽  
Fatih Kurugollu

This paper solves the textual deblurring problem, In this paper we propose a new loss function, we provide empirical evaluation of the design choices based on which a memory friendly CNN model is proposed, that performs better then the state of the art CNN method.


Author(s):  
Jianwen Jiang ◽  
Di Bao ◽  
Ziqiang Chen ◽  
Xibin Zhao ◽  
Yue Gao

3D shape retrieval has attracted much attention and become a hot topic in computer vision field recently.With the development of deep learning, 3D shape retrieval has also made great progress and many view-based methods have been introduced in recent years. However, how to represent 3D shapes better is still a challenging problem. At the same time, the intrinsic hierarchical associations among views still have not been well utilized. In order to tackle these problems, in this paper, we propose a multi-loop-view convolutional neural network (MLVCNN) framework for 3D shape retrieval. In this method, multiple groups of views are extracted from different loop directions first. Given these multiple loop views, the proposed MLVCNN framework introduces a hierarchical view-loop-shape architecture, i.e., the view level, the loop level, and the shape level, to conduct 3D shape representation from different scales. In the view-level, a convolutional neural network is first trained to extract view features. Then, the proposed Loop Normalization and LSTM are utilized for each loop of view to generate the loop-level features, which considering the intrinsic associations of the different views in the same loop. Finally, all the loop-level descriptors are combined into a shape-level descriptor for 3D shape representation, which is used for 3D shape retrieval. Our proposed method has been evaluated on the public 3D shape benchmark, i.e., ModelNet40. Experiments and comparisons with the state-of-the-art methods show that the proposed MLVCNN method can achieve significant performance improvement on 3D shape retrieval tasks. Our MLVCNN outperforms the state-of-the-art methods by the mAP of 4.84% in 3D shape retrieval task. We have also evaluated the performance of the proposed method on the 3D shape classification task where MLVCNN also achieves superior performance compared with recent methods.


2020 ◽  
Vol 10 (2) ◽  
pp. 84 ◽  
Author(s):  
Atif Mehmood ◽  
Muazzam Maqsood ◽  
Muzaffar Bashir ◽  
Yang Shuyuan

Alzheimer’s disease (AD) may cause damage to the memory cells permanently, which results in the form of dementia. The diagnosis of Alzheimer’s disease at an early stage is a problematic task for researchers. For this, machine learning and deep convolutional neural network (CNN) based approaches are readily available to solve various problems related to brain image data analysis. In clinical research, magnetic resonance imaging (MRI) is used to diagnose AD. For accurate classification of dementia stages, we need highly discriminative features obtained from MRI images. Recently advanced deep CNN-based models successfully proved their accuracy. However, due to a smaller number of image samples available in the datasets, there exist problems of over-fitting hindering the performance of deep learning approaches. In this research, we developed a Siamese convolutional neural network (SCNN) model inspired by VGG-16 (also called Oxford Net) to classify dementia stages. In our approach, we extend the insufficient and imbalanced data by using augmentation approaches. Experiments are performed on a publicly available dataset open access series of imaging studies (OASIS), by using the proposed approach, an excellent test accuracy of 99.05% is achieved for the classification of dementia stages. We compared our model with the state-of-the-art models and discovered that the proposed model outperformed the state-of-the-art models in terms of performance, efficiency, and accuracy.


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