scholarly journals Time Series Analysis of MODIS-Derived NDVI for the Hluhluwe-iMfolozi Park, South Africa: Impact of Recent Intense Drought

2018 ◽  
Author(s):  
Nkanyiso Mbatha ◽  
Sifiso Xulu
Keyword(s):  
Time Series ◽  
Vegetation Index ◽  
Southern Oscillation ◽  
Kendall Test ◽  
Google Earth ◽  
Maximum Temperature ◽  
Sudden Increase ◽  
Area Index ◽  
Enhanced Vegetation Index ◽  
Temperature And Precipitation

The variability of meteorological parameters such as temperature and precipitation, and climatic conditions such as intense droughts, are known to impact vegetation health over southern Africa. Thus, understanding large-scale ocean–atmospheric phenomena like the El Niño/Southern Oscillation (ENSO) and Indian Ocean Dipole/Dipole Mode Index (DMI) is important as these factors drive the variability of temperature and precipitation. In this study, 16 years (2002–2017) of Moderate Resolution Imaging Spectroradiometer (MODIS) Terra/Aqua 16-day normalized difference vegetation index (NDVI), extracted and processed using JavaScript code editor in the Google Earth Engine (GEE) platform in order to analyze the response pattern of the oldest proclaimed nature reserve in Africa, the Hluhluwe-iMfolozi Park (HiP), during the study period. The MODIS-enhanced vegetation index and burned area index were also analyzed for this period. The area-averaged Modern Retrospective Analysis for Research Application (MERRA) model maximum temperature and precipitation were also extracted using the JavaScript code editor in the GEE platform. This procedure demonstrated a strong reversal of both the NDVI and Enhanced Vegetation Index (EVI), leading to signs of a sudden increase of burned areas (strong BAI) during the strongest El Niño period. Both the Theilsen method and the Mann–Kendall test showed no significant greening or browning trends over the whole time series, although the annual Mann–Kendall test, in 2003 and 2014–2015, indicated significant browning trends due to the most recent strongest El Niño. Moreover, a multi-linear regression model seems to indicate a significant influence of both ENSO activity and precipitation. Our results indicate that the recent 2014–2016 drought altered the vegetation condition in the HiP. We conclude that it is vital to exploit freely available GEE resources to develop drought monitoring vegetation systems, and to integrate climate information for analyzing its influence on protected areas, especially in data-poor counties.

Assessing and monitoring the vulnerability to drought and climate anomalies of Mediterranenan oak forests by using NDVI

2020 ◽  
Author(s):  
Maria Castellaneta ◽  
Angelo Rita ◽  
J. Julio Camarero ◽  
Michele Colangelo ◽  
Angelo Nolè ◽  
...  
Keyword(s):  
Remote Sensing ◽  
Time Series ◽  
Tree Mortality ◽  
Vegetation Index ◽  
Google Earth ◽  
Oak Forests ◽  
Summer Drought ◽  
Area Index ◽  
Ndvi Time Series ◽  
The Impact

<p>Several die-off episodes related to heat weaves and drought spells have evidenced the high vulnerability of Mediterranean oak forests. These events consisted in the loss in tree vitality and manifested as growths decline, elevated crown transparency (defoliation) and rising tree mortality rate. In this context, the changes in vegetation productivity and canopy greenness may represent valuable proxies to analyze how extreme climatic events trigger forest die-off. Such changes in vegetation status may be analyzed using remote-sensing data, specifically multi-temporal spectral information. For instance, the Normalized Difference Vegetation Index (NDVI) measures changes in vegetation greenness and is a proxy of changes in leaf area index (LAI), forest aboveground biomass and productivity. In this study, we analyzed the temporal patterns of vegetation in three Mediterranean oak forests showing recent die-off in response to the 2017 severe summer drought. For this purpose, we used an open-source platform (Google Earth Engine) to extract collections of MODIS NDVI time-series from 2000 to 2019. The analysis of both NDVI trends and anomalies were used to infer differential patterns of vegetation phenology among sites comparing plots where most trees were declining and showed high defoliation (test) versus plots were most trees were considered healthy (ctrl) and showed low or no defoliation. Here we discuss: i) the likely offset in NDVI time-series between test- versus ctrl- sites; and ii) the impact of summer droughts  on NDVI.</p><p><strong>Keywords</strong>: climate change, forest vulnerability, time series, remote sensing.</p>

scholarly journals Time Series Analysis of MODIS-Derived NDVI for the Hluhluwe-Imfolozi Park, South Africa: Impact of Recent Intense Drought

Climate ◽  
2018 ◽  
Vol 6 (4) ◽  
pp. 95 ◽  
Author(s):  
Nkanyiso Mbatha ◽  
Sifiso Xulu
Keyword(s):  
El Niño ◽  
Vegetation Index ◽  
El Nino ◽  
Southern Oscillation ◽  
Climatic Variability ◽  
Phase Relationship ◽  
Google Earth ◽  
Area Index ◽  
Mk Test ◽  
Significant Downward Trend

The variability of temperature and precipitation influenced by El Niño-Southern Oscillation (ENSO) is potentially one of key factors contributing to vegetation product in southern Africa. Thus, understanding large-scale ocean–atmospheric phenomena like the ENSO and Indian Ocean Dipole/Dipole Mode Index (DMI) is important. In this study, 16 years (2002–2017) of Moderate Resolution Imaging Spectroradiometer (MODIS) Terra/Aqua 16-day normalized difference vegetation index (NDVI), extracted and processed using JavaScript code editor in the Google Earth Engine (GEE) platform was used to analyze the vegetation response pattern of the oldest proclaimed nature reserve in Africa, the Hluhluwe-iMfolozi Park (HiP) to climatic variability. The MODIS enhanced vegetation index (EVI), burned area index (BAI), and normalized difference infrared index (NDII) were also analyzed. The study used the Modern Retrospective Analysis for the Research Application (MERRA) model monthly mean soil temperature and precipitations. The Global Land Data Assimilation System (GLDAS) evapotranspiration (ET) data were used to investigate the HiP vegetation water stress. The region in the southern part of the HiP which has land cover dominated by savanna experienced the most impact of the strong El Niño. Both the HiP NDVI inter-annual Mann–Kendal trend test and sequential Mann–Kendall (SQ-MK) test indicated a significant downward trend during the El Niño years of 2003 and 2014–2015. The SQ-MK significant trend turning point which was thought to be associated with the 2014–2015 El Niño periods begun in November 2012. The wavelet coherence and coherence phase indicated a positive teleconnection/correlation between soil temperatures, precipitation, soil moisture (NDII), and ET. This was explained by a dominant in-phase relationship between the NDVI and climatic parameters especially at a period band of 8–16 months.

scholarly journals Bayesian Change Point Detection of Vegetation Cover Dynamics of Akure Forest Reserve, Ondo State in Southwestern, Nigeria

2021 ◽  
Vol 25 (8) ◽  
pp. 1449-1452
Author(s):  
P.A. Ukoha ◽  
S.J. Okonkwo ◽  
A.R. Adewoye
Keyword(s):  
Time Series ◽  
Change Point ◽  
Vegetation Index ◽  
Google Earth ◽  
Change Point Detection ◽  
Mcmc Methods ◽  
Landsat Images ◽  
Southwestern Nigeria ◽  
Forest Reserve ◽  
Point Detection

This study uses satellite acquired vegetation index data to monitor changes in Akure forest reserve. Enhanced Vegetation Index (EVI) time series datasets were extracted from Landsat images; extraction was performed on the Google Earth Engine (GEE) platform. The datasets were analyzed using Bayesian Change Point (BCP) to monitor the abrupt changes in vegetation dynamics associated with deforestation. The BCP shows the magnitude of changes over the years, from the posterior data obtained. BCP focuses on changes in the long‐range using Markov Chain Monte Carlo (MCMC) methods, this returns posterior probability at > 0.5% of a change point occurring at each time index in the time series. Three decades of Landsat data were classified using the random forest algorithm to assess the rate of deforestation within the study area. The results shows forest in 2000 (97.7%), 2010 (89.4%), 2020 (84.7%) and non-forest increase 2000 (2.0%), 2010 (10.6%), 2020 (15.3%). Kappa coefficient was also used to determine the accuracy of the classification.

scholarly journals Mapping of Cotton Fields Within-Season Using Phenology-Based Metrics Derived from a Time Series of Landsat Imagery

2020 ◽  
Vol 12 (18) ◽  
pp. 3038
Author(s):  
Dhahi Al-Shammari ◽  
Ignacio Fuentes ◽  
Brett M. Whelan ◽  
Patrick Filippi ◽  
Thomas F. A. Bishop
Keyword(s):  
Time Series ◽  
Vegetation Index ◽  
Landsat Imagery ◽  
Google Earth ◽  
Growth Stages ◽  
Landsat 8 ◽  
Crop Type ◽  
Eastern Australia ◽  
Normalised Difference Vegetation Index ◽  
Cotton Fields

A phenology-based crop type mapping approach was carried out to map cotton fields throughout the cotton-growing areas of eastern Australia. The workflow was implemented in the Google Earth Engine (GEE) platform, as it is time efficient and does not require processing in multiple platforms to complete the classification steps. A time series of Normalised Difference Vegetation Index (NDVI) imagery were generated from Landsat 8 Surface Reflectance Tier 1 (L8SR) and processed using Fourier transformation. This was used to produce the harmonised-NDVI (H-NDVI) from the original NDVI, and then phase and amplitude values were generated from the H-NDVI to visualise active cotton in the targeted fields. Random Forest (RF) models were built to classify cotton at early, mid and late growth stages to assess the ability of the model to classify cotton as the season progresses, with phase, amplitude and other individual bands as predictors. Results obtained from leave-one-season-out cross validation (LOSOCV) indicated that Overall Accuracy (OA), Kappa, Producer’s Accuracies (PA) and User’s Accuracy (UA), increased significantly when adding amplitude and phase as predictor variables to the model, than prediction using H-NDVI or raw bands only. Commission and omission errors were reduced significantly as the season progressed and more in-season imagery was available. The methodology proposed in this study can map cotton crops accurately based on the reconstruction of the unique cotton reflectance trajectory through time. This study confirms the importance of phenological metrics in improving in-season cotton fields mapping across eastern Australia. This model can be used in conjunction with other datasets to forecast yield based on the mapped crop type for improved decision making related to supply chain logistics and seasonal outlooks for production.

scholarly journals Automatic Land-Cover Mapping using Landsat Time-Series Data based on Google Earth Engine

2019 ◽  
Vol 11 (24) ◽  
pp. 3023 ◽  
Author(s):  
Shuai Xie ◽  
Liangyun Liu ◽  
Xiao Zhang ◽  
Jiangning Yang ◽  
Xidong Chen ◽  
...  
Keyword(s):  
Time Series ◽  
Land Cover ◽  
Vegetation Index ◽  
Time Series Data ◽  
Land Cover Classification ◽  
Google Earth ◽  
Thematic Mapper ◽  
Series Data ◽  
Land Cover Mapping ◽  
Google Earth Engine

The Google Earth Engine (GEE) has emerged as an essential cloud-based platform for land-cover classification as it provides massive amounts of multi-source satellite data and high-performance computation service. This paper proposed an automatic land-cover classification method using time-series Landsat data on the GEE cloud-based platform. The Moderate Resolution Imaging Spectroradiometer (MODIS) land-cover products (MCD12Q1.006) with the International Geosphere–Biosphere Program (IGBP) classification scheme were used to provide accurate training samples using the rules of pixel filtering and spectral filtering, which resulted in an overall accuracy (OA) of 99.2%. Two types of spectral–temporal features (percentile composited features and median composited monthly features) generated from all available Landsat Thematic Mapper (TM) and Enhanced Thematic Mapper Plus (ETM+) data from the year 2010 ± 1 were used as input features to a Random Forest (RF) classifier for land-cover classification. The results showed that the monthly features outperformed the percentile features, giving an average OA of 80% against 77%. In addition, the monthly features composited using the median outperformed those composited using the maximum Normalized Difference Vegetation Index (NDVI) with an average OA of 80% against 78%. Therefore, the proposed method is able to generate accurate land-cover mapping automatically based on the GEE cloud-based platform, which is promising for regional and global land-cover mapping.

scholarly journals A Simple Approach for Mapping Forest Cover from Time Series of Satellite Data

2020 ◽  
Vol 12 (18) ◽  
pp. 2918
Author(s):  
Yang Liu ◽  
Ronggao Liu
Keyword(s):  
Time Series ◽  
Vegetation Index ◽  
Forest Cover ◽  
Google Earth ◽  
Satellite Observations ◽  
Training Data ◽  
Herbaceous Vegetation ◽  
Forest Mapping ◽  
Maturity Period ◽  
Forest Cover Mapping

Forest cover mapping based on multi-temporal satellite observations usually uses dozens of features as inputs, which requires huge training data and leads to many ill effects. In this paper, a simple but efficient approach was proposed to map forest cover from time series of satellite observations without using classifiers and training data. This method focuses on the key step of forest mapping, i.e., separation of forests from herbaceous vegetation, considering that the non-vegetated area can be easily identified by the annual maximum vegetation index. We found that the greenness of forests is generally stable during the maturity period, but a similar greenness plateau does not exist for herbaceous vegetation. It means that the mean greenness during the vegetation maturity period of forests should be larger than that of herbaceous vegetation, while its standard deviation should be smaller. A combination of these two features could identify forests with several thresholds. The proposed approach was demonstrated for mapping the extents of different forest types with MODIS observations. The results show that the overall accuracy ranges 91.92–95.34% and the Kappa coefficient is 0.84–0.91 when compared with the reference datasets generated from fine-resolution imagery of Google Earth. The proposed approach can greatly simplify the procedures of forest cover mapping.

scholarly journals Recurrence Analysis of Vegetation Indices for Highlighting the Ecosystem Response to Drought Events: An Application to the Amazon Forest

2020 ◽  
Vol 12 (6) ◽  
pp. 907 ◽  
Author(s):  
Teodoro Semeraro ◽  
Andrea Luvisi ◽  
Antonio O. Lillo ◽  
Roberta Aretano ◽  
Riccardo Buccolieri ◽  
...  
Keyword(s):  
Time Series ◽  
Land Surface ◽  
Vegetation Index ◽  
Southern Oscillation ◽  
Vegetation Indices ◽  
Atlantic Multidecadal Oscillation ◽  
Enso Event ◽  
Amazon Forest ◽  
Ecosystem Response ◽  
Water Index

Forests are important in sequestering CO2 and therefore play a significant role in climate change. However, the CO2 cycle is conditioned by drought events that alter the rate of photosynthesis, which is the principal physiological action of plants in transforming CO2 into biological energy. This study applied recurrence quantification analysis (RQA) to describe the evolution of photosynthesis-related indices to highlight disturbance alterations produced by the Atlantic Multidecadal Oscillation (AMO, years 2005 and 2010) and the El Niño-Southern Oscillation (ENSO, year 2015) in the Amazon forest. The analysis was carried out using Moderate Resolution Imaging Spectroradiometer (MODIS) images to build time series of the enhanced vegetation index (EVI), the normalized difference water index (NDWI), and the land surface temperature (LST) covering the period 2001–2018. The results did not show significant variations produced by AMO throughout the study area, while a disruption due to the global warming phase linked to the extreme ENSO event occurred, and the forest was able to recover. In addition, spatial differences in the response of the forest to the ENSO event were found. These findings show that the application of RQA to the time series of vegetation indices supports the evaluation of the forest ecosystem response to disruptive events. This approach provides information on the capacity of the forest to recover after a disruptive event and, therefore is useful to estimate the resilience of this particular ecosystem.

scholarly journals Assessing the Impact of Satellite Revisit Rate on Estimation of Corn Phenological Transition Timing through Shape Model Fitting

2019 ◽  
Vol 11 (21) ◽  
pp. 2558 ◽  
Author(s):  
Emily Myers ◽  
John Kerekes ◽  
Craig Daughtry ◽  
Andrew Russ
Keyword(s):  
Time Series ◽  
Vegetation Index ◽  
Time Series Data ◽  
Model Fitting ◽  
Series Data ◽  
Sigmoid Function ◽  
Absolute Deviation ◽  
Shape Model ◽  
Area Index ◽  
The Impact

Agricultural monitoring is an important application of earth-observing satellite systems. In particular, image time-series data are often fit to functions called shape models that are used to derive phenological transition dates or predict yield. This paper aimed to investigate the impact of imaging frequency on model fitting and estimation of corn phenological transition timing. Images (PlanetScope 4-band surface reflectance) and in situ measurements (Soil Plant Analysis Development (SPAD) and leaf area index (LAI)) were collected over a corn field in the mid-Atlantic during the 2018 growing season. Correlation was performed between candidate vegetation indices and SPAD and LAI measurements. The Normalized Difference Vegetation Index (NDVI) was chosen for shape model fitting based on the ground truth correlation and initial fitting results. Plot-average NDVI time-series were cleaned and fit to an asymmetric double sigmoid function, from which the day of year (DOY) of six different function parameters were extracted. These points were related to ground-measured phenological stages. New time-series were then created by removing images from the original time-series, so that average temporal spacing between images ranged from 3 to 24 days. Fitting was performed on the resampled time-series, and phenological transition dates were recalculated. Average range of estimated dates increased by 1 day and average absolute deviation between dates estimated from original and resampled time-series data increased by 1/3 of a day for every day of increase in average revisit interval. In the context of this study, higher imaging frequency led to greater precision in estimates of shape model fitting parameters used to estimate corn phenological transition timing.

Assessment of different indices from Landsat time series in burned area mapping

2020 ◽  
Author(s):  
Jinxiu Liu
Keyword(s):  
Time Series ◽  
Burkina Faso ◽  
Land Surface ◽  
Vegetation Index ◽  
Landsat Imagery ◽  
Burned Area ◽  
Free Access ◽  
Landsat Images ◽  
Area Index ◽  
Burned Area Mapping

<p>Fire is recognized as an important land surface disturbance, as it influences terrestrial carbon cycle, climate and biodiversity. Accurate and efficient mapping of burned area is beneficial for social and environmental applications. Remote sensing plays a key role in detecting burned areas and active fires from reginal to global scales. Due to the free access to the Landsat archive, studies using dense time series of Landsat imagery for burned area mapping are appearing and increasing. However, the performance of Landsat time series when using different indices for burned area mapping has not been assessed. In this study, the objective was to identify which indices can detect burned area better when using Landsat time series in savanna area of southern Burkina Faso. We selected Burned Area Index (BAI), Normalized Burned Ratio (NBR), Normalized Difference Vegetation Index (NDVI), Global Environmental Monitoring Index (GEMI) for comparison as they are commonly used indices for burned area detection. The algorithm was based on breakpoint identification and burned pixel detection using harmonic model fitting with different indices Landsat time series. It was tested in savanna area in southern Burkina Faso over 16 years with 281 Landsat images ranging from October 2000 to April 2016.The same reference data was used to evaluate the performance of burned area detection with different indices Landsat time series. The result demonstrated that BAI was the most accurate in burned area detection from Landsat time series, followed by NBR, GEMI and NDVI.</p>

Recent increase in prevalence of antibodies to Dobrava-Belgrade virus (DOBV) in yellow-necked mice in northern Italy

2014 ◽  
Vol 143 (10) ◽  
pp. 2241-2244 ◽  
Author(s):  
A. RIZZOLI ◽  
V. TAGLIAPIETRA ◽  
R. ROSÀ ◽  
H. C. HAUFFE ◽  
G. MARINI ◽  
...  
Keyword(s):  
Linear Models ◽  
Case Fatality ◽  
Northern Italy ◽  
Maximum Temperature ◽  
Mean Annual Precipitation ◽  
Sudden Increase ◽  
Temperature And Precipitation ◽  
Changes In Risk ◽  
Positive Effect ◽  
Individual Body

SUMMARYDobrava-Belgrade virus (DOBV) is the most pathogenic hantavirus in Europe with a case-fatality rate of up to 12%. To detect changes in risk for humans, the prevalence of antibodies to DOBV has been monitored in a population of Apodemus flavicollis in the province of Trento (northern Italy) since 2000, and a sudden increase was observed in 2010. In the 13-year period of this study, 2077 animals were live-trapped and mean hantavirus seroprevalence was 2·7% (s.e. = 0·3%), ranging from 0% (in 2000, 2002 and 2003) to 12·5% (in 2012). Climatic (temperature and precipitation) and host (rodent population density, rodent weight and sex, and larval tick burden) variables were analysed using Generalized Linear Models and multi-model inference to select the best model. Climatic changes (mean annual precipitation and maximum temperature) and individual body mass had a positive effect on hantavirus seroprevalence. Other possible drivers affecting the observed pattern need to be studied further.

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