ScFT6: A Putative Candidate for Sugarcane Floral Inducer

2021 ◽  
Author(s):  
Manoel Viana Linhares-Neto ◽  
Pedro Vitor Schumacher ◽  
Thales Henrique Cherubino Ribeiro ◽  
Carlos Henrique Cardon ◽  
Pâmela Marinho Resende ◽  
...  
Keyword(s):  
Flowering Time ◽  
Regulatory Networks ◽  
Floral Induction ◽  
Orthologous Gene ◽  
Time Behavior ◽  
Variable Expression ◽  
Binding Protein Gene ◽  
Sugarcane Productivity ◽  
Phosphatidylethanolamine Binding Protein

Abstract One of the factors that can decrease sugarcane productivity is the flowering, because it affects the quantity and quality of feedstock, due to sucrose consumption from the stem during inflorescence emission. Photoperiodicity is the main environmental factor involved in sugarcane floral induction, which occurs by the integration of gene regulatory networks in response to environmental and endogenous stimuli. One of the genes involved in those regulatory networks is the FLOWERING LOCUS T (FT), which is considered a phloem-mobile signal that stimulates floral induction in the shoot apical meristem. This work aimed to identify and characterize homologs of the FT gene in sugarcane, as well as to determine the putative function of these genes during floral induction. From this perspective, we have conducted in silico analyses of putative FT orthologs in sugarcane, as well as the expression levels in different photoperiodic conditions in a 24-hours-day-cycle of ScFT6 in different plant tissues in contrasting cultivars in terms of flowering time. Three new possible FT orthologs were found with high similarity to FT homologs in other species. Among three genes identified, we highlighted ScFT6, which has a conserved domain and amino acids at characteristic positions for the flowering inducer phosphatidylethanolamine-binding protein gene family. Additionally, its expression occurs according to coincidental model, possibly being controlled by the circadian clock. Cultivars with distinct flowering time behavior display variable expression for the ScFT6 gene, suggesting a possible genotypic relationship for its expression. Therefore, sugarcane has at least one putative orthologous gene in relation to FT that promotes floral induction.

Antagonistic actions of Arabidopsis cryptochromes and phytochrome B in the regulation of floral induction

Development ◽  
1999 ◽  
Vol 126 (10) ◽  
pp. 2073-2082 ◽  
Author(s):  
T.C. Mockler ◽  
H. Guo ◽  
H. Yang ◽  
H. Duong ◽  
C. Lin
Keyword(s):  
Flowering Time ◽  
Blue Light ◽  
Molecular Mechanisms ◽  
Light Quality ◽  
Floral Induction ◽  
Red Light ◽  
Floral Initiation ◽  
Sensitive Phase ◽  
Light Inhibition

The Arabidopsis photoreceptors cry1, cry2 and phyB are known to play roles in the regulation of flowering time, for which the molecular mechanisms remain unclear. We have previously hypothesized that phyB mediates a red-light inhibition of floral initiation and cry2 mediates a blue-light inhibition of the phyB function. Studies of the cry2/phyB double mutant provide direct evidence in support of this hypothesis. The function of cryptochromes in floral induction was further investigated using the cry2/cry1 double mutants. The cry2/cry1 double mutants showed delayed flowering in monochromatic blue light, whereas neither monogenic cry1 nor cry2 mutant exhibited late flowering in blue light. This result suggests that, in addition to the phyB-dependent function, cry2 also acts redundantly with cry1 to promote floral initiation in a phyB-independent manner. To understand how photoreceptors regulate the transition from vegetative growth to reproductive development, we examined the effect of sequential illumination by blue light and red light on the flowering time of plants. We found that there was a light-quality-sensitive phase of plant development, during which the quality of light exerts a profound influence on flowering time. After this developmental stage, which is between approximately day-1 to day-7 post germination, plants are committed to floral initiation and the quality of light has little effect on the flowering time. Mutations in either the PHYB gene or both the CRY1 and CRY2 genes resulted in the loss of the light-quality-sensitive phase manifested during floral development. The commitment time of floral transition, defined by a plant's sensitivity to light quality, coincides with the commitment time of inflorescence development revealed previously by a plant's sensitivity to light quantity - the photoperiod. Therefore, the developmental mechanism resulting in the commitment to flowering appears to be the direct target of the antagonistic actions of the photoreceptors.

scholarly journals Managing flowering time in Miscanthus and sugarcane to facilitate intra- and intergeneric crosses

PLoS ONE ◽  
2021 ◽  
Vol 16 (1) ◽  
pp. e0240390
Author(s):  
Hongxu Dong ◽  
Lindsay V. Clark ◽  
Xiaoli Jin ◽  
Kossonou Anzoua ◽  
Larisa Bagmet ◽  
...  
Keyword(s):  
Flowering Time ◽  
High Latitude ◽  
Floral Induction ◽  
Day Treatment ◽  
Day Length ◽  
Close Relative ◽  
Short Day ◽  
Culm Length ◽  
Low Latitudes ◽  
Short Days

Miscanthus is a close relative of Saccharum and a potentially valuable genetic resource for improving sugarcane. Differences in flowering time within and between Miscanthus and Saccharum hinders intra- and interspecific hybridizations. A series of greenhouse experiments were conducted over three years to determine how to synchronize flowering time of Saccharum and Miscanthus genotypes. We found that day length was an important factor influencing when Miscanthus and Saccharum flowered. Sugarcane could be induced to flower in a central Illinois greenhouse using supplemental lighting to reduce the rate at which days shortened during the autumn and winter to 1 min d-1, which allowed us to synchronize the flowering of some sugarcane genotypes with Miscanthus genotypes primarily from low latitudes. In a complementary growth chamber experiment, we evaluated 33 Miscanthus genotypes, including 28 M. sinensis, 2 M. floridulus, and 3 M. ×giganteus collected from 20.9° S to 44.9° N for response to three day lengths (10 h, 12.5 h, and 15 h). High latitude-adapted M. sinensis flowered mainly under 15 h days, but unexpectedly, short days resulted in short, stocky plants that did not flower; in some cases, flag leaves developed under short days but heading did not occur. In contrast, for M. sinensis and M. floridulus from low latitudes, shorter day lengths typically resulted in earlier flowering, and for some low latitude genotypes, 15 h days resulted in no flowering. However, the highest ratio of reproductive shoots to total number of culms was typically observed for 12.5 h or 15 h days. Latitude of origin was significantly associated with culm length, and the shorter the days, the stronger the relationship. Nearly all entries achieved maximal culm length under the 15 h treatment, but the nearer to the equator an accession originated, the less of a difference in culm length between the short-day treatments and the 15 h day treatment. Under short days, short culms for high-latitude accessions was achieved by different physiological mechanisms for M. sinensis genetic groups from the mainland in comparison to those from Japan; for mainland accessions, the mechanism was reduced internode length, whereas for Japanese accessions the phyllochron under short days was greater than under long days. Thus, for M. sinensis, short days typically hastened floral induction, consistent with the expectations for a facultative short-day plant. However, for high latitude accessions of M. sinensis, days less than 12.5 h also signaled that plants should prepare for winter by producing many short culms with limited elongation and development; moreover, this response was also epistatic to flowering. Thus, to flower M. sinensis that originates from high latitudes synchronously with sugarcane, the former needs day lengths >12.5 h (perhaps as high as 15 h), whereas that the latter needs day lengths <12.5 h.

Repeated rearrangement of the GSL‐AOP locus contributed to spatio‐temporal variation in defense chemistry in Arabidopsis

2020 ◽  
Author(s):  
Konrad Weber ◽  
Lucasz Krych ◽  
Meike Burow
Keyword(s):  
Flowering Time ◽  
Regulatory Networks ◽  
Structural Diversity ◽  
Sequence Information ◽  
Sequencing Data ◽  
Defense Compounds ◽  
Caucasus Region ◽  
Time Control ◽  
Spatio Temporal ◽  
Flowering Time Control

Abstract Plants coordinate metabolic and developmental processes with the help of genetically variable, interconnected regulatory networks. The GSL-AOP locus in Arabidopsis thaliana encodes enzymes involved in the biosynthesis of glucosinolate defense compounds and has been attributed regulatory functions e.g. in flowering time control. To correlate genetic and phenotypic variation linked to GSL-AOP, we conducted a phylogenetic analysis across 1135 accessions and found that the available short-read sequencing data does not fully resolve the structural diversity in the locus. We analyzed a selection of 74 accessions for glucosinolate profiles and flowering time under different conditions and acquired long-read sequence information for glucosinolate and flowering time loci. Especially in the Caucasus region, structural variation in GSL-AOP was associated with conditional, tissue-specific glucosinolate profiles. Variation in FLC among the Caucasian accessions correlated with variation in the flowering time response to vernalization, suggesting that local adaptation has shaped defense and development in an orchestrated manner.

scholarly journals Evidence for convergent evolution of SINE-directed Staufen-mediated mRNA decay

2018 ◽  
Vol 115 (5) ◽  
pp. 968-973 ◽  
Author(s):  
Bronwyn A. Lucas ◽  
Eitan Lavi ◽  
Lily Shiue ◽  
Hana Cho ◽  
Sol Katzman ◽  
...  
Keyword(s):  
Convergent Evolution ◽  
Regulatory Networks ◽  
Parallel Evolution ◽  
Orthologous Gene ◽  
Control Networks ◽  
Short Interspersed Elements ◽  
Gene Pairs ◽  
Sine Insertion ◽  
Rapid Divergence ◽  
Species Specific

Primate-specific Alu short interspersed elements (SINEs) as well as rodent-specific B and ID (B/ID) SINEs can promote Staufen-mediated decay (SMD) when present in mRNA 3′-untranslated regions (3′-UTRs). The transposable nature of SINEs, their presence in long noncoding RNAs, their interactions with Staufen, and their rapid divergence in different evolutionary lineages suggest they could have generated substantial modification of posttranscriptional gene-control networks during mammalian evolution. Some of the variation in SMD regulation produced by SINE insertion might have had a similar regulatory effect in separate mammalian lineages, leading to parallel evolution of the Staufen network by independent expansion of lineage-specific SINEs. To explore this possibility, we searched for orthologous gene pairs, each carrying a species-specific 3′-UTR SINE and each regulated by SMD, by measuring changes in mRNA abundance after individual depletion of two SMD factors, Staufen1 (STAU1) and UPF1, in both human and mouse myoblasts. We identified and confirmed orthologous gene pairs with 3′-UTR SINEs that independently function in SMD control of myoblast metabolism. Expanding to other species, we demonstrated that SINE-directed SMD likely emerged in both primate and rodent lineages >20–25 million years ago. Our work reveals a mechanism for the convergent evolution of posttranscriptional gene regulatory networks in mammals by species-specific SINE transposition and SMD.

scholarly journals KUALITAS SUBYEKTIF SIPUS V3 DAN INFORMASI KELUARANNYA SEBAGAI PENDUKUNG KEPUTUSAN

2015 ◽  
Vol 4 (2) ◽  
Author(s):  
Maryono Maryono ◽  
Tri Septiyantono
Keyword(s):  
Decision Making ◽  
Software Quality ◽  
Information Quality ◽  
Statistical Information ◽  
Subjective Quality ◽  
Time Behavior ◽  
Library Automation ◽  
Planning Policy ◽  
Indicator Score

This research entitled "The Subjective Quality of Sipus V3 software and its Information Output as a Support for Decision Making" was motivated by several problems happening during two years in the application of the software. Such automation software is expected to be able to support the success of library services and to produce statistical information for a decision making. The research aims to find out the quality of Sipus V3 software and its statistical information output, and the use of the output for supporting decision making. The research describes the subjective quality of Sipus V3 software, its statistical information output, and the use of the output in decision making process. The research employs a questionnaire method to collect data and its respondents are 44 librarians involving in Sipus V3 and 26 persons working at the information management department responsible for the statistic output of Sipus V3. By using a mean method for each indicator value, the result of the research shows that the high indicator score of Sipus V3 software quality as follows: usability-operability 3,75; efficiency of resources 3,75; efficiency of time behavior 3,68; usability-understandability 3,64; functionality-suitability 3,55; maintainability-stability for the rules of lending period and the number of items borrowed 3,43; reliabilityrecoverability 3,30; and maintainability-stability for holiday/closing days 3,20. In contrast, the low indicator score can be seen in the following: functionality-accuracy 2,84; and reliability-maturity 2,68. Furthermore the indicator score of Sipus V3 statistical information which is high is timeliness 3,31; conciseness 3,23; relevancy 3,15; and completeness 3,15. Whereas the low indicator score is accuracy 2,92. The use of Sipus V3 statistical information is very low, i.e. planning policy of circulation services 2,96; planning policy of collection development 2,88; library planning 2,69; and staffing for circulation staff 2,65. Keywords : library automation, software quality, information quality, decision support system

scholarly journals SHADE AFFECTS YIELD AND QUALITY OF HAZELNUTS

HortScience ◽  
1992 ◽  
Vol 27 (6) ◽  
pp. 667g-668
Author(s):  
Cheryl R. Hampson ◽  
Anita N. Azarenko ◽  
Rebecca McCluskey ◽  
Jeffery Olsen
Keyword(s):  
Floral Induction ◽  
Corylus Avellana ◽  
Deciduous Tree ◽  
Kernel Size ◽  
Light Requirement ◽  
Yield Efficiency ◽  
Fruit Species ◽  
Yield And Quality ◽  
Tree Fruit

Many deciduous tree fruit species have a light requirement for floral induction. Floral induction of hazelnut has been reported to occur through the end of May into July. At the end of May, less than 5% full sun reaches the base of the canopy in a mature hazelnut orchard. Leaf area density was estimated to be 7.6. Six levels of shade (0, 30, 47, 63, 73, or 92%) were imposed on caged 7-year-old hazelnut trees (Corylus avellana L. cv. Ennis) to determine effects of shade on yield and nut quality. Shading reduced yield of nuts per tree from 3.43 kg in 0% shade to 0.62 kg in 92% shade and yield efficiency from 70.2 g/cm2 in full sun to 18.3 g/cm2 in 92% shade. Yield and yield efficiency decreased substantially in 30% shade. When shade exceeded 47%, nut and kernel size decreased sharply, but % kernel increased slightly. In comparison to trees in full sun, shaded trees had a higher incidence of moldy or shrivelled kernels and a lower incidence of blanks.

scholarly journals KRUCIAL- All in One Delivery Web Application

2021 ◽  
Vol 9 (12) ◽  
pp. 692-698
Author(s):  
Sumit Kumar Das
Keyword(s):  
Web Application ◽  
Time Behavior ◽  
Delivery Time ◽  
Feedback Form ◽  
Product Price ◽  
Online Pharmacy

Abstract: This is a website for searching availability of any stationary product in the nearby stationary stores of the user, now including the online pharmacy feature and then the user can place the order in any of those stores. The user will enter the product name required. After searching for the availability of that product in the nearby store, the result will be shown (including a description of the product, price of the product, etc). Then the user can compare the price and quality of the product. After that, the user can choose a store from where they want to order the required product. The users can directly explore the website and can continue shopping. And once the order gets confirmed from the store the user will receive confirmation details. Once the order gets delivered the user will receive a feedback form about the experience of shopping with our website and also the delivery time, behavior of that delivery person. The user can also rate and write reviews on our website about the store they have placed their order.

Sign in / Sign up

Export Citation Format

Share Document