scholarly journals Dynamics of lamb coccidiosis in indoor management systems

2018 ◽  
Vol 74 (8) ◽  
pp. 507-511
Author(s):  
KLAUDIUSZ SZCZEPANIAK ◽  
MARIA STUDZIŃSKA ◽  
ANDRZEJ JUNKUSZEW ◽  
ANNA ŁOJSZCZYK-SZCZEPANIAK ◽  
TOMASZ GRUSZECKI ◽  
...  

Invasions of protozoa belonging to the genus Eimeria are a global problem in sheep farming. The clinical course of eimeriosis occurs almost exclusively in lambs. In adult sheep coccydiosis often has an asymptomatic course which, however, is not without an impact on animal conditions. Large flock density and related contamination of the environment with oocysts is conducive to a high extensiveness of the invasion. The aim of the study was to analyze the prevalence and intensity of Eimeria invasion in lambs kept in confined management systems in order to establish the key periods of the course of invasions and schedules for prevention programs. The parasitological examination was conducted on samples of feces collected directly from the rectum of 96 lambs every 14 days at the following time points: the 28th, 42nd, 56th, 70th and 100th days of life. The assessment involved the invasion extensity established using a flotation method and invasion intensity expressed as the number of oocysts per gram of feces (OPG) established by using the McMaster technique. On the basis of morphometric parameters of isolated oocysts, the species of coccidia in the studied animals were determined. During the whole study period, the invasion extensity grew from the minimum of 17.6% (CI ± 95%; 9.6-25.6) on day 28 to the maximum of 95.9% (CI ± 95%; 95.3-100.0) on day 100. The average growth in the invasion extensity in the flock was 19.6% every 14 days. The average invasion intensity in the study period was 3039.2 OPG (min-max 50-58,800; SEM 440.2), with the highest excretion of oocysts observed on day 42 of the lambs’ life. The average OPG value on this day was 6783.8, and dropped at subsequent measurement points. The experiment revealed exclusively multi-species invasions. In total, seven species of coccidia were found in the studied animals within the study period. These were: E. bakuensis, E. faurei, E. intricata, E. ovinoidalis, E. pallida, E. parva and E. crandallis..

2019 ◽  
Vol 21 (Supplement_6) ◽  
pp. vi170-vi171
Author(s):  
Jay Patel ◽  
Andrew Beers ◽  
Ken Chang ◽  
James Brown ◽  
Katharina Hoebel ◽  
...  

Abstract PURPOSE Measuring treatment response is vital for assessing efficacy of treatment regimen for patients with brain metastases (BM). Unfortunately, manual delineation of all lesions on MRI across time-points is prohibitively time-consuming, making it infeasible to track individual lesion growth/shrinkage rates as part of the clinical workflow. To overcome this challenge, we propose a deep learning approach to segment all BM, and furthermore, show that certain brain regions are more prone to high-growth rate lesions. METHODS 163 longitudinal MRIs from 77 patients with MPRAGE-post contrast imaging protocol were prospectively obtained from Massachusetts General Hospital (MGH). An expert neuro-oncologist provided ground truth segmentations for all patients. A 3D U-Net architecture was trained to automatically segment BM; training was stopped when validation set Dice score plateaued to prevent overfitting. To enable lesion tracking, all time-points per patient were affinely registered to each other. Every lesion was subsequently classified based on its growth rate (responder: overall lesion shrinkage; inconclusive: 0% to 40% lesion growth; non-responder: more than 40% lesion growth). Characterization of global lesion growth rate patterns was accomplished by affinely registering all time-points to the MNI brain atlas. Segmented lesions were projected onto the atlas, which was qualitatively analyzed to identify spatial regions composed primarily of one class of lesion. RESULTS For automatic segmentation, we report a mean dice score of 0.778, 0.737, and 0.704 on training, validation, and testing sets respectively. Furthermore, we find that the largest BM with the highest average growth rate (non-responders) tend to be located in the posterior frontal/parietal lobes, while smaller, lower growth rate lesions (responders) tend to be localized in the frontal lobes. The posterior fossa was found to be heterogeneous in lesion size and growth rate. CONCLUSION We developed automatic metastatic lesion tracking over time-points and identified brain regions associated with differing growth rate lesions.


2021 ◽  
Vol 15 (2) ◽  
pp. 95-100
Author(s):  
A. Balicka-Ramisz ◽  
L. Laurans ◽  
M. Batko ◽  
A. Ramisz

The purpose of the research is to identify species of Eimeria spp. in chicken broilers suspected to be infected with coccidia and to determine the effect of coccidiostatics in the course of coccidiosis.Materials and methods. The study involved 20 six-week-old broiler chickens obtained from a farm heavily affected by coccidia (natural infection – a high oocyst incidence). Each group yielded 10 randomly picked chickens to be used in the experiment. The birds were divided into 2 groups 10 chickens each: control (I); Baycox-treated (II); Baycox was applied for 2 days in a concentration of 25 ppm in drinking water. Samples of broiler chickens’ droppings were tested qualitatively by the flotation method (Willis-Schlaaf) and then quantitatively by the McMaster technique. The chickens were killed 6 days post-treatment and their intestinal mean total lesion scores (MTLS) were graded 0 to 4 on an arbitrary scale described by Johnson and Reid (1970).Results and discussion. As a result of the research, six species of protozoa of the genus Eimeria were identified: E. acervulina, E. tenella, E. brunetti, E. maxima, E. mivati, E. necatrix, while E. necatrix and E. maxima were the dominant species. This proves the presence of such species as E. mivati, E. acervulina (76.34%) in the anterior segment of the intestine and E. necatrix, E. maxima (83.34%) – in the middle segment of the small intestine. Infections of E. brunetti broilers amounted to 51.11%. The most pathogenic species of E. tenella residing in the cecum was found in 37.53%. MTLS in the group of chickens that received Baycox was 0.33. The post-treatment oocyst indices in the second group amounted to 1 (1–50 oocysts in 1 g of faeces), in the control group MTLS was very high (2,5), the oocyst index exceeding 3. 


Blood ◽  
2015 ◽  
Vol 126 (23) ◽  
pp. 709-709 ◽  
Author(s):  
Hideki Makishima ◽  
Kenichi Yoshida ◽  
Thomas LaFramboise ◽  
Tetsuichi Yoshizato ◽  
Matthew Ruffalo ◽  
...  

Abstract MDS and related disorders, including MDS/MPN and sAML that evolved from these conditions constitute disease continuum characterized by a wide spectrum of molecular lesions which often overlap. Here, we defined general mutational spectrum and clonal architecture in a large cohort (n=718) of MDS studied by whole exome sequencing (WES) and target deep sequencing. Within this cohort 97 cases were studied at multiple time points to clarify the clinical impact of clonal dynamics on phenotype commitment or outcomes. All samples were obtained after informed consent, according to protocols approved by the respective ethics boards of the participating institutions. When mean and maximum variant allele frequency (VAF) for whole mutations were at one time-point evaluated in disease phenotypes, significantly higher averaged values suggested their larger clones in sAML and CMML compared to MDS. Clustering analysis of multiple mutational events by Pyclone software discriminated the cases with multiple mutational clones (positive heterogeneity) and those with a single expansion of MDS clone (no heterogeneity detected). Over 80% of low-risk MDS and all the sAML harbored multiple clusters of mutations. These results suggest that intra-tumor heterogeneity of MDS is most likely due to various sizes of clonal and subclonal mutations, likely impacting clinical behavior. To delineate clonal dynamics in MDS, we assessed mutational burden and their temporal changes in serially collected samples (n=97). Among these, Pyclone analysis was applied to exome sequencing at two time points (n=11 pairs). All cases showed various mutational clusters with individual expansions and declines, including initially present, newly acquired or disappearing during clinical course. Initial subclones were identified at disease presentation in 55% of cases, of which in 86% the subclones expanded to occupy whole MDS population with clonal sweep. New subclones acquired during clinical course were identified in 91%, in which 60% cases harbored clonal sweep. Disappearing clones were observed in 55% of cases. Next, we applied clustering analysis on clonal size of driver mutations evaluated at multiple time points (n=97 cases) to categorize the most frequently mutated genes into 3 subtypes. Mutational burden of PTPN11 most frequently increased and were associated with leukemic evolution (an example of type I gene). Similarly, CBL, NRAS, STAG2, RUNX1, and IDH1 were categorized into the type I genes, demonstrating increased clonal size resulting in the evolutions into high-risk phenotypes. Although JAK2 mutations were related to the stable clinical course when the mutational burden decreased, cases with highly expanded JAK2 mutations resulted in leukemic evolution (occasional evolution or expansions; type II gene). DNMT3A, SRSF2, TP53, U2AF1, and ASXL1 mutations were also categorized into such type II consequences with occasional progression. The last category (type III) included clonal/founder genes EZH2, TET2, SF3B1 and PRPF8, demonstrating random shifts of clonal size and lack of association with leukemic evolution. The proposed hierarchical categorization correlates with clinical parameters. Cases with the increasing burden of type I gene mutations showed most significant increases in myeloblasts. Overall survival measured from second sampling time points in the cases with increasing type I mutations was significantly shorter in the whole cohort (HR=2.05, 95%CI; 1.14-3.79, P=0.016) and in the cases solely with IPSS INT-1 (HR=2.37, 95%CI; 1.01-5.97, P=0.048). Subcohorts classified according to the presence or absence of increasing type I mutations did not differ with regard to the IPSS categories. In contrast, increased mutational burden of type II and III genes did not correlated with any of the clinical parameters examined, even though some gene mutations including TP53, EZH2, and U2AF1 represented poor prognostic factors at disease presentation. In conclusion, this work demonstrates that detailed understanding of clonal dynamics allows for new insights into clinical significance of somatic mutations, made possible only by serial sample sequencing at multiple time points. Increasing clonal burden of extracted genes associated with predictive prognostic impact should be prospectively validated in more uniform and larger cohort of MDS. Disclosures Sekeres: TetraLogic: Membership on an entity's Board of Directors or advisory committees; Celgene Corporation: Membership on an entity's Board of Directors or advisory committees; Amgen: Membership on an entity's Board of Directors or advisory committees. Shih:Novartis: Research Funding.


Blood ◽  
2015 ◽  
Vol 126 (23) ◽  
pp. 4616-4616
Author(s):  
Maria Ciccone ◽  
Maurizio Cavallari ◽  
Simonetta Falzoni ◽  
Francesco Cavazzini ◽  
Olga Sofritti ◽  
...  

Abstract Introduction Hemophagocytic Lymphohistiocytosis (HLH) is a rare disorder characterized by an ineffective T-cell and NK response resulting in an exuberant cytokine production. Ibrutinib is an oral irreversible inhibitor of Bruton Tyrosine Kinase (Btk) significantly improving objective responses in patients with relapsed/refractory Chronic Lymphocytic Leukemia (CLL). We report the diagnostic work up and the clinical course of a case of HLH occurring in a patient with relapsed CLL during treatment with ibrutinib. Case report: the patient was a 77-years-old male diagnosed with CLL at the age of 70. At time diagnosis, the disease presented with unfavorable prognostic markers (CD38pos, ZAP70pos and unmutated IGVH). Two years later, the patient developed progressive lymphoadenopathy and a fludarabine-based regimen was administered. No objective response was observed and multiple lines of treatment attained only partial short lasting responses. In the presence of refractory disease with del17p Ibrutinib at a daily dose of 420 mg was started. On day 7 of treatment, febrile neutropenia occurred that did not benefit from antibiotics therapy. Due to persistent fever and deterioration of the clinical picture on day 16, Ibrutinib was hold and the patient hospitalized. Blood counts progressively dropped and disseminated intravascular coagulation complicated the clinical course. Additionaly, splenomegaly, hypertriglyceridemia and unexplainable severe hyperferritinemia (23,023 ng/mL) were encountered. The occurrence of 5 out of 8 diagnostic criteria allowed for a diagnosis of HLH to be made and treatment with dexamethasone, in combination with cyclosporin A and intravenous immunoglobulin, was started (Figure 1). We performed viral genome load and cytokine dosage tests on sera samples, showing high serum EBV genome title. In consideration of the activity of anticytokine treatment in the setting of HLH, the patient was treated by anti-interleukin(IL)-6 receptor Tocilizumab. Despite intensive supportive treatment, irreversible multiorgan failure developed with life-threatening bleeding and death. We retrospectively measured at two different time points the levels of interleukin (IL)1beta, IL2, IL6, IL10, IL12, IL18 and TNFalfa. In both samples, the IL1beta, IL6, IL10 and IL18 were significantly elevated compared with two healthy controls (Figure 2). Conclusion: HLH is a rare occurrence in CLL and the relationship with ibrutinib treatment is uncertain in this patient. However it is worth noting that off-target effects of ibrutinib may include downregulation of CD8/NK activity which may be involved in initiating HLH. The demonstration of IL6 elevated levels confirmed that Tocilizumb may be effective in the treatment of HLH. Figure 1. Clinical and laboratory parameters trend in a patient with CLL developing HLH. Serum ferritin and temperature were significantly elevated from hospital admission to death. Although frozen plasma, red packed cells and platelet transfusions, the fibrinogen, hemoglobin and platelet count progressively dropped. Ferritin, serum ferritin in ng/mL; plt, platelet count, x10e3/mm3; fibrinogen, plasma fibrinogen mg/dL; Hb, hemoglobin in g/dL; and T, temperature in Celsius grade (°C). Figure 1. Clinical and laboratory parameters trend in a patient with CLL developing HLH. Serum ferritin and temperature were significantly elevated from hospital admission to death. Although frozen plasma, red packed cells and platelet transfusions, the fibrinogen, hemoglobin and platelet count progressively dropped. Ferritin, serum ferritin in ng/mL; plt, platelet count, x10e3/mm3; fibrinogen, plasma fibrinogen mg/dL; Hb, hemoglobin in g/dL; and T, temperature in Celsius grade (°C). Figure 2. Cytokines levels before the administration of Tocilizumab. IL18, IL1beta, IL10, and IL6 serum levels were significantly elevated at two different time points (3512 and 3515) compared with the serum from two healthy donors (Control1, CTRL1; and control2, CTRL2). Figure 2. Cytokines levels before the administration of Tocilizumab. IL18, IL1beta, IL10, and IL6 serum levels were significantly elevated at two different time points (3512 and 3515) compared with the serum from two healthy donors (Control1, CTRL1; and control2, CTRL2). Disclosures Off Label Use: Tocilizumab for the treatment of HLH. Cuneo:Roche: Speakers Bureau; Gilead: Speakers Bureau; Jannsen: Speakers Bureau; Celgene: Speakers Bureau; Novartis: Speakers Bureau.


2005 ◽  
Vol 173 (4S) ◽  
pp. 21-21
Author(s):  
Frank Christoph ◽  
Steffen Weikert ◽  
Markus Müller ◽  
Kurt Miller

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