scholarly journals Estimation of character associations, direct and indirect effects among yield, yield component and water use efficiency traits in blackgram

2021 ◽  
Vol 9 (1) ◽  
pp. 2690-2693
Author(s):  
A Kavitha Reddy ◽  
M Shanthi Priya ◽  
D Mohan Reddy ◽  
B Ravindra Reddy
Keyword(s):  
Water Use Efficiency ◽  
Water Use ◽  
Indirect Effects ◽  
Yield Component ◽  
Direct And Indirect Effects ◽  
Use Efficiency

scholarly journals Harnessing phenotypic networks and structural equation models to improve genome-wide association analysis

2019 ◽  
Author(s):  
Mehdi Momen ◽  
Malachy T. Campbell ◽  
Harkamal Walia ◽  
Gota Morota
Keyword(s):  
Water Use Efficiency ◽  
Water Use ◽  
Indirect Effects ◽  
Root Biomass ◽  
Structural Equation ◽  
Structural Equation Models ◽  
Genome Wide Association ◽  
Direct And Indirect Effects ◽  
Genome Wide ◽  
Use Efficiency

AbstractPlant breeders and breeders alike seek to develop cultivars with maximal agronomic value. The merit of breeding material is often assessed using many, often genetically correlated traits. As intervention on one trait will affect the value of another, breeding decisions should consider the relationships between traits. With the proliferation of multi-trait genome-wide association studies (MTM-GWAS), we can infer putative genetic signals at the multivariate scale. However, a standard MTM-GWAS does not accommodate the network structure of phenotypes, and therefore does not address how the traits are interrelated. We extended the scope of MTM-GWAS by incorporating phenotypic network structures into GWAS using structural equation models (SEM-GWAS). In this network GWAS model, one or more phenotypes appear in the equations for other phenotypes as explanatory variables. A salient feature of SEM-GWAS is that it can partition the total single nucleotide polymorphism (SNP) effects into direct and indirect effects. In this paper, we illustrate the utility of SEM-GWAS using biomass, root biomass, water use, and water use efficiency in rice. We found that water use efficiency is directly impacted by biomass and water use and indirectly by biomass and root biomass. In addition, SEM-GWAS partitioned significant SNP effects influencing water use efficiency into direct and indirect effects as a function of biomass, root biomass, and water use efficiency, providing further biological insights. These results suggest that the use of SEM may enhance our understanding of complex relationships between GWAS traits.

scholarly journals Effects of Irrigation and Nitrogen Fertilization on Seed Yield, Yield Components, and Water Use Efficiency of Cleistogenes songorica

Agronomy ◽  
2021 ◽  
Vol 11 (3) ◽  
pp. 466
Author(s):  
Qibo Tao ◽  
Mengjie Bai ◽  
Cunzhi Jia ◽  
Yunhua Han ◽  
Yanrong Wang
Keyword(s):  
Water Use Efficiency ◽  
Water Use ◽  
Seed Yield ◽  
Yield Components ◽  
Perennial Grass ◽  
Yield Component ◽  
Path Coefficient ◽  
Grass Seed ◽  
Significant Difference ◽  
Use Efficiency

Irrigation and nitrogen (N) are two crucial factors affecting perennial grass seed production. To investigate the effects of irrigation and N rate on seed yield (SY), yield components, and water use efficiency (WUE) of Cleistogenes songorica (Roshevitz) Ohwi, an ecologically significant perennial grass, a four-year (2016–2019) field trial was conducted in an arid region of northwestern China. Two irrigation regimes (I1 treatment: irrigation at tillering stage; I2 treatment: irrigation at tillering, spikelet initiation, and early flowering stages) and four N rates (0, 60, 120, 180 kg ha−1) were arranged. Increasing amounts of both irrigation and N improved SY, evapotranspiration, WUE, and related yield components like fertile tillers m−2 (FTSM) and seeds spikelet−1. Meanwhile, no significant difference was observed between 120 and 180 kg N ha−1 treatments for most variables. The highest SY and WUE was obtained with treatment combination of I2 plus 120 kg N ha−1 with four-year average values of 507.3 kg ha−1 and 1.8 kg ha−1 mm−1, respectively. Path coefficient and contribution analysis indicated that FTSM was the most important yield component for SY, with direct path coefficient and contribution coefficient of 0.626 and 0.592. Overall, we recommend I2 treatment (three irrigations) together with 120 kg N ha−1 to both increase SY and WUE, especially in arid regions. Future agronomic managements and breeding programs for seed should mainly focus on FTSM. This study will enable grass seed producers, plant breeders, and government program directors to more effectively target higher SY of C. songorica.

scholarly journals Utilizing trait networks and structural equation models as tools to interpret multi-trait genome-wide association studies

Plant Methods ◽  
2019 ◽  
Vol 15 (1) ◽  
Author(s):  
Mehdi Momen ◽  
Malachy T. Campbell ◽  
Harkamal Walia ◽  
Gota Morota
Keyword(s):  
Water Use Efficiency ◽  
Water Use ◽  
Indirect Effects ◽  
Structural Equation ◽  
Structural Equation Models ◽  
Association Studies ◽  
Genome Wide Association ◽  
Genome Wide Association Studies ◽  
Genome Wide ◽  
Use Efficiency

Abstract Background Plant breeders seek to develop cultivars with maximal agronomic value, which is often assessed using numerous, often genetically correlated traits. As intervention on one trait will affect the value of another, breeding decisions should consider the relationships among traits in the context of putative causal structures (i.e., trait networks). While multi-trait genome-wide association studies (MTM-GWAS) can infer putative genetic signals at the multivariate scale, standard MTM-GWAS does not accommodate the network structure of phenotypes, and therefore does not address how the traits are interrelated. We extended the scope of MTM-GWAS by incorporating trait network structures into GWAS using structural equation models (SEM-GWAS). Here, we illustrate the utility of SEM-GWAS using a digital metric for shoot biomass, root biomass, water use, and water use efficiency in rice. Results A salient feature of SEM-GWAS is that it can partition the total single nucleotide polymorphism (SNP) effects acting on a trait into direct and indirect effects. Using this novel approach, we show that for most QTL associated with water use, total SNP effects were driven by genetic effects acting directly on water use rather that genetic effects originating from upstream traits. Conversely, total SNP effects for water use efficiency were largely due to indirect effects originating from the upstream trait, projected shoot area. Conclusions We describe a robust framework that can be applied to multivariate phenotypes to understand the interrelationships between complex traits. This framework provides novel insights into how QTL act within a phenotypic network that would otherwise not be possible with conventional multi-trait GWAS approaches. Collectively, these results suggest that the use of SEM may enhance our understanding of complex relationships among agronomic traits.

scholarly journals Rain water use efficiency of sweet potato under cattle-cud mulches in Uyo, Nigeria

2021 ◽  
Vol 6 (3) ◽  
Author(s):  
ID Edem ◽  
PI Udounang ◽  
PC Ama
Keyword(s):  
Water Use Efficiency ◽  
Sweet Potato ◽  
Water Use ◽  
Organic Matter Content ◽  
Yield Component ◽  
Matter Content ◽  
Rain Water ◽  
Sweet Potatoes ◽  
Use Efficiency ◽  
Crop Parameters

Rain Water Use Efficiency (RWUE) of sweet potato under cattle-cud mulches was investigated with the aim of identifying appropriate cattle-cud mulch rates for managing the fragile soils of the humid tropics to ensure sustained productivity of sweet potato. Experimental units measuring 9m2 each were used and sweet potato vines were planted at the spacing of 1 x 0.5m2. Cattle-cud mulches at rates of M0, M10, M20 and M30 tons ha-1 were administered to the different plots. Yield parameters of sweet potatoes as well as rainfall data for the period were collected. Data were assessed using the Analysis of Variance and correlation analyses were also performed to determine the relationships between soil and crop parameters. Results showed that RWUE of 2.38 from M30 plot was significantly higher than other treatments. This correlated with significantly (P<0.05) high tuber girth (19.0cm), tuber length (21.0cm), marketable size (32.33 cm) and number of tuber yield (60.50). Also, organic matter content of the soil receiving M10 (3.60%) and M20 (3.04%) cattle-cud mulches were significantly higher than M0 (2.96%). The use of cattle-cud as a mulch material significantly increased RWUE and also improved the yield and yield component of sweet potato.

Increasing intrinsic water-use efficiency over the past 160 years does not stimulate tree growth in southeastern China

2018 ◽  
Vol 76 (2) ◽  
pp. 115-130 ◽  
Author(s):  
G Guo ◽  
K Fang ◽  
J Li ◽  
HW Linderholm ◽  
D Li ◽  
...  
Keyword(s):  
Water Use Efficiency ◽  
Water Use ◽  
Tree Growth ◽  
Southeastern China ◽  
The Past ◽  
Intrinsic Water Use Efficiency ◽  
Use Efficiency

A comparative appraisal of urea super granule application in raised bed and prilled urea application in conventional planting for transplanted boro rice (Oryza sativa)

2016 ◽  
Vol 6 (1) ◽  
pp. 822-832
Author(s):  
Halim Mahmud Bhuyan ◽  
Most. Razina Ferdousi ◽  
Mohammad Toufiq Iqbal ◽  
Ahmed Khairul Hasan
Keyword(s):  
Water Use Efficiency ◽  
Water Use ◽  
N Fertilizer ◽  
Deep Placement ◽  
Prilled Urea ◽  
Planting Methods ◽  
Weed Infestation ◽  
Use Efficiency ◽  
Raised Bed ◽  
Boro Rice

Utilization of urea super granule (USG) with raised bed cultivation system for transplanted boro (winter, irrigated) rice production is a major concern now days. A field experiment was conducted in the chuadanga district of Bangladesh to compare the two cultivation methods: deep placement of USG on raised bed with boro rice, and prilled urea (PU) broadcasting in conventional planting. Results showed that USG in raised bed planting increased grain yields of transplanted boro rice by up to 18.18% over PU in conventional planting. Deep placement of USG in raised bed planting increased the number of panicle m-2, number of grains panicle-1 and 1000-grains weight of boro rice than the PU in conventional planting. Better plant growth was observed by deep placement of USG in raised bed planting compared to PU in conventional planting. Sterility percentage and weed infestation were lower on USG in raised bed planting compared to the PU in conventional planting methods. Forty seven percent irrigation water and application time could be saved by USG in raised bed planting than PU in conventional planting. Deep placement of USG in bed saved N fertilizer consumption over conventional planting. Water use efficiency for grain and biomass production was higher with deep placement of USG in bed planting than the PU broadcasting in conventional planting methods. Similarly, agronomic efficiency of N fertilizer by USG in bed planting was significantly higher than the PU broadcasting in conventional planting. This study concluded that deep placement of USG in raised bed planting for transplanted boro rice is a new approach to achieve fertilizer and water use efficiency as well as higher yield and less water input compared to existing agronomic practices in Bangladesh.

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