Whole genome sequence comparison of endemic multi-resistant Escherichia coli clones

2016 ◽  
Author(s):  
Tove Havnhøj Frandsen
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Sequence Comparison ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Genome Sequence Comparison

scholarly journals Whole genome sequence comparison of avian pathogenic Escherichia coli from acute and chronic salpingitis of egg laying hens

2020 ◽  
Vol 16 (1) ◽  
Author(s):  
Louise Ladefoged Poulsen ◽  
Egle Kudirkiene ◽  
Steffen Lynge Jørgensen ◽  
Steven Philip Djordjevic ◽  
Max Laurence Cummins ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Sequence Comparison ◽  
Laying Hens ◽  
Egg Laying ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Avian Pathogenic Escherichia Coli ◽  
Genome Sequence Comparison ◽  
Pathogenic Escherichia Coli

scholarly journals Whole genome sequence comparison of vtx2-converting phages from Enteroaggregative Haemorrhagic Escherichia coli strains

BMC Genomics ◽  
2014 ◽  
Vol 15 (1) ◽  
pp. 574 ◽  
Author(s):  
Laura Grande ◽  
Valeria Michelacci ◽  
Rosangela Tozzoli ◽  
Paola Ranieri ◽  
Antonella Maugliani ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Sequence Comparison ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Genome Sequence Comparison

scholarly journals Whole-genome sequence comparison as a method for improving bacterial species definition

2014 ◽  
Vol 60 (2) ◽  
pp. 75-78 ◽  
Author(s):  
Wen Zhang ◽  
Pengcheng Du ◽  
Han Zheng ◽  
Weiwen Yu ◽  
Li Wan ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Sequence Comparison ◽  
Bacterial Species ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Species Definition ◽  
Genome Sequence Comparison

scholarly journals Rapid High Resolution Genotyping of Francisella tularensis by Whole Genome Sequence Comparison of Annotated Genes (“MLST+”)

PLoS ONE ◽  
2015 ◽  
Vol 10 (4) ◽  
pp. e0123298 ◽  
Author(s):  
Markus H. Antwerpen ◽  
Karola Prior ◽  
Alexander Mellmann ◽  
Sebastian Höppner ◽  
Wolf D. Splettstoesser ◽  
...  
Keyword(s):  
High Resolution ◽  
Francisella Tularensis ◽  
Genome Sequence ◽  
Sequence Comparison ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Genome Sequence Comparison

scholarly journals Whole genome sequence comparison of ten diagnostic brucellaphages propagated on two Brucella abortus hosts

2015 ◽  
Vol 12 (1) ◽  
Author(s):  
Ekaterine Tevdoradze ◽  
Jason Farlow ◽  
Adam Kotorashvili ◽  
Natia Skhirtladze ◽  
Irina Antadze ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Brucella Abortus ◽  
Sequence Comparison ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Genome Sequence Comparison

scholarly journals Whole-Genome Sequence of Phage-Resistant Strain Escherichia coli DH5α

2018 ◽  
Vol 6 (10) ◽  
Author(s):  
Jingchao Chen ◽  
Yi Li ◽  
Kun Zhang ◽  
Hailei Wang
Keyword(s):  
Escherichia Coli ◽  
Comparative Analysis ◽  
Genome Sequence ◽  
Resistant Strain ◽  
Resistance Mechanism ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
E Coli ◽  
T4 Bacteriophage

ABSTRACT The genomes of many strains of Escherichia coli have been sequenced, as this organism is a classic model bacterium. Here, we report the genome sequence of Escherichia coli DH5α, which is resistant to a T4 bacteriophage (CCTCC AB 2015375), while its other homologous E. coli strains, such as E. coli BL21, DH10B, and MG1655, are not resistant to phage invasions. Thus, understanding of the genome of the DH5α strain, along with comparative analysis of its genome sequence along with other sequences of E. coli strains, may help to reveal the bacteriophage resistance mechanism of E. coli .

scholarly journals Whole genome sequence-enabled prediction of sequences performed for random PCR products of Escherichia coli

2000 ◽  
Vol 28 (9) ◽  
pp. 1879-1884 ◽  
Author(s):  
K. Nishigaki ◽  
A. Saito ◽  
H. Takashi ◽  
M. Naimuddin
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Pcr Products

scholarly journals Whole Genome Sequence Analysis of CTX-M-55 Producing Escherichia coli Isolates from Clinical Patients in Japan

2018 ◽  
Vol 3 (2) ◽  
Author(s):  
Yuya Hasunuma ◽  
Moe Yokemura ◽  
Nozomi Hiyoshi ◽  
Takashi Ishimatsu ◽  
Takuya Tsunoda ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Sequence Analysis ◽  
Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Genome Sequence Analysis

scholarly journals Complete Genome Sequence of the Escherichia coli Phage Ayreon

2018 ◽  
Vol 6 (2) ◽  
Author(s):  
Marnix Vlot ◽  
Franklin L. Nobrega ◽  
Che F. A. Wong ◽  
Yue Liu ◽  
Stan J. J. Brouns
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Temperate Phage ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Double Stranded Dna ◽  
Escherichia Coli Phage

ABSTRACT We report the whole-genome sequence of a new Escherichia coli temperate phage, Ayreon, comprising a linear double-stranded DNA (dsDNA) genome of 44,708 bp.

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