scholarly journals Allelic composition at GLU genes in a collection of spring wheat germplasm

2019 ◽  
Vol 48 (1) ◽  
pp. 25-31
Author(s):  
Munawar Shahzad ◽  
Sultan Habibullah Khan ◽  
Muhammad Sajjad ◽  
Aziz Ur-Rahman ◽  
Muhammad Nadeem ◽  
...  

For HMW-GS, a total of 16 different subunits and 30 allelic haplotypes were identified. The expression of HMW-GS ranged from 3 to 5 per genotype instead of 6 per genotype, revealing the phenomenon of gene silencing. The 2* was the most frequent subunit for Glu-A1 locus and was found in 52.45% lines. Eight subunits were identified for Glu-B1 locus. Five subunit pairs i.e. 6+8, 7+8, 7+9, 13+16 and 17+18 were present in the germplasm. Some single subunits i.e. 6, 7, 8 and 20 were also found. Subunit pair 17+18 was the most frequent with a partial frequency of 32.17%. For Glu-D1, four subunit pairs i.e. 2+12, 5+10, 2+11 and 5+11 were observed. The 5+10 was the most frequent subunit for Glu-D1 and was present in 65.03% lines. The 2+12 subunit pair was identified in 34.97% lines. For Glu3 loci 18 LMW subunits were identified. For Glu-A3, five subunits i.e. b, c, d, e and g were identified. Eight subunits i.e. b, c, d, f, g, h, i and j were identified for Glu-B3 locus. Four subunits i.e. a, b, c and l were identified for Glu-D3 locus.

2011 ◽  
Vol 37 (10) ◽  
pp. 1752-1762 ◽  
Author(s):  
Yong ZHANG ◽  
Shi-Zhao LI ◽  
Zhen-Lu WU ◽  
Wen-Xiong YANG ◽  
Ya-Xiong YU ◽  
...  

Crop Science ◽  
1993 ◽  
Vol 33 (6) ◽  
pp. 1420-1420 ◽  
Author(s):  
S. P. Lanning ◽  
L. E. Talbert ◽  
G. D. Johnson

Crop Science ◽  
2005 ◽  
Vol 45 (1) ◽  
pp. cropsci2005.0430 ◽  
Author(s):  
M. Mergoum ◽  
R.C. Frohberg ◽  
J.D. Miller ◽  
J.B. Rasmussen ◽  
R.W. Stack

2011 ◽  
Vol 123 (8) ◽  
pp. 1257-1268 ◽  
Author(s):  
Long-Xi Yu ◽  
Aaron Lorenz ◽  
Jessica Rutkoski ◽  
Ravi P. Singh ◽  
Sridhar Bhavani ◽  
...  

2006 ◽  
Vol 112 (7) ◽  
pp. 1239-1247 ◽  
Author(s):  
Yong-Bi Fu ◽  
Gregory W. Peterson ◽  
Ju-Kyung Yu ◽  
Lifeng Gao ◽  
Jizeng Jia ◽  
...  

2011 ◽  
Vol 131 (2) ◽  
pp. 244-251 ◽  
Author(s):  
Golam Rasul ◽  
Gavin D. Humphreys ◽  
Jixiang Wu ◽  
Anita Brûlé-Babel ◽  
Bourlaye Fofana ◽  
...  

2018 ◽  
Vol 108 (2) ◽  
pp. 234-245 ◽  
Author(s):  
Jayfred Gaham Godoy ◽  
Sheri Rynearson ◽  
Xianming Chen ◽  
Michael Pumphrey

Stripe rust, caused by Puccinia striiformis f. sp. tritici, is a major yield-limiting foliar disease of wheat (Triticum aestivum) worldwide. In this study, the genetic variability of elite spring wheat germplasm from North America was investigated to characterize the genetic basis of effective all-stage and adult plant resistance (APR) to stripe rust. A genome-wide association study was conducted using 237 elite spring wheat lines genotyped with an Illumina Infinium 90K single-nucleotide polymorphism array. All-stage resistance was evaluated at seedling stage in controlled conditions and field evaluations were conducted under natural disease pressure in eight environments across Washington State. High heritability estimates and correlations between infection type and severity were observed. Ten loci for race-specific all-stage resistance were confirmed from previous mapping studies. Three potentially new loci associated with race-specific all-stage resistance were identified on chromosomes 1D, 2A, and 5A. For APR, 11 highly significant quantitative trait loci (QTL) (false discovery rate < 0.01) were identified, of which 3 QTL on chromosomes 3A, 5D, and 7A are reported for the first time. The QTL identified in this study can be used to enrich the current gene pool and improve the diversity of resistance to stripe rust disease.


2013 ◽  
Vol 64 (1) ◽  
pp. 1 ◽  
Author(s):  
Shi-Sheng Chen ◽  
Guo-Yue Chen ◽  
Cheng Yang ◽  
Yu-Ming Wei ◽  
Wen-Xiong Wu ◽  
...  

Pathogens are a reason for low yield in common wheat (Triticum aestivum L.). Stripe rust (or yellow rust), caused by the fungus Puccinia striiformis f. sp. tritici (Pst), is one of the most important foliar diseases of wheat. One of the most cost-effective and environmentally sound ways to control stripe rust is to use plant varieties that are resistant to this pathogen. It is an important task for wheat breeders and pathologists to identify new genes and pyramid them in order to achieve high-level, durable resistance to stripe rust. One spring wheat germplasm, HRMSN-81, with resistance to the most dominant races in China, is identified from the CIMMYT breeding lines. To elucidate the genetic basis of its resistance, HRMSN-81 was crossed with susceptible wheat genotype Taichung 29. Seedlings of the parents were tested with Chinese Pst isolates CYR31, CYR32, and CYR33 under controlled greenhouse conditions, and adult plants of the parents and F1, F2, and F2:3 progeny were inoculated with the epidemic stripe rust mixed races, including CYR31, CYR32, and CYR33, in fields under natural infection. Genetic analysis showed that HRMSN-81 has a single dominant gene conferring all-stage resistance, temporarily designated as YrHRMSN-81. Resistance gene analogue polymorphism (RGAP), simple sequence repeat (SSR), target region amplified polymorphism (TRAP), and sequence-related amplified polymorphism (SRAP) techniques in combination with bulked segregant analysis (BSA) were used to identify molecular markers linked to the resistance gene. A linkage map consisting of six RGAP, two SSR, one TRAP, and two SRAP markers was constructed for YrHRMSN-81 using 148 F2 plants. The gene was mapped to chromosome arm 2DS by testing the complete set of nulli-tetrasomic lines and selected ditelosomic lines with two RGAP markers and was further confirmed by two chromosome-specific SSR markers. The results of gene characteristics and chromosome locations indicated that YrHRMSN-81 was probably a new stripe rust resistance gene. The two flanking markers Xwgp-180bp (93% polymorphism rate) and Xwmc453 (91% polymorphism rate) detected 100% polymorphism of the 56 tested wheat genotypes when they were used in combination. The identification of the gene YrHRMSN-81 and the determination of the flanking markers should be useful for rapidly transferring it in wheat breeding programs.


Crop Science ◽  
2005 ◽  
Vol 45 (1) ◽  
pp. cropsci2005.0428
Author(s):  
E.J. Souza ◽  
B.J. Goates ◽  
G. Fuentes-Davila ◽  
J.A. Udall
Keyword(s):  

Crop Science ◽  
2005 ◽  
Vol 45 (4) ◽  
pp. 1665-1666 ◽  
Author(s):  
F.R. Clarke ◽  
R.M. DePauw ◽  
T. Aung
Keyword(s):  

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