scholarly journals Combined Low-/High-Density Modern and Ancient Genome-Wide Data Document Genomic Admixture History of High-Altitude East Asians

2021 ◽  
Vol 12 ◽  
Author(s):  
Yan Liu ◽  
Mengge Wang ◽  
Pengyu Chen ◽  
Zheng Wang ◽  
Jing Liu ◽  
...  
Keyword(s):  
Tibetan Plateau ◽  
High Altitude ◽  
Yellow River ◽  
High Density ◽  
National Database ◽  
The Tibetan Plateau ◽  
Low Density ◽  
Late Neolithic ◽  
Admixture Proportion ◽  
East Asians

The Tibetan Plateau (TP) is considered to be one of the last terrestrial environments conquered by the anatomically modern human. Understanding of the genetic background of highland Tibetans plays a pivotal role in archeology, anthropology, genetics, and forensic investigations. Here, we genotyped 22 forensic genetic markers in 1,089 Tibetans residing in Nagqu Prefecture and collected 1,233,013 single nucleotide polymorphisms (SNPs) in the highland East Asians (Sherpa and Tibetan) from the Simons Genome Diversity Project and ancient Tibetans from Nepal and Neolithic farmers from northeastern Qinghai-Tibetan Plateau from public databases. We subsequently merged our two datasets with other worldwide reference populations or eastern ancient Eurasians to gain new insights into the genetic diversity, population movements, and admixtures of high-altitude East Asians via comprehensive population genetic statistical tools [principal component analysis (PCA), multidimensional scaling plot (MDS), STRUCTURE/ADMIXTURE, f3, f4, qpWave/qpAdm, and qpGraph]. Besides, we also explored their forensic characteristics and extended the Chinese National Database based on STR data. We identified 231 alleles with the corresponding allele frequencies spanning from 0.0005 to 0.5624 in the forensic low-density dataset, in which the combined powers of discrimination and the probability of exclusion were 1–1.22E-24 and 0.999999998, respectively. Additionally, comprehensive population comparisons in our low-density data among 57 worldwide populations via the Nei’s genetic distance, PCA, MDS, NJ tree, and STRUCTURE analysis indicated that the highland Tibeto-Burman speakers kept the close genetic relationship with ethnically close populations. Findings from the 1240K high-density dataset not only confirmed the close genetic connection between modern Highlanders, Nepal ancients (Samdzong, Mebrak, and Chokhopani), and the upper Yellow River Qijia people, suggesting the northeastern edge of the TP served as a geographical corridor for ancient population migrations and interactions between highland and lowland regions, but also evidenced that late Neolithic farmers permanently colonized into the TP by adopting cold-tolerant barley agriculture that was mediated via the acculturation of idea via the millet farmer and not via the movement of barley agriculturalist as no obvious western Eurasian admixture signals were identified in our analyzed modern and ancient populations. Besides, results from the qpAdm-based admixture proportion estimation and qpGraph-based phylogenetic relationship reconstruction consistently demonstrated that all ancient and modern highland East Asians harbored and shared the deeply diverged Onge/Hoabinhian-related eastern Eurasian lineage, suggesting a common Paleolithic genetic legacy existed in high-altitude East Asians as the first layer of their gene pool.

scholarly journals Extension of the Upper Yellow River into the Tibet Plateau: Review and New Data

Quaternary ◽  
2021 ◽  
Vol 4 (2) ◽  
pp. 14
Author(s):  
Zhengchen Li ◽  
Xianyan Wang ◽  
Jef Vandenberghe ◽  
Huayu Lu
Keyword(s):  
Tibetan Plateau ◽  
Yellow River ◽  
Google Earth ◽  
Tibet Plateau ◽  
The Yellow River ◽  
Published Data ◽  
The Tibetan Plateau ◽  
Large Lakes ◽  
River Terraces ◽  
The Tibet Plateau

The Wufo Basin at the margin of the northeastern Tibet Plateau connects the upstream reaches of the Yellow River with the lowland catchment downstream, and the fluvial terrace sequence in this basin provides crucial clues to understand the evolution history of the Yellow River drainage system in relation to the uplift and outgrowth of the Tibetan Plateau. Using field survey and analysis of Digital Elevation Model/Google Earth imagery, we found at least eight Yellow River terraces in this area. The overlying loess of the highest terrace was dated at 1.2 Ma based on paleomagnetic stratigraphy (two normal and two reversal polarities) and the loess-paleosol sequence (12 loess-paleosol cycles). This terrace shows the connections of drainage parts in and outside the Tibetan Plateau through its NE margin. In addition, we review the previously published data on the Yellow River terraces and ancient large lakes in the basins. Based on our new data and previous researches, we conclude that the modern Yellow River, with headwaters in the Tibet Plateau and debouching in the Bohai Sea, should date from at least 1.2 Ma. Ancient large lakes (such as the Hetao and Sanmen Lakes) developed as exorheic systems and flowed through the modern Yellow River at that time.

scholarly journals Condensing Life Substances within the House: The Rice-Boiling Shuhi of Southwest China

2017 ◽  
Vol 71 (1) ◽  
Author(s):  
Elisabeth Hsu ◽  
Franz K. Huber ◽  
Caroline S. Weckerle
Keyword(s):  
Tibetan Plateau ◽  
Southeast Asia ◽  
High Altitude ◽  
Sea Level ◽  
Ethnic Groups ◽  
Southwest China ◽  
Cultural Practice ◽  
The Tibetan Plateau ◽  
Regional Culture ◽  
Fault Line

AbstractThe Shuhi of Muli County, Sichuan Province, are one of multiple ethnic groups inhabiting the river gorges of the Qinghai-Gansu-Sichuan corridor between the Tibetan plateau and the Chinese lowlands. The Shuhi have grown paddy rice since times immemorial at an unusually high altitude (ca. 2,300 m above sea level). This article aims to explain this conundrum not merely through the ecology (as is common among Tibetan area specialists), but by researching the cultivation and consumption of rice as a historically-evolved cultural practice. According to a recently formulated agro-archaeological hypothesis regarding the macro-region of Eurasia, it is possible to identify two supra-regional culture complexes distinguished by their respective culinary technologies: rice-boiling versus wheat-grinding-and-baking. The hypothesis posits that the fault line between the two supra-regional cultural complexes is precisely along this river gorges corridor. In this article we provide support for this hypothesis arguing that Shuhi ritual and kinship practices have much affinity with those of other rice-boiling peoples in Southeast Asia, whereas certain of their current religious practices are shared with the wheat-grinding Tibetans.

scholarly journals Evaluating the streamflow simulation capability of PERSIANN-CDR daily rainfall products in two river basins on the Tibetan Plateau

2016 ◽  
Author(s):  
Xiaomang Liu ◽  
Tiantian Yang ◽  
Koulin Hsu ◽  
Changming Liu ◽  
Soroosh Sorooshian
Keyword(s):  
Tibetan Plateau ◽  
River Basin ◽  
Yangtze River ◽  
Yellow River ◽  
Yangtze River Basin ◽  
Information Source ◽  
Hydrologic Model ◽  
The Tibetan Plateau ◽  
Climate Data ◽  
Streamflow Simulation

Abstract. On the Tibetan Plateau, the limited ground-based rainfall information owing to a harsh environment has brought great challenges to hydrological studies. Satellite-based rainfall products, which allow a better coverage than both radar network and rain gauges on the Tibetan Plateau, can be suitable observation alternatives for investigating the hydrological processes and climate change. In this study, a newly developed daily satellite-based precipitation product, termed Precipitation Estimation from Remotely Sensed Information Using Artificial Neural Networks–Climate Data Record (PERSIANN-CDR), is used as input of a hydrologic model to simulate streamflow in the upper Yellow and Yangtze River Basin on the Tibetan Plateau. The results show that the simulated streamflow using PERSIANN-CDR precipitation is closer to observation than that using limited gauge-based precipitation interpolation in the upper Yangtze River Basin. The simulated streamflow using gauge-based precipitation are higher than the streamflow observation during the wet season. In the upper Yellow River Basin, PERSIANN-CDR precipitation and gauge-based precipitation have similar good performance in simulating streamflow. The evaluation of streamflow simulation capability in this study partly indicates that PERSIANN-CDR rainfall product has good potentials to be a reliable dataset and an alternative information source besides the sparse gauge network for conducting long term hydrological and climate studies on the Tibetan Plateau.

scholarly journals Early evidence for the use of wheat and barley as staple crops on the margins of the Tibetan Plateau

2015 ◽  
Vol 112 (18) ◽  
pp. 5625-5630 ◽  
Author(s):  
Jade A. d’Alpoim Guedes ◽  
Hongliang Lu ◽  
Anke M. Hein ◽  
Amanda H. Schmidt
Keyword(s):  
Tibetan Plateau ◽  
East Asia ◽  
High Altitude ◽  
Niche Modeling ◽  
Western China ◽  
The Tibetan Plateau ◽  
Thermal Niche ◽  
Early Evidence ◽  
Early Use ◽  
Staple Crops

We report directly dated evidence from circa 1400 calibrated years (cal) B.C. for the early use of wheat, barley, and flax as staple crops on the borders of the Tibetan Plateau. During recent years, an increasing amount of data from the Tibetan Plateau and its margins shows that a transition from millets to wheat and barley agriculture took place during the second millennium B.C. Using thermal niche modeling, we refute previous assertions that the ecological characteristics of wheat and barley delayed their spread into East Asia. Rather, we demonstrate that the ability of these crops to tolerate frost and their low growing degree-day requirements facilitated their spread into the high-altitude margins of western China. Following their introduction to this region, these crops rapidly replaced Chinese millets and became the staple crops that still characterize agriculture in this area today.

scholarly journals Ancient mitogenomes show plateau populations from last 5200 years partially contributed to present-day Tibetans

2020 ◽  
Vol 287 (1923) ◽  
pp. 20192968 ◽  
Author(s):  
Manyu Ding ◽  
Tianyi Wang ◽  
Albert Min-Shan Ko ◽  
Honghai Chen ◽  
Hui Wang ◽  
...  
Keyword(s):  
Mitochondrial Dna ◽  
Deep Learning ◽  
Tibetan Plateau ◽  
High Altitude ◽  
Simulation Models ◽  
The Tibetan Plateau ◽  
Limited Evidence ◽  
Complete Continuity ◽  
Genetic Origins ◽  
Low Altitude

The clarification of the genetic origins of present-day Tibetans requires an understanding of their past relationships with the ancient populations of the Tibetan Plateau. Here we successfully sequenced 67 complete mitochondrial DNA genomes of 5200 to 300-year-old humans from the plateau. Apart from identifying two ancient plateau lineages (haplogroups D4j1b and M9a1a1c1b1a) that suggest some ancestors of Tibetans came from low-altitude areas 4750 to 2775 years ago and that some were involved in an expansion of people moving between high-altitude areas 2125 to 1100 years ago, we found limited evidence of recent matrilineal continuity on the plateau. Furthermore, deep learning of the ancient data incorporated into simulation models with an accuracy of 97% supports that present-day Tibetan matrilineal ancestry received partial contribution rather than complete continuity from the plateau populations of the last 5200 years.

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