scholarly journals Can Combined Electrostatic and Polarization Effects Alone Explain the F···F Negative-Negative Bonding in Simple Fluoro-Substituted Benzene Derivatives? A First-Principles Perspective

Computation ◽  
2018 ◽  
Vol 6 (4) ◽  
pp. 51 ◽  
Author(s):  
Pradeep Varadwaj ◽  
Arpita Varadwaj ◽  
Helder Marques ◽  
Koichi Yamashita

The divergence of fluorine-based systems and significance of their nascent non-covalent chemistry in molecular assemblies are presented in a brief review of the field. Emphasis has been placed to show that type-I and -II halogen-centered F···F long-ranged intermolecular distances viable between the entirely negative fluorine atoms in some fluoro-substituted dimers of C6H6 can be regarded as the consequence of significant non-covalent attractive interactions. Such attractive interactions observed in the solid-state structures of C6F6 and other similar fluorine-substituted aromatic compounds have frequently been underappreciated. While these are often ascribed to crystal packing effects, we show using first-principles level calculations that these are much more fundamental in nature. The stability and reliability of these interactions are supported by their negative binding energies that emerge from a supermolecular procedure using MP2 (second-order Møller-Plesset perturbation theory), and from the Symmetry Adapted Perturbation Theory, in which the latter does not determine the interaction energy by computing the total energy of the monomers or dimer. Quantum Theory of Atoms in Molecules and Reduced Density Gradient Non-Covalent Index charge-density-based approaches confirm the F···F contacts are a consequence of attraction by their unified bond path (and bond critical point) and isosurface charge density topologies, respectively. These interactions can be explained neither by the so-called molecular electrostatic surface potential (MESP) model approach that often demonstrates attraction between sites of opposite electrostatic surface potential by means of Coulomb’s law of electrostatics, nor purely by the effect of electrostatic polarization. We provide evidence against the standalone use of this approach and the overlooking of other approaches, as the former does not allow for the calculation of the electrostatic potential on the surfaces of the overlapping atoms on the monomers as in the equilibrium geometry of a complex. This study thus provides unequivocal evidence of the limitation of the MESP approach for its use in gaining insight into the nature of reactivity of overlapped interacting atoms and the intermolecular interactions involved.


2013 ◽  
Vol 1515 ◽  
Author(s):  
Motohiro Yuasa ◽  
Yasumasa Chino ◽  
Mamoru Mabuchi

ABSTRACTGrain boundary (GB) sliding is an important deformation mode in polycrystals, and it has been extensively investigated, for example, there are many studies on influences of the atomic geometry in the GB region. However, it is important to investigate GB sliding from the electronic structure of GB for deeper understandings of the sliding mechanisms. In the present work, we investigated the GBs sliding in pure and segregated bicrystals with classical molecular dynamics (MD) simulations and first-principles calculations. It is accepted that the sliding rate is affected by the GB energy. However, there was no correlation between the sliding rate and the GB energy in either the pure or the segregated bicrystals. First-principles calculations revealed that the sliding rate calculated by the MD simulations increases with decreasing minimum charge density at the bond critical point in the GB. This held in both the pure and segregated bicrystals. It seems that the sliding rate depends on atomic movement at the minimum charge density sites.



2020 ◽  
Vol 2 (1) ◽  
Author(s):  
Christina A. C. Garcia ◽  
Jennifer Coulter ◽  
Prineha Narang


1993 ◽  
Vol 319 ◽  
Author(s):  
N. Kioussis ◽  
H. Watanabe ◽  
R.G. Hemker ◽  
W. Gourdin ◽  
A. Gonis ◽  
...  

AbstractUsing first-principles electronic structure calculations based on the Linear-Muffin-Tin Orbital (LMTO) method, we have investigated the effects of interstitial boron and hydrogen on the electronic structure of the L12 ordered intermetallic Ni3A1. When it occupies an octahedral interstitial site entirely coordinated by six Ni atoms, we find that boron enhances the charge distribution found in the strongly-bound “pure” Ni3AI crystal: Charge is depleted at Ni and Al sites and enhanced in interstitial region. Substitution of Al atoms for two of the Ni atoms coordinating the boron, however, reduces the interstitial charge density between certain atomic planes. In contrast to boron, hydrogen appears to deplete the interstitial charge, even when fully coordinated by Ni atoms. We suggest that these results are broadly consistent with the notion of boron as a cohesion enhancer and hydrogen as an embrittler.



1991 ◽  
Vol 238 ◽  
Author(s):  
Genrich L. Krasko

ABSTRACTImpurities, such as H, P, S, B, etc, have a very low solubility in iron, and therefore prefer to segregate at the grain boundaries (GBs). In order to analyze the energetics of the impurities on the iron GB, the LMTO calculations were performed on a simple 8-atom supercel 1 emulating a typical (capped trigonal prism) GB environment. The so-called “environment-sensitive embedding energies” were calculated for H, B, C, N, O, Al, Si, P, and S, as a function of the electron charge density due to the host atoms at the impurity site. It was shown that, at the electron charge density typical of a GB, B and C have the lowest energy among the analyzed impurities, and thus would compete with them for the site on the GB, tending to push the other impurities off the GB. The above energies were then used in a modified Finnis-Sinclair embedded atom approach for calculating the equilibrium interplanar distances in the vicinity of a (111) σ3 tilt GB plane, both for the clean GB and that with an impurity. These distances were found to be oscillating, returning to the equilibrium spacing between (111) planes in bulk BCC iron by the 10th-12th plane off the GB plane. H, B, C, N and O actually dampen the deformation wave (making the oscillation amplitudes less than in the clean GB), while, Al, Si, P and S result in an increase of the oscillations. The effect of B, C, N and O may be interpreted as cohesion enhancement; this conclusion supports our earlier first-principles results [1] on B and C.



Author(s):  
Yiheng Chen ◽  
Wen-Ti Guo ◽  
Zi-si Chen ◽  
Suyun Wang ◽  
Jian-Min Zhang

Abstract In recent years, the discovery of "magic angle" graphene has given new inspiration to the formation of heterojunctions. Similarly, the use of hexagonal boron nitride, known as white graphene, as a substrate for graphene devices has more aroused great interest in the graphene/hexagonal boron nitride (G/hBN) heterostructure system. Based on the first principles method of density functional theory, the band structure, density of states, Mulliken population, and differential charge density of a tightly packed model of twisted graphene/hexagonal boron nitride/graphene (G/hBN/G) sandwich structure have been studied. Through the establishment of heterostructure models TBG inserting hBN with different twisted angles, it was found that the band gap, Mulliken population, and charge density, exhibited specific evolution regulars with the rotation angle of the upper graphene, showing novel electronic properties and realizing metal-insulator phase transition. We find that the particular value of the twist angle at which the metal-insulator phase transition occurs and propose a rotational regulation mechanism with angular periodicity. Our results have guiding significance for the practical application of heterojunction electronic devices.



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