scholarly journals On the Possible Coordination on a 3MC State Itself? Mechanistic Investigation Using DFT-Based Methods

Inorganics ◽  
2020 ◽  
Vol 8 (2) ◽  
pp. 15 ◽  
Author(s):  
Adrien Soupart ◽  
Fabienne Alary ◽  
Jean-Louis Heully ◽  
Isabelle M. Dixon

Understanding light-induced ligand exchange processes is key to the design of efficient light-releasing prodrugs or photochemically driven functional molecules. Previous mechanistic investigations had highlighted the pivotal role of metal-centered (MC) excited states in the initial ligand loss step. The question remains whether they are equally important in the subsequent ligand capture step. This article reports the mechanistic study of direct acetonitrile coordination onto a 3MC state of [Ru(bpy)3]2+, leading to [Ru(bpy)2(κ1-bpy)(NCMe)]2+ in a 3MLCT (metal-to-ligand charge transfer) state. Coordination of MeCN is indeed accompanied by the decoordination of one pyridine ring of a bpy ligand. As estimated from Nudged Elastic Band calculations, the energy barrier along the minimum energy path is 20 kcal/mol. Interestingly, the orbital analysis conducted along the reaction path has shown that creation of the metallic vacancy can be achieved by reverting the energetic ordering of key dσ* and bpy-based π* orbitals, resulting in the change of electronic configuration from 3MC to 3MLCT. The approach of the NCMe lone pair contributes to destabilizing the dσ* orbital by electrostatic repulsion.

2021 ◽  
Author(s):  
John Pham ◽  
Cole Jarczyk ◽  
Eamon Reynolds ◽  
Sophie Kelly ◽  
Thao Kim ◽  
...  

<p>We previously demonstrated that Milstein’s seminal diethylamino-substituted PNN-pincer-ruthenium catalyst for ester hydrogenation is activated by dehydroalkylation of the pincer ligand, releasing ethane and eventually forming an NHEt-substituted derivative that we proposed is the active catalyst. In this paper, we present a computational and experimental mechanistic study supporting this hypothesis. Our DFT analysis shows that the minimum-energy pathways for hydrogen activation, ester hydrogenolysis, and aldehyde hydrogenation rely on the key involvement of the nascent N-H group. We have isolated and crystallographically characterized two catalytic intermediates, a ruthenium dihydride and a ruthenium hydridoalkoxide, the latter of which is the catalyst resting state. A detailed kinetic study shows that catalytic ester hydrogenation is first-order in ruthenium and hydrogen, shows saturation behavior in ester, and is inhibited by the product alcohol. A global fit of the kinetic data to a simplified model incorporating the hydridoalkoxide and dihydride intermediates and three kinetically relevant transition states showed excellent agreement with the results from DFT. <b></b></p><br>


2021 ◽  
Author(s):  
John Pham ◽  
Cole Jarczyk ◽  
Eamon Reynolds ◽  
Sophie Kelly ◽  
Thao Kim ◽  
...  

<p>We previously demonstrated that Milstein’s seminal diethylamino-substituted PNN-pincer-ruthenium catalyst for ester hydrogenation is activated by dehydroalkylation of the pincer ligand, releasing ethane and eventually forming an NHEt-substituted derivative that we proposed is the active catalyst. In this paper, we present a computational and experimental mechanistic study supporting this hypothesis. Our DFT analysis shows that the minimum-energy pathways for hydrogen activation, ester hydrogenolysis, and aldehyde hydrogenation rely on the key involvement of the nascent N-H group. We have isolated and crystallographically characterized two catalytic intermediates, a ruthenium dihydride and a ruthenium hydridoalkoxide, the latter of which is the catalyst resting state. A detailed kinetic study shows that catalytic ester hydrogenation is first-order in ruthenium and hydrogen, shows saturation behavior in ester, and is inhibited by the product alcohol. A global fit of the kinetic data to a simplified model incorporating the hydridoalkoxide and dihydride intermediates and three kinetically relevant transition states showed excellent agreement with the results from DFT. <b></b></p><br>


1992 ◽  
Vol 70 (9) ◽  
pp. 2375-2380 ◽  
Author(s):  
Ted Schaefer ◽  
Lina B.-L. Lee ◽  
Rudy Sebastian

The 1H nuclear magnetic resonance spectral parameters are reported for 4.0 mol% solutions of 2-(4-chlorophenylthio) benzaldehyde in CS2/C6D12 and acetone-d6 at 300 K. In CS2 the O-syn conformer is 36% abundant, rising to 50% in acetone-d6. These abundances are compared to those of the O-syn and O-trans conformers of 2-(alkylthio) benzaldehydes in CCl4, solution. On the basis of coupling constants and chemical shifts it is concluded that the skew conformer of the title compound is very likely the one of minimum energy in both solutions. In the skew conformer the plane of the 4-chlorophenyl group lies perpendicular to the CSC plane and also to that of the other aromatic moiety. It is suggested that the [Formula: see text] interaction is rather weak and that the population of the O-syn conformer is controlled by the orientation of the mainly 3p lone-pair orbital on sulfur. At best, the [Formula: see text] interaction is attractive only when the 3p orbital lies perpendicular to the plane of the formyl group. The skew conformation of the title compound is contrasted to the skew conformation of 2-hydroxyphenyl phenyl sulfide in which, however, the role of the two aromatic planes is reversed; the 3p orbital now lies in or near the plane of the phenyl group COH due to an attractive [Formula: see text] interaction.


2021 ◽  
Author(s):  
John Pham ◽  
Cole Jarczyk ◽  
Eamon Reynolds ◽  
Sophie Kelly ◽  
Thao Kim ◽  
...  

<p>We previously demonstrated that Milstein’s seminal diethylamino-substituted PNN-pincer-ruthenium catalyst for ester hydrogenation is activated by dehydroalkylation of the pincer ligand, releasing ethane and eventually forming an NHEt-substituted derivative that we proposed is the active catalyst. In this paper, we present a computational and experimental mechanistic study supporting this hypothesis. Our DFT analysis shows that the minimum-energy pathways for hydrogen activation, ester hydrogenolysis, and aldehyde hydrogenation rely on the key involvement of the nascent N-H group. We have isolated and crystallographically characterized two catalytic intermediates, a ruthenium dihydride and a ruthenium hydridoalkoxide, the latter of which is the catalyst resting state. A detailed kinetic study shows that catalytic ester hydrogenation is first-order in ruthenium and hydrogen, shows saturation behavior in ester, and is inhibited by the product alcohol. A global fit of the kinetic data to a simplified model incorporating the hydridoalkoxide and dihydride intermediates and three kinetically relevant transition states showed excellent agreement with the results from DFT. <b></b></p><br>


Molecules ◽  
2018 ◽  
Vol 23 (11) ◽  
pp. 2830 ◽  
Author(s):  
Erik Vázquez-Montelongo ◽  
José Vázquez-Cervantes ◽  
G. Cisneros

N-t e r t-butoxycarbonylation of amines in solution (water, organic solvents, or ionic liquids) is a common reaction for the preparation of drug molecules. To understand the reaction mechanism and the role of the solvent, quantum mechanical/molecular mechanical simulations using a polarizable multipolar force field with long–range electrostatic corrections were used to optimize the minimum energy paths (MEPs) associated with various possible reaction mechanisms employing the nudged elastic band (NEB) and the quadratic string method (QSM). The calculated reaction energies and energy barriers were compared with the corresponding gas-phase and dichloromethane results. Complementary Electron Localization Function (ELF)/NCI analyses provide insights on the critical structures along the MEP. The calculated results suggest the most likely path involves a sequential mechanism with the rate–limiting step corresponding to the nucleophilic attack of the aniline, followed by proton transfer and the release of CO 2 without the direct involvement of imidazolium cations as catalysts.


Crystals ◽  
2021 ◽  
Vol 11 (6) ◽  
pp. 667
Author(s):  
Yanxia Lu ◽  
Qing Peng ◽  
Chenguang Liu

The α-decay of incorporated actinides continuously produces helium, resulting in helium accumulation and causing security concerns for nuclear waste forms. The helium mobility is a key issue affecting the accumulation and kinetics of helium. The energy barriers and migration pathways of helium in a potential high-level nuclear waste forms, La2Zr2O7 pyrochlore, have been investigated in this work using the climbing image nudged elastic band method with density functional theory. The minimum energy pathway for helium to migrate in La2Zr2O7 is identified as via La–La interstitial sites with a barrier of 0.46 eV. This work may offer a theoretical foundation for further prospective studies of nuclear waste forms.


2012 ◽  
Vol 249 (10) ◽  
pp. 1902-1906 ◽  
Author(s):  
Alexander V. Kolobov ◽  
Paul Fons ◽  
Junji Tominaga

PLoS ONE ◽  
2012 ◽  
Vol 7 (3) ◽  
pp. e32659 ◽  
Author(s):  
Beatriz Trenor ◽  
Karen Cardona ◽  
Juan F. Gomez ◽  
Sridharan Rajamani ◽  
Jose M. Ferrero ◽  
...  

2004 ◽  
Vol 77 (5) ◽  
pp. 891-913 ◽  
Author(s):  
Pankaj Y. Patil ◽  
William J. van Ooij

Abstract Adhesion between rubber and brass-coated steel cords is enhanced by using resins as adhesion promoters. Experiments were carried out using a squalene liquid rubber modeling approach to study the effect of resins on the chemistry of the vulcanization reaction. The formation of new intermediates during vulcanization and changes in chemical concentrations with reaction time was studied using Gel Permeation Chromatography (GPC) analysis of the reacted squalene mixtures. Also, the effect of presence of resins on the surface of sulfidized brass cords was studied by analyzing the adhesion layer's elemental composition using the Electron Dispersive X-ray Spectroscopy (EDX) and Secondary Ion Mass Spectrometry (SIMS) characterization techniques. The changes in surface morphology of the adhesion layer with reaction time was noted by taking micrographs using the Scanning Electron Microscopy (SEM) technique. In this paper, a new mechanism is proposed for the role of resins in the improvement of initial and aged adhesion performance between rubber and brass-coated steel tire cords.


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