<p><em>Atocion lithuanicum</em> (Zapał.) Tzvel. (basionym <em>Silene</em><em> </em><em>lithuanica</em> Zapał.) is an endemic species of the Polesie, related and morphologically similar to <em>A. armeria </em>(L.) Raf.<em>, </em>which naturally occurs in Central and Southern Europe, but is widely cultivated. In Ukraine <em>A. lithuanicum</em> is considered as separate species and included in different issues of nature conservation, but in Europe it is listed as synonym or variety of <em>A. armeria</em>. Thus, the purpose of our investigation was to examine micromorphological features of these taxa to distinguish them. Pollen grains, seeds and leaf surfaces of both <em>Atocion</em><em> </em><em>lithuanicum</em> and <em>A. armeria</em> (L.) Raf. were investigated by scanning electron microscopy.</p> <p>Palynological distinctions between these taxa are associated with the ultrastructure of pollen grains, such as margin of a pollen (smooth or undulate), diameter of pores (3,04-5,22 (3,96±0,57) or 2,62-4,15 (3,47±0,32) µm), microechinate number on the pore (11-20 (25) or 7-14), exine ornamentation (acute, broadly conical spinule or obtuse spinule) and perforation diameter (0,1 or 0,2-0,3 µm).</p> <p>Seed characteristics such as dimensions (350-570 х 450-630 (468,78±49,2 х 544,84±51,39) in <em>A. lithuanicum</em> or 480-670 х 600-800 (595,67±48,04 х 706,67± 50,26) µm in <em>A. armeria</em>), shape (reniform-circular or reniform-triangular and reniform-circular), dimensions of exotesta cells in distal row (69-160 х 13-28,6 (116,52±21,9 х 20,72±3,99) or 95,6-202,7 х 7,8-40,5 (143,31±27,3 х 28,76±5,05) µm), the number of anticlinal wall teeth (15-24 or 19-29), papilla presence on periclinal wall of lateral and dorsal surfaces (common absent or scarce weakly expressed in <em>A. lithuanicum</em> or usually strongly expressed in <em>A. armeria</em>) also differ these taxa.</p> <p>Epicuticular wax projections are of different size and shape even on the same lamina, so no significant differences in the leaf surface microcharacteristics were observed.</p> <p>Thereby, new micromorphological distinctions associated with the ultrastructure of pollen grains and the seeds were demonstrated, which allows to distinguish these taxa.</p> <p><em>Key words: </em><em>Atocion</em><em> </em><em>lithuanicum</em><em>, </em><em>A. armeria, </em><em>S</em><em>ЕМ, </em><em>pollen, seed, lamina</em></p>