scholarly journals The relative importance of phytoplankton aggregates and zooplankton fecal pellets to carbon export: insights from free-drifting sediment trap deployments in naturally iron-fertilised waters near the Kerguelen Plateau

2015 ◽  
Vol 12 (4) ◽  
pp. 1007-1027 ◽  
Author(s):  
E. C. Laurenceau-Cornec ◽  
T. W. Trull ◽  
D. M. Davies ◽  
S. G. Bray ◽  
J. Doran ◽  
...  

Abstract. The first KErguelen Ocean and Plateau compared Study (KEOPS1), conducted in the naturally iron-fertilised Kerguelen bloom, demonstrated that fecal material was the main pathway for exporting carbon to the deep ocean during summer (January–February 2005), suggesting a limited role of direct export via phytodetrital aggregates. The KEOPS2 project reinvestigated this issue during the spring bloom initiation (October–November 2011), when zooplankton communities may exert limited grazing pressure, and further explored the link between carbon flux, export efficiency and dominant sinking particles depending upon surface plankton community structure. Sinking particles were collected in polyacrylamide gel-filled and standard free-drifting sediment traps (PPS3/3), deployed at six stations between 100 and 400 m, to examine flux composition, particle origin and their size distributions. Results revealed an important contribution of phytodetrital aggregates (49 ± 10 and 45 ± 22% of the total number and volume of particles respectively, all stations and depths averaged). This high contribution dropped when converted to carbon content (30 ± 16% of total carbon, all stations and depths averaged), with cylindrical fecal pellets then representing the dominant fraction (56 ± 19%). At 100 and 200 m depth, iron- and biomass-enriched sites exhibited the highest carbon fluxes (maxima of 180 and 84 ± 27 mg C m-2 d-1, based on gel and PPS3/3 trap collection respectively), especially where large fecal pellets dominated over phytodetrital aggregates. Below these depths, carbon fluxes decreased (48 ± 21% decrease on average between 200 and 400 m), and mixed aggregates composed of phytodetritus and fecal matter dominated, suggesting an important role played by physical aggregation in deep carbon export. Export efficiencies determined from gels, PPS3/3 traps and 234Th disequilibria (200 m carbon flux/net primary productivity) were negatively correlated to net primary productivity with observed decreases from ~ 0.2 at low-iron sites to ~ 0.02 at high-iron sites. Varying phytoplankton communities and grazing pressure appear to explain this negative relationship. Our work emphasises the need to consider detailed plankton communities to accurately identify the controls on carbon export efficiency, which appear to include small spatio-temporal variations in ecosystem structure.

2014 ◽  
Vol 11 (9) ◽  
pp. 13623-13673 ◽  
Author(s):  
E. C. Laurenceau ◽  
T. W. Trull ◽  
D. M. Davies ◽  
S. G. Bray ◽  
J. Doran ◽  
...  

Abstract. The first KErguelen Ocean and Plateau compared Study (KEOPS1), conducted in the naturally iron-fertilised Kerguelen bloom, demonstrated that fecal material was the main pathway for exporting carbon to the deep ocean during summer (January–February~2005), suggesting a~limited role of direct export via phytodetrital aggregates. The KEOPS2 project re-investigated this issue during the spring bloom initiation (October–November 2011), when zooplankton communities may exert limited grazing pressure, and explored further the link between carbon flux, export efficiency and dominant sinking particles depending upon surface plankton community structure. Sinking particles were collected in polyacrylamide gel-filled and standard free-drifting sediment traps (PPS3/3), deployed at six stations between 100 and 400 m to examine flux composition, particle origin and their size distributions. Results revealed an important contribution of phytodetrital aggregates (49 ± 10% and 45 ± 22% of the total number and volume of particles respectively, all stations and depths averaged). This high contribution dropped when converted to carbon content (30 ± 16% of total carbon, all stations and depths averaged), cylindrical fecal pellets representing then the dominant fraction (56 ± 19%). At 100 and 200 m depth, iron and biomass enriched sites exhibited the highest carbon fluxes (maxima of 180 and 84 ± 27 mg C m−2 d−1; based on gel and PPS3/3 trap collection respectively), especially where large fecal pellets dominated over phytodetrital aggregates. Below these depths, carbon fluxes decreased (48 ± 21% decrease in average between 200 and 400 m), and mixed aggregates composed of phytodetritus and fecal matter dominated, suggesting an important role played by physical aggregation in deep carbon export. Export efficiencies determined from gels, PPS3/3 traps and 234Th disequilibria (200 m carbon flux/net primary productivity), were negatively correlated to net primary productivity with observed decreases from ~ 0.2 at low-iron sites to ~ 0.02 at high-iron sites. Varying phytoplankton communities and grazing pressure appear to explain this negative relationship. Our work emphasizes the need to consider detailed plankton community structure to accurately identify the controls on carbon export efficiency, which appear to include small spatio-temporal variations of ecosystem structure.


2020 ◽  
Author(s):  
Lutz Beckebanze ◽  
Josefine Walz ◽  
Benjamin R.K. Runkle ◽  
David Holl ◽  
Irina V. Fedorova Fedorova ◽  
...  

<p>Permafrost-affected soils contain a large quantity of soil organic carbon (SOC). Two processes control the amount of carbon stored in soils. The photosynthetic activity of plants produces biomass that may accumulate in the soil, while microorganism’s respiration leads to a depletion of the soil carbon stocks through decomposition. The carbon balance defines whether a soil acts as a source or sink of carbon. In recent decades, many researchers observed and analyzed the carbon balance of permafrost soils. In most cases, the focus lays on observations of the vertical carbon flux (CO<sub>2</sub> and CH<sub>4</sub>) to estimate the carbon balance. However, there is lack of information regarding the lateral losses of carbon via dissolved organic carbon (DOC) or dissolved inorganic carbon (DIC) in ground- or rainwater.</p><p>In this study, we estimate the lateral carbon fluxes from a permafrost-affected site in north-eastern Siberia, Russia. Long-term measurements of vertical carbon fluxes have been conducted at this study site. By considering both, the vertical and the lateral carbon fluxes, we estimate the complete carbon balance for one growing season in 2014 and discuss the contribution of the lateral carbon flux to the overall carbon balance.</p><p>The results show that the vertical CO<sub>2</sub> fluxes dominate the carbon balance during the growing season from June 8<sup>th</sup> – September 8<sup>th</sup> (-19 ± 1.2 kg-C m<sup>-2</sup>). The lateral fluxes of DOC and DIC reached values of +0.1 ± 0.01 and +1.4 ± 0.09 kg-C m<sup>-2</sup>, respectively, whereas the vertical fluxes of CH<sub>4</sub> had values of +0.7 ± 0.02 kg-C m<sup>-2 </sup>integrated over this time. By considering the lateral carbon export, the net ecosystem carbon balance of the study area was reduced by 8%. On shorter time scales of days, the relationship between lateral and vertical flux changes within the growing season. Early in the growing season, the lateral carbon flux outpaces the weak vertical CO<sub>2</sub> uptake for a few days and converts the estimated carbon balance from a sink to a source.</p><p>We conclude that lateral carbon fluxes have a larger influence on the carbon balance of our study site on time scales of days (early and late growing season) and that this influence decreases with annual time scales. Therefore, the vertical carbon flux can be seen as a good approximation for the carbon balance of this study site on annual time scales.</p>


2013 ◽  
Vol 10 (2) ◽  
pp. 929-944 ◽  
Author(s):  
D. J. Charman ◽  
D. W. Beilman ◽  
M. Blaauw ◽  
R. K. Booth ◽  
S. Brewer ◽  
...  

Abstract. Peatlands are a major terrestrial carbon store and a persistent natural carbon sink during the Holocene, but there is considerable uncertainty over the fate of peatland carbon in a changing climate. It is generally assumed that higher temperatures will increase peat decay, causing a positive feedback to climate warming and contributing to the global positive carbon cycle feedback. Here we use a new extensive database of peat profiles across northern high latitudes to examine spatial and temporal patterns of carbon accumulation over the past millennium. Opposite to expectations, our results indicate a small negative carbon cycle feedback from past changes in the long-term accumulation rates of northern peatlands. Total carbon accumulated over the last 1000 yr is linearly related to contemporary growing season length and photosynthetically active radiation, suggesting that variability in net primary productivity is more important than decomposition in determining long-term carbon accumulation. Furthermore, northern peatland carbon sequestration rate declined over the climate transition from the Medieval Climate Anomaly (MCA) to the Little Ice Age (LIA), probably because of lower LIA temperatures combined with increased cloudiness suppressing net primary productivity. Other factors including changing moisture status, peatland distribution, fire, nitrogen deposition, permafrost thaw and methane emissions will also influence future peatland carbon cycle feedbacks, but our data suggest that the carbon sequestration rate could increase over many areas of northern peatlands in a warmer future.


2015 ◽  
Vol 15 (15) ◽  
pp. 21449-21494 ◽  
Author(s):  
X. Yue ◽  
N. Unger ◽  
Y. Zheng

Abstract. The terrestrial biosphere has experienced dramatic changes in recent decades. Estimates of historical trends in land carbon fluxes remain uncertain because long-term observations are limited on the global scale. Here, we use the Yale Interactive terrestrial Biosphere (YIBs) model to estimate decadal trends in land carbon fluxes and emissions of biogenic volatile organic compounds (BVOCs) and to identify the key drivers for these changes during 1982–2011. Driven with hourly meteorology from WFDEI (WATCH Forcing Data methodology applied to ERA-Interim data), the model simulates an increasing trend of 297 Tg C a−2 in gross primary productivity (GPP) and 185 Tg C a−2 in the net primary productivity (NPP). CO2 fertilization is the main driver for the flux changes in forest ecosystems, while meteorology dominates the changes in grasslands and shrublands. Warming boosts summer GPP and NPP at high latitudes, while drought dampens carbon uptake in tropical regions. North of 30° N, increasing temperatures induce a substantial extension of 0.22 day a−1 for the growing season; however, this phenological change alone does not promote regional carbon uptake and BVOC emissions. Nevertheless, increases of LAI at peak season accounts for ~ 25 % of the trends in GPP and isoprene emissions at the northern lands. The net land sink shows statistically insignificant increases of only 3 Tg C a−2 globally because of simultaneous increases in soil respiration. In contrast, driven with alternative meteorology from MERRA (Modern Era-Retrospective Analysis), the model predicts significant increases of 59 Tg C a−2 in the land sink due to strengthened uptake in the Amazon. Global BVOC emissions are calculated using two schemes. With the photosynthesis-dependent scheme, the model predicts increases of 0.4 Tg C a−2 in isoprene emissions, which are mainly attributed to warming trends because CO2 fertilization and inhibition effects offset each other. Using the MEGAN (Model of Emissions of Gases and Aerosols from Nature) scheme, the YIBs model simulates global reductions of 1.1 Tg C a−2 in isoprene and 0.04 Tg C a−2 in monoterpene emissions in response to the CO2 inhibition effects. Land use change shows limited impacts on global carbon fluxes and BVOC emissions, but there are regional contrasting impacts over Europe (afforestation) and China (deforestation).


2008 ◽  
Vol 5 (2) ◽  
pp. 561-583 ◽  
Author(s):  
M. Vetter ◽  
G. Churkina ◽  
M. Jung ◽  
M. Reichstein ◽  
S. Zaehle ◽  
...  

Abstract. Globally, the year 2003 is associated with one of the largest atmospheric CO2 rises on record. In the same year, Europe experienced an anomalously strong flux of CO2 from the land to the atmosphere associated with an exceptionally dry and hot summer in Western and Central Europe. In this study we analyze the magnitude of this carbon flux anomaly and key driving ecosystem processes using simulations of seven terrestrial ecosystem models of different complexity and types (process-oriented and diagnostic). We address the following questions: (1) how large were deviations in the net European carbon flux in 2003 relative to a short-term baseline (1998–2002) and to longer-term variations in annual fluxes (1980 to 2005), (2) which European regions exhibited the largest changes in carbon fluxes during the growing season 2003, and (3) which ecosystem processes controlled the carbon balance anomaly . In most models the prominence of 2003 anomaly in carbon fluxes declined with lengthening of the reference period from one year to 16 years. The 2003 anomaly for annual net carbon fluxes ranged between 0.35 and –0.63 Pg C for a reference period of one year and between 0.17 and –0.37 Pg C for a reference period of 16 years for the whole Europe. In Western and Central Europe, the anomaly in simulated net ecosystem productivity (NEP) over the growing season in 2003 was outside the 1σ variance bound of the carbon flux anomalies for 1980–2005 in all models. The estimated anomaly in net carbon flux ranged between –42 and –158 Tg C for Western Europe and between 24 and –129 Tg C for Central Europe depending on the model used. All models responded to a dipole pattern of the climate anomaly in 2003. In Western and Central Europe NEP was reduced due to heat and drought. In contrast, lower than normal temperatures and higher air humidity decreased NEP over Northeastern Europe. While models agree on the sign of changes in simulated NEP and gross primary productivity in 2003 over Western and Central Europe, models diverge in the estimates of anomalies in ecosystem respiration. Except for two process models which simulate respiration increase, most models simulated a decrease in ecosystem respiration in 2003. The diagnostic models showed a weaker decrease in ecosystem respiration than the process-oriented models. Based on the multi-model simulations we estimated the total carbon flux anomaly over the 2003 growing season in Europe to range between –0.02 and –0.27 Pg C relative to the net carbon flux in 1998–2002.


2015 ◽  
Vol 12 (12) ◽  
pp. 3831-3848 ◽  
Author(s):  
F. Planchon ◽  
D. Ballas ◽  
A.-J. Cavagna ◽  
A. R. Bowie ◽  
D. Davies ◽  
...  

Abstract. This study examined upper-ocean particulate organic carbon (POC) export using the 234Th approach as part of the second KErguelen Ocean and Plateau compared Study expedition (KEOPS2). Our aim was to characterize the spatial and the temporal variability of POC export during austral spring (October–November 2011) in the Fe-fertilized area of the Kerguelen Plateau region. POC export fluxes were estimated at high productivity sites over and downstream of the plateau and compared to a high-nutrient low-chlorophyll (HNLC) area upstream of the plateau in order to assess the impact of iron-induced productivity on the vertical export of carbon. Deficits in 234Th activities were observed at all stations in surface waters, indicating early scavenging by particles in austral spring. 234Th export was lowest at the reference station R-2 and highest in the recirculation region (E stations) where a pseudo-Lagrangian survey was conducted. In comparison 234Th export over the central plateau and north of the polar front (PF) was relatively limited throughout the survey. However, the 234Th results support that Fe fertilization increased particle export in all iron-fertilized waters. The impact was greatest in the recirculation feature (3–4 fold at 200 m depth, relative to the reference station), but more moderate over the central Kerguelen Plateau and in the northern plume of the Kerguelen bloom (~2-fold at 200 m depth). The C : Th ratio of large (>53 μm) potentially sinking particles collected via sequential filtration using in situ pumping (ISP) systems was used to convert the 234Th flux into a POC export flux. The C : Th ratios of sinking particles were highly variable (3.1 ± 0.1 to 10.5 ± 0.2 μmol dpm−1) with no clear site-related trend, despite the variety of ecosystem responses in the fertilized regions. C : Th ratios showed a decreasing trend between 100 and 200 m depth suggesting preferential carbon loss relative to 234Th possibly due to heterotrophic degradation and/or grazing activity. C : Th ratios of sinking particles sampled with drifting sediment traps in most cases showed very good agreement with ratios for particles collected via ISP deployments (>53 μm particles). Carbon export production varied between 3.5 ± 0.9 and 11.8 ± 1.3 mmol m−2 d−1 from the upper 100 m and between 1.8 ± 0.9 and 8.2 ± 0.9 mmol m−2 d−1 from the upper 200 m. The highest export production was found inside the PF meander with a range of 5.3 ± 1.0 to 11.8 ± 1.1 mmol m−2 d−1 over the 19-day survey period. The impact of Fe fertilization is highest inside the PF meander with 2.9–4.5-fold higher carbon flux at 200 m depth in comparison to the HNLC control station. The impact of Fe fertilization was significantly less over the central plateau (stations A3 and E-4W) and in the northern branch of the bloom (station F-L) with 1.6–2.0-fold higher carbon flux compared to the reference station R. Export efficiencies (ratio of export to primary production and ratio of export to new production) were particularly variable with relatively high values in the recirculation feature (6 to 27 %, respectively) and low values (1 to 5 %, respectively) over the central plateau (station A3) and north of the PF (station F-L), indicating spring biomass accumulation. Comparison with KEOPS1 results indicated that carbon export production is much lower during the onset of the bloom in austral spring than during the peak and declining phases in late summer.


2019 ◽  
Vol 19 (18) ◽  
pp. 12067-12082 ◽  
Author(s):  
Hengmao Wang ◽  
Fei Jiang ◽  
Jun Wang ◽  
Weimin Ju ◽  
Jing M. Chen

Abstract. In this study, both the Greenhouse Gases Observing Satellite (GOSAT) and the Orbiting Carbon Observatory 2 (OCO-2) XCO2 retrievals produced by the NASA Atmospheric CO2 Observations from Space (ACOS) project (version b7.3) are assimilated within the GEOS-Chem 4D-Var assimilation framework to constrain the terrestrial ecosystem carbon flux during 1 October 2014 to 31 December 2015. One inversion for the comparison, using in situ CO2 observations, and another inversion as a benchmark for the simulated atmospheric CO2 distributions of the real inversions, using global atmospheric CO2 trends and referred to as the poor-man inversion, are also conducted. The estimated global and regional carbon fluxes for 2015 are shown and discussed. CO2 observations from surface flask sites and XCO2 retrievals from Total Carbon Column Observing Network (TCCON) sites are used to evaluate the simulated concentrations with the posterior carbon fluxes. Globally, the terrestrial ecosystem carbon sink (excluding biomass burning emissions) estimated from GOSAT data is stronger than that inferred from OCO-2 data, weaker than the in situ inversion and matches the poor-man inversion the best. Regionally, in most regions, the land sinks inferred from GOSAT data are also stronger than those from OCO-2 data, and in North America, Asia and Europe, the carbon sinks inferred from GOSAT inversion are comparable to those from in situ inversion. For the latitudinal distribution of land sinks, the satellite-based inversions suggest a smaller boreal and tropical sink but larger temperate sinks in both the Northern and Southern Hemisphere than the in situ inversion. However, OCO-2 and GOSAT generally do not agree on which continent contains the smaller or larger sinks. Evaluations using flask and TCCON observations and the comparisons with in situ and poor-man inversions suggest that only GOSAT and the in situ inversions perform better than a poor-man solution. GOSAT data can effectively improve the carbon flux estimates in the Northern Hemisphere, while OCO-2 data, with the specific version used in this study, show only slight improvement. The differences of inferred land fluxes between GOSAT and OCO-2 inversions in different regions are mainly related to the spatial coverage, the data amount and the biases of these two satellite XCO2 retrievals.


2021 ◽  
Vol 118 (4) ◽  
pp. e2018269118
Author(s):  
Kirsten E. Poff ◽  
Andy O. Leu ◽  
John M. Eppley ◽  
David M. Karl ◽  
Edward F. DeLong

In the open ocean, elevated carbon flux (ECF) events increase the delivery of particulate carbon from surface waters to the seafloor by severalfold compared to other times of year. Since microbes play central roles in primary production and sinking particle formation, they contribute greatly to carbon export to the deep sea. Few studies, however, have quantitatively linked ECF events with the specific microbial assemblages that drive them. Here, we identify key microbial taxa and functional traits on deep-sea sinking particles that correlate positively with ECF events. Microbes enriched on sinking particles in summer ECF events included symbiotic and free-living diazotrophic cyanobacteria, rhizosolenid diatoms, phototrophic and heterotrophic protists, and photoheterotrophic and copiotrophic bacteria. Particle-attached bacteria reaching the abyss during summer ECF events encoded metabolic pathways reflecting their surface water origins, including oxygenic and aerobic anoxygenic photosynthesis, nitrogen fixation, and proteorhodopsin-based photoheterotrophy. The abundances of some deep-sea bacteria also correlated positively with summer ECF events, suggesting rapid bathypelagic responses to elevated organic matter inputs. Biota enriched on sinking particles during a spring ECF event were distinct from those found in summer, and included rhizaria, copepods, fungi, and different bacterial taxa. At other times over our 3-y study, mid- and deep-water particle colonization, predation, degradation, and repackaging (by deep-sea bacteria, protists, and animals) appeared to shape the biotic composition of particles reaching the abyss. Our analyses reveal key microbial players and biological processes involved in particle formation, rapid export, and consumption, that may influence the ocean’s biological pump and help sustain deep-sea ecosystems.


2015 ◽  
Vol 15 (20) ◽  
pp. 11931-11948 ◽  
Author(s):  
X. Yue ◽  
N. Unger ◽  
Y. Zheng

Abstract. The terrestrial biosphere has experienced dramatic changes in recent decades. Estimates of historical trends in land carbon fluxes remain uncertain because long-term observations are limited on the global scale. Here, we use the Yale Interactive terrestrial Biosphere (YIBs) model to estimate decadal trends in land carbon fluxes and emissions of biogenic volatile organic compounds (BVOCs) and to identify the key drivers for these changes during 1982–2011. Driven by hourly meteorology from WFDEI (WATCH forcing data methodology applied to ERA-Interim data), the model simulates an increasing trend of 297 Tg C a−2 in gross primary productivity (GPP) and 185 Tg C a−2 in the net primary productivity (NPP). CO2 fertilization is the main driver for the flux changes in forest ecosystems, while meteorology dominates the changes in grasslands and shrublands. Warming boosts summer GPP and NPP at high latitudes, while drought dampens carbon uptake in tropical regions. North of 30° N, increasing temperatures induce a substantial extension of 0.22 day a−1 for the growing season; however, this phenological change alone does not promote regional carbon uptake and BVOC emissions. Nevertheless, increases of leaf area index at peak season accounts for ~ 25 % of the trends in GPP and isoprene emissions at the northern lands. The net land sink shows statistically insignificant increases of only 3 Tg C a−2 globally because of simultaneous increases in soil respiration. Global BVOC emissions are calculated using two schemes. With the photosynthesis-dependent scheme, the model predicts increases of 0.4 Tg C a−2 in isoprene emissions, which are mainly attributed to warming trends because CO2 fertilization and inhibition effects offset each other. Using the MEGAN (Model of Emissions of Gases and Aerosols from Nature) scheme, the YIBs model simulates global reductions of 1.1 Tg C a−2 in isoprene and 0.04 Tg C a−2 in monoterpene emissions in response to the CO2 inhibition effects. Land use change shows limited impacts on global carbon fluxes and BVOC emissions, but there are regional contrasting impacts over Europe (afforestation) and China (deforestation).


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