ESTIMATION OF SUGARCANE YIELD AT PUNE WITH THE HELP OF METEOROLOGICAL PARAMETERS

Abstract Background Although extensive breeding efforts are ongoing in sugarcane (Saccharum officinarum L.), the average yield is far below the theoretical potential. Tillering is an important component of sugarcane yield, however, the molecular mechanism underlying tiller development is still elusive. The limited genomic data in sugarcane, particularly due to its complex and large genome, has hindered in-depth molecular studies. Results Herein, we generated full-length (FL) transcriptome from developing leaf and tiller bud samples based on PacBio Iso-Seq. In addition, we performed RNA-seq from tiller bud samples at three developmental stages (T0, T1 and T2) to uncover key genes and biological pathways involved in sugarcane tiller development. In total, 30,360 and 20,088 high-quality non-redundant isoforms were identified in leaf and tiller bud samples, respectively, representing 41,109 unique isoforms in sugarcane. Likewise, we identified 1063 and 1037 alternative splicing events identified in leaf and tiller bud samples, respectively. We predicted the presence of coding sequence for 40,343 isoforms, 98% of which was successfully annotated. Comparison with previous FL transcriptomes in sugarcane revealed 2963 unreported isoforms. In addition, we characterized 14,946 SSRs from 11,700 transcripts and 310 lncRNAs. By integrating RNA-seq with the FL transcriptome, 468 and 57 differentially expressed genes (DEG) were identified in T1vsT0 and T2vsT0, respectively. Strong up-regulation of several pyruvate phosphate dikinase and phosphoenolpyruvate carboxylase genes suggests enhanced carbon fixation and protein synthesis to facilitate tiller growth. Similarly, up-regulation of linoleate 9S-lipoxygenase and lipoxygenase genes in the linoleic acid metabolism pathway suggests high synthesis of key oxylipins involved in tiller growth and development. Conclusions Collectively, we have enriched the genomic data available in sugarcane and provided candidate genes for manipulating tiller formation and development, towards productivity enhancement in sugarcane.

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Nitrogen Leaching and Nitrogen Balance under Differing Nitrogen Fertilization for Sugarcane Cultivation on a Subtropical Island

Water ◽

10.3390/w13050740 ◽

2021 ◽

Vol 13 (5) ◽

pp. 740

Author(s):

Ken Okamoto ◽

Shinkichi Goto ◽

Toshihiko Anzai ◽

Shotaro Ando

Keyword(s):

N Uptake ◽

Fertilizer Application ◽

Application Rate ◽

N Fertilizer ◽

N Leaching ◽

N Recovery ◽

N Application ◽

Fertilizer Application Rate ◽

Sugarcane Yield ◽

Cropping Seasons

Fertilizer application during sugarcane cultivation is a main source of nitrogen (N) loads to groundwater on small islands in southwestern Japan. The aim of this study was to quantify the effect of reducing the N fertilizer application rate on sugarcane yield, N leaching, and N balance. We conducted a sugarcane cultivation experiment with drainage lysimeters and different N application rates in three cropping seasons (three years). N loads were reduced by reducing the first N application rate in all cropping seasons. The sugarcane yields of the treatment to which the first N application was halved (T2 = 195 kg ha−1 N) were slightly lower than those of the conventional application (T1 = 230 kg ha−1 N) in the first and third seasons (T1 = 91 or 93 tons ha−1, T2 = 89 or 87 tons ha−1). N uptake in T1 and T2 was almost the same in seasons 1 (186–188 kg ha−1) and 3 (147–151 kg ha−1). Based on the responses of sugarcane yield and N uptake to fertilizer reduction in two of the three years, T2 is considered to represent a feasible fertilization practice for farmers. The reduction of the first N fertilizer application reduced the underground amounts of N loads (0–19 kg ha−1). However, application of 0 N in the first fertilization would lead to a substantial reduction in yield in all seasons. Reducing the amount of N in the first application (i.e., replacing T1 with T2) improved N recovery by 9.7–11.9% and reduced N leaching by 13 kg ha−1. These results suggest that halving the amount of N used in the first application can improve N fertilizer use efficiency and reduce N loss to groundwater.

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