scholarly journals Integrating Biodiversity and Environmental Observations in Support of National Marine Sanctuary and Large Marine Ecosystem Assessments

Oceanography ◽  
2021 ◽  
Vol 34 (2) ◽  
Author(s):  
Henry Ruhl ◽  
◽  
Jennifer Brown ◽  
Alexandra Harper ◽  
Elliot Hazen ◽  
...  
Keyword(s):  
Marine Ecosystem ◽  
Deep Ocean ◽  
Environmental Dna ◽  
Noise Pollution ◽  
Marine Biodiversity ◽  
Underwater Imaging ◽  
Science Data ◽  
Metadata Standards ◽  
Large Marine Ecosystem ◽  
Ocean Observing

Species and habitats are the subjects of legislation that mandates reporting of information on ecosystem conditions. Improvements in sensors, sampling platforms, information systems, and collaborations among experts and information users now enables more effective and up-to-date information to meet regional and national needs. Specifically, advances in environmental DNA (eDNA)-based assessments of biodiversity, community science data, various underwater imaging devices, and environmental, behavioral, and physiology observations from animal telemetry provide new opportunities to address multiple requirements for reporting status and trends, including insights into life in the deep ocean. Passive and active acoustic sensors help monitor marine life, boat traffic, and noise pollution. Satellites provide repeated, frequent, and long-term records of many relevant variables from global to local scales and, when combined with numerical computer simulations, allow planning for future scenarios. Metadata standards facilitate the transfer of data from machine to machine, thus streamlining assessments and forecasting and providing knowledge directly to the public. The Marine Biodiversity Observation Network (MBON) facilitates this exchange of information on life in the sea. The collaborative efforts of the Central and Northern California Ocean Observing System (CeNCOOS) of the US Integrated Ocean Observing System and its partners provide an example of a regional MBON process for information delivery. This includes linking policy and management needs, prioritizing observing data from various platforms and methods, streamlining data handling practices, and delivery of information for management such as for the Monterey Bay National Marine Sanctuary and the California Current Large Marine Ecosystem, with iterative process adaptation.

Condominium Arrangements as a Legal Mechanism for the Conservation of the South China Sea Large Marine Ecosystem

2017 ◽  
Vol 2 (1) ◽  
pp. 52-87 ◽  
Author(s):  
Michelle Lim ◽  
Nengye Liu
Keyword(s):  
South China Sea ◽  
South China ◽  
Marine Ecosystem ◽  
The South China Sea ◽  
Collaborative Management ◽  
Marine Biodiversity ◽  
The South ◽  
Governance Arrangement ◽  
China Sea ◽  
Large Marine Ecosystem

The South China Sea Large Marine Ecosystem is one of the world’s richest marine biodiversity areas. The sea area is however the site of increasing tensions between its ten coastal States, six of which have competing claims in the South China Sea. The expanding populations and economies of the coastal States have also resulted in the growing depletion of the Sea’s rich marine resources. Coordinated approaches are needed to protect the unique biodiversity and natural resources of the South China Sea at the appropriate ecological scale. The continuation of sovereignty disputes are detrimental to all coastal states as well as international economic interests of non-claimant states which arise as a result of the Sea’s status as a globally important trade route. This paper urges coastal states to adopt a far-sighted outlook which ensures long-term sustainable ecosystems, livelihoods and economies of the region. To do this, a shift in approach which emphasises collaborative management of marine ecosystems is required instead of a scramble for sovereignty to exclusively exploit living and non-living resources. This paper therefore explores how the shared governance arrangement of a condominium could facilitate the exercise of sovereignty for the shared benefit of all coastal States. The paper argues that the condominium approach would enable State parties to put aside thorny sovereignty disputes in favour of collaboration to protect the area’s important and unique biodiversity.

scholarly journals Improved biodiversity detection using a large-volume environmental DNA sampler with in situ filtration and implications for marine eDNA sampling strategies

2022 ◽  
Author(s):  
Annette F. Govindarajan ◽  
Luke McCartin ◽  
Allan Adams ◽  
Elizabeth Allan ◽  
Abhimanyu Belani ◽  
...  
Keyword(s):  
Large Volume ◽  
Small Volume ◽  
Deep Ocean ◽  
Environmental Dna ◽  
Marine Biodiversity ◽  
Robotic Vehicle ◽  
Seawater Samples ◽  
Biodiversity Changes ◽  
Collection Strategies

Metabarcoding analysis of environmental DNA samples is a promising new tool for marine biodiversity and conservation. Typically, seawater samples are obtained using Niskin bottles and filtered to collect eDNA. However, standard sample volumes are small relative to the scale of the environment, conventional collection strategies are limited, and the filtration process is time consuming. To overcome these limitations, we developed a new large-volume eDNA sampler with in situ filtration, capable of taking up to 12 samples per deployment. We conducted three deployments of our sampler on the robotic vehicle Mesobot in the Flower Garden Banks National Marine Sanctuary in the northwestern Gulf of Mexico and collected samples from 20 to 400 m depth. We compared the large volume (~40-60 liters) samples collected by Mesobot with small volume (~2 liters) samples collected using the conventional CTD-mounted Niskin bottle approach. We sequenced the V9 region of 18S rRNA, which detects a broad range of invertebrate taxa, and found that while both methods detected biodiversity changes associated with depth, our large volume samples detected approximately 66% more taxa than the CTD small volume samples. We found that the fraction of the eDNA signal originating from metazoans relative to the total eDNA signal decreased with sampling depth, indicating that larger volume samples may be especially important for detecting metazoans in mesopelagic and deep ocean environments. We also noted substantial variability in biological replicates from both the large volume Mesobot and small volume CTD sample sets. Both of the sample sets also identified taxa that the other did not; although the number of unique taxa associated with the Mesobot samples was almost four times larger than those from the CTD samples. Large volume eDNA sampling with in situ filtration, particularly when coupled with robotic platforms, has great potential for marine biodiversity surveys, and we discuss practical methodological and sampling considerations for future applications.

scholarly journals Seismic surveys reduce cetacean sightings across a large marine ecosystem

2019 ◽  
Vol 9 (1) ◽  
Author(s):  
A. S. Kavanagh ◽  
M. Nykänen ◽  
W. Hunt ◽  
N. Richardson ◽  
M. J. Jessopp
Keyword(s):  
Large Scale ◽  
Spatial Scales ◽  
Marine Ecosystem ◽  
Noise Pollution ◽  
Marine Species ◽  
Seismic Survey ◽  
Specific Response ◽  
Seismic Surveys ◽  
Large Marine Ecosystem ◽  
Multiple Species

AbstractNoise pollution is increasing globally, and as oceans are excellent conductors of sound, this is a major concern for marine species reliant on sound for key life functions. Loud, impulsive sounds from seismic surveys have been associated with impacts on many marine taxa including mammals, crustaceans, cephalopods, and fish. However, impacts across large spatial scales or multiple species are rarely considered. We modelled over 8,000 hours of cetacean survey data across a large marine ecosystem covering > 880,000 km2 to investigate the effect of seismic surveys on baleen and toothed whales. We found a significant effect of seismic activity across multiple species and habitats, with an 88% (82–92%) decrease in sightings of baleen whales, and a 53% (41–63%) decrease in sightings of toothed whales during active seismic surveys when compared to control surveys. Significantly fewer sightings of toothed whales also occurred during active versus inactive airgun periods of seismic surveys, although some species-specific response to noise was observed. This study provides strong evidence of multi-species impacts from seismic survey noise on cetaceans. Given the global proliferation of seismic surveys and large propagation distances of airgun noise, our results highlight the large-scale impacts that marine species are currently facing.

scholarly journals Environmental DNA in a Global Biodiversity Hotspot: Lessons from Coral Reef Fish Diversity Across the Indonesian Archipelago

2021 ◽  
Author(s):  
Onny N. Marwayana ◽  
Zachary Gold ◽  
Paul H. Barber
Keyword(s):  
Survey Methods ◽  
Marine Ecosystem ◽  
Sampling Site ◽  
Environmental Dna ◽  
Marine Biodiversity ◽  
Fish Diversity ◽  
Sampling Effort ◽  
Coral Triangle ◽  
Regional Patterns ◽  
Biodiversity Survey

AbstractIndonesia is the heart of the Coral Triangle, the world’s most diverse marine ecosystem. Preserving the biological and economic value of this marine biodiversity requires efficient and economical ecosystem monitoring, yet our understanding of marine biodiversity in this region remains limited. This study uses environmental DNA (eDNA) to survey fish communities across a pronounced biodiversity gradient in Indonesia. A total of 12,939,690 sequence reads of MiFish12SrRNA from 39 sites spanning 7 regions of Indonesia revealed 4,146 Amplified Sequence Variants (ASVs). Regional patterns of fish diversity based on eDNA broadly conformed to expectations based on traditional biodiversity survey methods, with the highest fish biodiversity in Raja Ampat and generally lower diversity in Western Indonesia. However, eDNA performed relatively poorly compared to visual survey methods in site-by-site comparisons, both in terms of total number of taxa recovered and ability to assign species names to ASVs. This result stands in a stark contrast to eDNA studies of temperate and tropical ecosystems with lower diversity. Analyses show that while sequencing depth was sufficient to capture all fish diversity within individual seawater samples, variation among samples from individual localities was high, and sampling effort was insufficient to capture all fish diversity at a given sampling site. Interestingly, mean ASVs recovered per one-liter seawater was surprisingly similar across sites, despite substantial differences in total diversity, suggesting a limit to total ASVs (~200) per one-liter eDNA sample. Combined, results highlight two major challenges of eDNA in highly diverse ecosystems such as the Coral Triangle. First, reference databases are incomplete and insufficient for effective ASV taxonomic assignment. Second, eDNA sampling design developed from lower diversity temperate marine ecosystems are inadequate to fully capture diversity of biodiversity hotspots like the Coral Triangle.

scholarly journals A review of cephalopods (Phylum: Mollusca) of the Canary Current Large Marine Ecosystem (Central-East Atlantic, African coast)

2021 ◽  
pp. 1-25
Author(s):  
Amanda Luna ◽  
Francisco Rocha ◽  
Catalina Perales-Raya
Keyword(s):  
North Atlantic ◽  
Atlantic Coast ◽  
Marine Ecosystem ◽  
Western Sahara ◽  
Guinea Bissau ◽  
Distribution Ranges ◽  
Large Marine Ecosystem ◽  
Sepiola Atlantica ◽  
First Time ◽  
Subsequent Identification

Abstract An extensive review of cephalopod fauna in the Central and North Atlantic coast of Africa was performed based on material collected during 10 research cruises in these waters. In the Canary Current Large Marine Ecosystem (CCLME) area, a total of 378,377 cephalopod specimens was collected from 1247 bottom trawl stations. Of those specimens, 300 were sampled for subsequent identification in the laboratory and found to belong to 65 different species and 23 families. After an exhaustive review of the existing literature on the cephalopods and new data obtained from the surveys, an updated checklist of 138 species was generated for the CCLME area. Our knowledge of the known geographic distribution ranges of several species has been expanded: Muusoctopus januarii has been sighted from Guinea–Bissau waters, passing through Western Sahara, to Morocco waters for the first time; Lepidoteuthis grimaldii and Octopus salutii have been sighted off Morocco waters for the first time; Austrorossia mastigophora, Abralia (Heterabralia) siedleckyi, Abralia (Pygmabralia) redfieldi and Sepiola atlantica have been cited off Western Sahara waters for the first time; Magnoteuthis magna, Abralia (Asteroteuthis) veranyi and Octopoteuthis megaptera have been sighted off Moroccan and Western Sahara waters for the first time; Ancistroteuthis lichtensteinii, Opisthoteuthis grimaldii, Onykia robsoni, Muusoctopus levis and Bathypolypus valdiviae have been cited in the Guinea–Bissau coast for the first time; the northern geographic limit of Bathypolypus ergasticus has been expanded to Morocco, Western Sahara and Mauritania and southward to Guinea–Bissau waters. The presence of Muusoctopus johnsonianus in Senegalese waters has been reported for the first time. A Chtenopteryx sicula specimen was reported in Western Sahara waters. A specimen belonging to the poorly known Cirrothauma murrayi species was found in South Moroccan waters. Amphitretus pelagicus, a probably cosmopolitan species, has been reported in the Western Sahara and Guinea–Bissau waters. Some species that were previously recorded in the area, Sepia angulata, Sepia hieronis, Heteroteuthis dagamensis, Helicocranchia joubini and Tremoctopus gelatus, were removed from the final checklist and considered to be not present in the CCLME area. Cycloteuthis akimushkini was substituted with Cycloteuthis sirventi, its senior synonym, in the final checklist. Similarly, Mastigoteuthis flammea and Mastigoteuthis grimaldii were substituted with Mastigoteuthis agassizii.

scholarly journals On the robustness of an eastern boundary upwelling ecosystem exposed to multiple stressors

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Ndague Diogoul ◽  
Patrice Brehmer ◽  
Hervé Demarcq ◽  
Salaheddine El Ayoubi ◽  
Abou Thiam ◽  
...  
Keyword(s):  
Multiple Stressors ◽  
Marine Ecosystem ◽  
Trophic Levels ◽  
Sea Surface ◽  
Relative Index ◽  
Upwelling System ◽  
The North ◽  
Latitudinal Shift ◽  
Large Marine Ecosystem ◽  
North And South

AbstractThe resistance of an east border upwelling system was investigated using relative index of marine pelagic biomass estimates under a changing environment spanning 20-years in the strongly exploited southern Canary Current Large marine Ecosystem (sCCLME). We divided the sCCLME in two parts (north and south of Cap Blanc), based on oceanographic regimes. We delineated two size-based groups (“plankton” and “pelagic fish”) corresponding to lower and higher trophic levels, respectively. Over the 20-year period, all spatial remote sensing environmental variables increased significantly, except in the area south of Cap Blanc where sea surface Chlorophyll-a concentrations declined and the upwelling favorable wind was stable. Relative index of marine pelagic abundance was higher in the south area compared to the north area of Cap Blanc. No significant latitudinal shift to the mass center was detected, regardless of trophic level. Relative pelagic abundance did not change, suggesting sCCLME pelagic organisms were able to adapt to changing environmental conditions. Despite strong annual variability and the presence of major stressors (overfishing, climate change), the marine pelagic ressources, mainly fish and plankton remained relatively stable over the two decades, advancing our understanding on the resistance of this east border upwelling system.

scholarly journals Critical In-Water Habitats for Post-Nesting Sea Turtles from the Southern Gulf of Mexico

2021 ◽  
Vol 9 (8) ◽  
pp. 793
Author(s):  
Abigail Uribe-Martínez ◽  
María de los Angeles Liceaga-Correa ◽  
Eduardo Cuevas
Keyword(s):  
Gulf Of Mexico ◽  
Marine Ecosystem ◽  
Satellite Telemetry ◽  
Marine Turtle ◽  
Home Ranges ◽  
The Bahamas ◽  
Turtle Species ◽  
Southern Gulf Of Mexico ◽  
Large Marine Ecosystem ◽  
Physical Features

Marine turtles are globally endangered species that spend more than 95% of their life cycle in in-water habitats. Nevertheless, most of the conservation, recovery and research efforts have targeted the on-land habitats, due to their easier access, where adult females lay their eggs. Targeting the large knowledge gaps on the in-water critical habitats of turtles, particularly in the Large Marine Ecosystem Gulf of Mexico, is crucial for their conservation and recovery in the long term. We used satellite telemetry to track 85 nesting females from their beaches after they nested to identify their feeding and residency habitats, their migratory corridors and to describe the context for those areas. We delimited major migratory corridors in the southern Gulf of Mexico and West Caribbean and described physical features of internesting and feeding home ranges located mainly around the Yucatan Peninsula and Veracruz, Mexico. We also contributed by describing general aggregation and movement patterns for the four marine turtle species in the Atlantic, expanding the knowledge of the studied species. Several tracked individuals emigrated from the Gulf of Mexico to as far as Nicaragua, Honduras, and the Bahamas. This information is critical for identifying gaps in marine protection and for deciphering the spatial connectivity in large ocean basins, and it provides an opportunity to assess potential impacts on marine turtle populations and their habitats.

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