scholarly journals Molecular Abiotic Stress Tolerans Strategies: From Genetic Engineering to Genome Editing Era

2020 ◽  
Author(s):  
Sinan Meriç ◽  
Alp Ayan ◽  
Çimen Atak

In last decades, plants were increasingly subjected to multiple environmental abiotic stress factors as never before due to their stationary nature. Excess urbanization following the intense industrial applications introduced combinations of abiotic stresses as heat, drought, salinity, heavy metals etc. to plants in various intensities. Technological advancements brought novel biotechnological tools to the abiotic stress tolerance area as an alternative to time and money consuming traditional crop breeding activities as well as they brought vast majority of the problem themselves. Discoveries of single gene (as osmoprotectant, detoxyfying enzyme, transporter protein genes etc.) and multi gene (biomolecule synthesis, heat shock protein, regulatory transcription factor and signal transduction genes etc.) targets through functional genomic approaches identified abiotic stress responsive genes through EST based cDNA micro and macro arrays. In nowadays, genetic engineering and genome editing tools are present to transfer genes among different species and modify these target genes in site specific, even single nuclotide specific manner. This present chapter will evaluate genomic engineering approaches and applications targeting these abiotic stress tolerance responsive mechanisms as well as future prospects of genome editing applications in this field.

Author(s):  
Riwandahun Marwein ◽  
Johni Debbarma ◽  
Yogita N. Sarki ◽  
Indrani Baruah ◽  
Banashree Saikia ◽  
...  

Author(s):  
Ali Razzaq ◽  
Ghulam Mustafa ◽  
Muhammad Amjad Ali ◽  
Muhammad Sarwar Khan ◽  
Faiz Ahmad Joyia

Abstract This chapter discusses the applications of CRISPR-mediated genome editing to improve the abiotic stress tolerance (such as drought, heat, waterlogging and cold tolerance) of maize. CRISPR/Cas9 has great potential for maize genome manipulation at desired sites. By using CRISPR/Cas9-mediated genome editing, numerous genes can be targeted to produce elite maize cultivars that minimize the challenges of abiotic stresses. In the future, more precise and accurate variants of the CRISPR/Cas9 toolbox are expected to be used for maize yield improvement.


PeerJ ◽  
2020 ◽  
Vol 8 ◽  
pp. e10206
Author(s):  
Juanjuan Huang ◽  
Shengji Wang ◽  
Xingdou Wang ◽  
Yan Fan ◽  
Youzhi Han

Ethylene response factors (ERFs) are plant-specific transcription factors (TFs) that play important roles in plant growth and stress defense and have received a great amount of attention in recent years. In this study, seven ERF genes related to abiotic stress tolerance and response were identified in plants of the Populus genus. Systematic bioinformatics, including sequence phylogeny, genome organisation, gene structure, gene ontology (GO) annotation, etc. were detected. Expression-pattern of these seven ERF genes were analyzed using RT-qPCR and cross validated using RNA-Seq. Data from a phylogenetic tree and multiple alignment of protein sequences indicated that these seven ERF TFs belong to three subfamilies and contain AP2, YRG, and RAYD conserved domains, which may interact with downstream target genes to regulate the plant stress response. An analysis of the structure and promoter region of these seven ERF genes showed that they have multiple stress-related motifs and cis-elements, which may play roles in the plant stress-tolerance process through a transcriptional regulation mechanism; moreover, the cellular_component and molecular_function terms associated with these ERFs determined by GO annotation supported this hypothesis. In addition, the spatio-temporal expression pattern of these seven ERFs, as detected using RT-qPCR and RNA-seq, suggested that they play a critical role in mediating the salt response and tolerance in a dynamic and tissue-specific manner. The results of this study provide a solid basis to explore the functions of the stress-related ERF TFs in Populus abiotic stress tolerance and development process.


2009 ◽  
Vol 26 (1) ◽  
pp. 125-134 ◽  
Author(s):  
Mohammad Sayyar Khan ◽  
Xiang Yu ◽  
Akira Kikuchi ◽  
Masashi Asahina ◽  
Kazuo N. Watanabe

2022 ◽  
pp. 331-354
Author(s):  
Akbar Hossain ◽  
Md. Muzahid E. Rahman ◽  
Sahin Ali ◽  
Tanjina Islam ◽  
M. Abu Syed ◽  
...  

2019 ◽  
Vol 71 (2) ◽  
pp. 470-479 ◽  
Author(s):  
Syed Adeel Zafar ◽  
Syed Shan-e-Ali Zaidi ◽  
Yashika Gaba ◽  
Sneh Lata Singla-Pareek ◽  
Om Parkash Dhankher ◽  
...  

Recent developments in genome editing tools have raised hopes for societal acceptance of genome-edited/modified crops. We present a critical evaluation of these tools in tackling abiotic stress, a highly complex and multigenic trait.


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