scholarly journals Morphological and molecular identification of ascomycetous coprophilous fungi occurring on feces of some bird species

2016 ◽  
Vol 6 (3) ◽  
pp. 210-217
Author(s):  
M Torbati
Keyword(s):  
Molecular Identification ◽  
Bird Species ◽  
Coprophilous Fungi

scholarly journals Molecular identification of coprophilous microfungi from Banyumas District, Central Java, Indonesia

2021 ◽  
Vol 22 (3) ◽  
Author(s):  
Aris Mumpuni ◽  
Adi Amurwanto ◽  
Daniel Joko Wahyono
Keyword(s):  
Organic Matter ◽  
Molecular Identification ◽  
Animal Waste ◽  
Mechanical Degradation ◽  
Lignocellulosic Material ◽  
Coprophilous Fungi ◽  
Central Java ◽  
Comprehensive Picture ◽  
Herbivorous Animal ◽  
Aspergillus Sp

Abstract. Mumpuni A, Amurwanto A, Wahyono DJ. 2021. Molecular identification of coprophilous microfungi from Banyumas District, Central Java, Indonesia. Biodiversitas 22: 1550-1557. Coprophilous microfungi are a group of fungi that are ecologically interesting in relation to herbivores. These fungi play a predominant role in the decomposition of organic matter, in which the organic matter passes through a series of events involving mechanical degradation, as well as physical and biological processes. The role of coprophilous fungi as the main decomposers of the lignocellulosic material of herbivorous animal waste, which is widespread in nature, is very important. Previous research on the inventory and identification of coprophilous fungi in the Banyumas district has been limited to macroscopic genera, so the results have not been able to provide a comprehensive picture of the presence of coprophilous fungi in the region. Identification of the types of microscopic coprophilous fungi that live in herbivorous animal waste, such as lignocellulosic material, is necessary to understand the taxonomy of these fungi. This study aimed to investigate and identify microscopic coprophilous fungi obtained in the Banyumas district of Central Java, Indonesia. Based on the purposive random sampling method, the obtained fungi were analyzed using the molecular methods of DNA isolation, gene amplification, DNA sequencing and phylogenetic analysis of fungal cultures. The following species and genera were identified: Ceriporia lacerata, Trichosporon insectorum, Lentinus squarrosulus, Fusarium sp., Aspergillus sp., and Trichosporon sp.

Molecular identification of bird species in the diet of the bird‐like noctule bat in Japan

2020 ◽  
Author(s):  
C. Ibáñez ◽  
D. Fukui ◽  
A .G. Popa‐Lisseanu ◽  
D. Pastor‐Beviá ◽  
J. L. García‐Mudarra ◽  
...  
Keyword(s):  
Molecular Identification ◽  
Bird Species

Electron microscopy in diagnostic virology

1984 ◽  
Vol 42 ◽  
pp. 70-73
Author(s):  
S. E. Miller
Keyword(s):  
Electron Microscopy ◽  
Tissue Culture ◽  
Molecular Identification ◽  
Point Of View ◽  
Negative Stain ◽  
Viral Diagnosis ◽  
Electron Microscopist ◽  
Diagnostic Virology

The techniques for detecting viruses are many and varied including FAT, ELISA, SPIRA, RPHA, SRH, TIA, ID, IEOP, GC (1); CF, CIE (2); Tzanck (3); EM, IEM (4); and molecular identification (5). This paper will deal with viral diagnosis by electron microscopy and will be organized from the point of view of the electron microscopist who is asked to look for an unknown agent--a consideration of the specimen and possible agents rather than from a virologist's view of comparing all the different viruses. The first step is to ascertain the specimen source and select the method of preparation, e. g. negative stain or embedment, and whether the sample should be precleared by centrifugation, concentrated, or inoculated into tissue culture. Also, knowing the type of specimen and patient symptoms will lend suggestions of possible agents and eliminate some viruses, e. g. Rotavirus will not be seen in brain, nor Rabies in stool, but preconceived notions should not prejudice the observer into missing an unlikely pathogen.

Functional evenness of bird communities varies along the elevational gradient in Europe: Conservation implications

2019 ◽  
Author(s):  
Federico Morelli ◽  
Yanina
Keyword(s):  
Species Richness ◽  
Elevation Gradient ◽  
Bird Species ◽  
Elevational Gradient ◽  
Negative Association ◽  
Bird Communities ◽  
Breeding Bird ◽  
Bird Species Richness ◽  
Large Spatial Scale ◽  
Functional Evenness

ContextThe negative association between elevation and species richness is a well-recognized pattern in macro-ecology. ObjectivesThe aim of this study was to investigate changes in functional evenness of breeding bird communities along an elevation gradient in Europe. MethodsUsing the bird data from the EBCC Atlas of European Breeding Birds we estimated an index of functional evenness which can be assumed as a measure of the potential resilience of communities.ResultsOur findings confirm the existence of a negative association between elevation and bird species richness in all European eco regions. However, we also explored a novel aspect of this relationship, important for conservation: Our findings provide evidence at large spatial scale of a negative association between the functional evenness (potential community resilience) and elevation, independent of the eco region. We also found that the Natura2000 protected areas covers the territory most in need of protection, those characterized by bird communities with low potential resilience, in hilly and mountainous areas.ConclusionsThese results draw attention to European areas occupied by bird communities characterized by a potential lower capacity to respond to strong ecological changes, and, therefore, potentially more exposed to risks for conservation.

Experimentally increased costs of parental care are shunted to offspring in species with extended care

2019 ◽  
Author(s):  
Gretchen F. Wagner ◽  
Emeline Mourocq ◽  
Michael Griesser
Keyword(s):  
Life History ◽  
Parental Care ◽  
Total Duration ◽  
Bird Species ◽  
Life History Strategy ◽  
Experimental Treatment ◽  
Cost Of Care ◽  
Adult Survival ◽  
Supporting Evidence ◽  
Trade Offs

Biparental care systems are a valuable model to examine conflict, cooperation, and coordination between unrelated individuals, as the product of the interactions between the parents influences the fitness of both individuals. A common experimental technique for testing coordinated responses to changes in the costs of parental care is to temporarily handicap one parent, inducing a higher cost of providing care. However, dissimilarity in experimental designs of these studies has hindered interspecific comparisons of the patterns of cost distribution between parents and offspring. Here we apply a comparative experimental approach by handicapping a parent at nests of five bird species using the same experimental treatment. In some species, a decrease in care by a handicapped parent was compensated by its partner, while in others the increased costs of care were shunted to the offspring. Parental responses to an increased cost of care primarily depended on the total duration of care that offspring require. However, life history pace (i.e., adult survival and fecundity) did not influence parental decisions when faced with a higher cost of caring. Our study highlights that a greater attention to intergenerational trade-offs is warranted, particularly in species with a large burden of parental care. Moreover, we demonstrate that parental care decisions may be weighed more against physiological workload constraints than against future prospects of reproduction, supporting evidence that avian species may devote comparable amounts of energy into survival, regardless of life history strategy.

Elevated nest predation risk promotes offspring size variation in birds with prolonged parental care.

2019 ◽  
Author(s):  
Gretchen F. Wagner ◽  
Emeline Mourocq ◽  
Michael Griesser
Keyword(s):  
Predation Risk ◽  
Reproductive Cycle ◽  
Perceived Risk ◽  
Nest Predation ◽  
Bird Species ◽  
Size Variation ◽  
Egg Laying ◽  
Offspring Size ◽  
Natural Predation ◽  
Risk Spreading

Predation of offspring is the main cause of reproductive failure in many species, and the mere fear of offspring predation shapes reproductive strategies. Yet, natural predation risk is ubiquitously variable and can be unpredictable. Consequently, the perceived prospect of predation early in a reproductive cycle may not reflect the actual risk to ensuing offspring. An increased variance in investment across offspring has been linked to breeding in unpredictable environments in several taxa, but has so far been overlooked as a maternal response to temporal variation in predation risk. Here, we experimentally increased the perceived risk of nest predation prior to egg-laying in seven bird species. Species with prolonged parent-offspring associations increased their intra-brood variation in egg, and subsequently offspring, size. High risk to offspring early in a reproductive cycle can favour a risk-spreading strategy particularly in species with the greatest opportunity to even out offspring quality after fledging.

Three hundred years of House Sparrow (Passer domesticus) persecution in Germany

2007 ◽  
Vol 34 (2) ◽  
pp. 307-317 ◽  
Author(s):  
J. SEITZ
Keyword(s):  
Rural Areas ◽  
House Sparrow ◽  
Bird Species ◽  
Passer Domesticus ◽  
Second World War ◽  
Population Increase ◽  
World War ◽  
Large Numbers ◽  
Urban And Rural Areas ◽  
Second World

Modernization of agriculture, economic development and population increase after the end of the Thirty Years' War caused authorities in many parts of Germany to decree the eradication of so-called pest animals, including the House Sparrow. Farmers were given targets, and had to deliver the heads of sparrows in proportion to the size of their farms or pay fines. At the end of the eighteenth century German ornithologists argued against the eradication of the sparrows. During the mid-nineteenth century, C. L. Gloger, the pioneer of bird protection in Germany, emphasized the value of the House Sparrow in controlling insect plagues. Many decrees were abolished because either they had not been obeyed, or had resulted in people protecting sparrows so that they always had enough for their “deliveries”. Surprisingly, various ornithologists, including Ernst Hartert and the most famous German bird conservationist Freiherr Berlepsch, joined in the war against sparrows at the beginning of the twentieth century, because sparrows were regarded as competitors of more useful bird species. After the Second World War, sparrows were poisoned in large numbers. Persecution of sparrows ended in Germany in the 1970s. The long period of persecution had a significant but not long-lasting impact on House Sparrow populations, and therefore cannot be regarded as a factor in the recent decline of this species in urban and rural areas of western and central Europe.

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