scholarly journals Taxonomic revision of black salamanders of the Aneides flavipunctatus complex (Caudata: Plethodontidae)

PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e7370 ◽  
Author(s):  
Sean B. Reilly ◽  
David B. Wake
Keyword(s):  
San Francisco ◽  
Taxonomic Revision ◽  
Detailed Examination ◽  
Molecular Data ◽  
Morphological Data ◽  
The South ◽  
Humboldt County ◽  
Russian River ◽  
Putah Creek ◽  
Shasta County

We present a taxonomic revision of the black salamander (Aneides flavipunctatus) complex of northwestern California and extreme southeastern Oregon. The revision is based on a number of published works as well as new molecular and morphological data presented herein. The subspecies Aneides flavipunctatus niger Myers & Maslin 1948 is raised in rank to a full species. It is isolated far to the south of the main range on the San Francisco Peninsula, south and west of San Francisco Bay. Another geographically isolated set of populations occurs well inland in Shasta County, northern CA, mainly in the vicinity of Shasta Lake. It is raised from synonymy and recognized as Aneides iecanus (Cope 1883). The remaining taxa occur mainly along and inland from the coast from the vicinity of the Russian River and Lake Berryessa/Putah Creek, north to the vicinity of the Smith River near the Oregon border and more inland along the Klamath and Trinity Rivers and tributaries into Oregon. The northern segment of this nearly continuous range is named Aneides klamathensis Reilly and Wake 2019. We use molecular data to provide a detailed examination of a narrow contact zone between the northern A. klamathensis and the more southern A. flavipunctatus in southern Humboldt County in the vicinity of the Van Duzen and main fork of the Eel rivers. To the south is the remnant of the former species and it takes the name Aneides flavipunctatus (Strauch 1870). It is highly diversified morphologically and genetically and requires additional study.

scholarly journals Disentangling relationships among eastern Mediterranean Cymbalaria including description of a novel species from the southern Peloponnese (Greece)

2021 ◽  
Vol 307 (2) ◽  
Author(s):  
Pau Carnicero ◽  
Núria Garcia-Jacas ◽  
Llorenç Sáez ◽  
Theophanis Constantinidis ◽  
Mercè Galbany-Casals
Keyword(s):  
Eastern Mediterranean ◽  
Phylogenetic Analyses ◽  
Taxonomic Revision ◽  
Distribution Patterns ◽  
Morphological Characters ◽  
Molecular Data ◽  
Morphological Data ◽  
Long Distance ◽  
Aegean Islands ◽  
Molecular Phylogenetic

AbstractThe eastern Mediterranean basin hosts a remarkably high plant diversity. Historical connections between currently isolated areas across the Aegean region and long-distance dispersal events have been invoked to explain current distribution patterns of species. According to most recent treatments, at least two Cymbalaria species occur in this area, Cymbalaria microcalyx and C. longipes. The former comprises several intraspecific taxa, treated at different ranks by different authors based on morphological data, evidencing the need of a taxonomic revision. Additionally, some populations of C. microcalyx show exclusive morphological characters that do not match any described taxon. Here, we aim to shed light on the systematics of eastern Mediterranean Cymbalaria and to propose a classification informed by various sources of evidence. We performed molecular phylogenetic analyses using ITS, 3’ETS, ndhF and rpl32-trnL sequences and estimated the ploidy level of some taxa performing relative genome size measures. Molecular data combined with morphology support the division of traditionally delimited C. microcalyx into C. acutiloba, C. microcalyx and C. minor, corresponding to well-delimited nrDNA lineages. Furthermore, we propose to combine C. microcalyx subsp. paradoxa at the species level. A group of specimens previously thought to belong to Cymbalaria microcalyx constitute a well-defined phylogenetic and morphological entity and are described here as a new species, Cymbalaria spetae. Cymbalaria longipes is non-monophyletic, but characterized by being glabrous and diploid, unlike other eastern species. The nrDNA data suggest at least two dispersals from the mainland to the Aegean Islands, potentially facilitated by marine regressions.

A re-assessment of the Poecilimon syriacus group (Orthoptera Tettigonioidea, Phaneropteridae) based on bioacoustics, morphology and molecular data

2008 ◽  
Vol 39 (4) ◽  
pp. 361-379 ◽  
Author(s):  
Hasan Sevgili ◽  
Klaus-Gerhard Heller ◽  
Klaus Reinhold
Keyword(s):  
Repetition Rate ◽  
Male Genitalia ◽  
Molecular Data ◽  
Morphological Data ◽  
The South ◽  
The West ◽  
Syllable Repetition ◽  
Data Missing

AbstractIn this paper a combination of characters is described by which Poecilimon species (Orthoptera, Tettigonioidea, Phaneropteridae) can be recognised as members of the P. syriacus group. All species occur in or around Anatolia – from the island of Samos in the West and the provinces of Artvin and Bitlis in the East to Jerusalem in the South. The molecular data (Ullrich 2007) suggest the following not completely resolved relationship (ersisi (syriacus, (karakushi, (angulatus, obtusicercus n. sp.)), (xenocercus, karabukensis), ((izmirensis, ege) serratus))), while P. uvarovi and P. adentatus as well as P. kutahiensis (molecular data missing) are also considered to belong to the group according to song and/or morphology. The morphological data previously used to define the group are not sufficient to recognize all of its members. Some species differed distinctly in the structure of male genitalia, but the calling songs of all species studied are characterized by an unusually high syllable repetition rate and low number of impulses per syllable. Thus the evolution of genitalia seems to be faster than that of song patterns.

Integrative taxonomic revision of the polymorphic flat-millipede genera Oncocladosoma and Somethus in South Australia (Diplopoda : Polydesmida : Paradoxosomatidae)

2016 ◽  
Vol 30 (3) ◽  
pp. 201 ◽  
Author(s):  
Peter Decker
Keyword(s):  
New Records ◽  
Sequence Data ◽  
South Australia ◽  
Taxonomic Revision ◽  
Molecular Data ◽  
Integrative Approach ◽  
28S Rrna ◽  
The South ◽  
Coi Barcoding ◽  
Molecular Phylogenetic

The South Australian members of the flat-millipede genera Oncocladosoma Jeekel, 1985 and Somethus Chamberlin, 1920 are revised using an integrative approach incorporating sequence data and morphology. The partial mitochondrial cytochrome c oxidase subunit I (COI) barcoding gene and partial nuclear ribosomal 28S rRNA were amplified and sequenced for 15 Oncocladosoma specimens and 10 Somethus specimens and the datasets were used for molecular phylogenetic analysis and genetic distance determination. Both morphology and molecular data indicate that all species of Oncocladosoma fall within Somethus, and therefore, Oncocladosoma is synonymised with Somethus. Within those species supported by molecular data, features of the solenomere tip are relatively stable and useful for species identification. 28S rRNA has proven to provide sufficient nucleotide variation to provisionally discriminate species. Oncocladosoma castaneum ingens Jeekel, 1985, O. clavigerum Jeekel, 1985 and O. conigerum Jeekel, 1985 are junior synonyms of Somethus castaneus, comb. nov., and Somethus modicus Jeekel, 2002 is a synonym of S. scopiferus Jeekel, 2002. New records and electron scanning micrographs of gonopods are provided for S. castaneus, comb. nov., S. inflatus (Jeekel, 2002), comb. nov., S. lancearius Jeekel, 2002, S. scopiferus Jeekel, 2002, and Somethus grossi Jeekel, 1985, together with a key to the South Australian species of Somethus.

scholarly journals Taxonomic revision of Australian Amobia Robineau-Desvoidy, 1830 (Sarcophagidae: Miltogramminae): integrating morphology and genetics finds a new species and tackles old problems

2020 ◽  
Vol 722 ◽  
pp. 75-96 ◽  
Author(s):  
Nikolas P. Johnston ◽  
James F. Wallman ◽  
Mark Dowton ◽  
Krzysztof Szpila ◽  
Thomas Pape
Keyword(s):  
New Species ◽  
Molecular Phylogenetics ◽  
Taxonomic Revision ◽  
Integrated Approach ◽  
Molecular Data ◽  
Morphological Data ◽  
Mitochondrial Coi ◽  
Australian Species ◽  
Morphological Species ◽  
A New Species

A taxonomic revision of the Australian species of Amobia Robineau-Desvoidy, 1830 (Diptera: Sarcophagidae: Miltogramminae) is completed using an integrated approach combining four molecular loci (three mitochondrial, COI, ND4 and CYTB; one nuclear, EF1α) and morphological data. A new species, Amobia (s. str.) serpenta sp. nov., endemic to Australia, is described, and Amobia auriceps (Baranov, 1935) and Amobia burnsi (Malloch, 1930) are re-described. Molecular data are used to reconstruct inter-specific and generic relationships and support morphological species hypotheses. Phylogenetic analysis places all three Australian Amobia species together with Amobia signata (Meigen, 1824) (a Palaearctic species) in a single clade sister to Senotainia Macquart, 1846 (in part), which is in agreement with previous phylogenetic studies of the Miltogramminae. In addition to the description of species and molecular phylogenetics, general host associations for the Australian species of Amobia are discussed and evidence for the synonymisation of A. pelopei (Rondani, 1859) and A. auriceps is refuted.

A revision of the Dwarf Geckos, genus Lygodactylus (Squamata: Gekkonidae), from Angola, with the description of three new species

Zootaxa ◽  
2020 ◽  
Vol 4853 (3) ◽  
pp. 301-352 ◽  
Author(s):  
MARIANA P. MARQUES ◽  
LUIS M. P. CERÍACO ◽  
MATTHEW D. BUEHLER ◽  
SUZANA A. BANDEIRA ◽  
JOYCE M. JANOTA ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Taxonomic Revision ◽  
Molecular Data ◽  
Morphological Data ◽  
Mitochondrial Marker ◽  
Number Of Species ◽  
Voucher Specimens ◽  
Morphological And Molecular Data ◽  
Three New Species

At present the genus Lygodactylus is represented by three species in Angola confirmed by voucher specimens—L. angolensis, L. bradfieldi, and L. capensis—and two others believed to be present, but without specimens with precise localities, L. chobiensis and L. lawrencei. We present a detailed taxonomic revision of the group in Angola and describe three new species, Lygodactylus baptistai sp. nov. L. nyaneka sp. nov. and Lygodactylus tchokwe sp. nov. Phylogenetic analysis using the mitochondrial marker ND2, as well as morphological data support the recognition of the new species. In addition, data suggest that specimens historically assigned to L. capensis in Angola represent misidentifications of L. nyaneka sp. nov. and L. tchokwe sp. nov. We revisit the identity of Lygodactylus laurae, a junior synonym of L. angolensis. We also present the first confirmed record of L. lawrencei in the country, using both morphological and molecular data. The description of the new species and the revision of the taxonomic identity of the Angolan populations of the genus, raises the number of species occurring in the country to five. A key to the Angolan species is presented. 

scholarly journals A revision of the genus Leontodon (Asteraceae) in the Azores based on morphological and molecular evidence

Phytotaxa ◽  
2015 ◽  
Vol 210 (1) ◽  
pp. 24 ◽  
Author(s):  
MÓNICA MOURA ◽  
LUÍS SILVA ◽  
ELISABETE F. DIAS ◽  
HANNO SCHAEFER ◽  
MARK CARINE
Keyword(s):  
Endemic Species ◽  
Taxonomic Revision ◽  
Its Region ◽  
Morphological Characters ◽  
Molecular Data ◽  
Morphological Data ◽  
Molecular Evidence ◽  
Azores Archipelago ◽  
Western Group ◽  
Group A

Two endemic species of Leontodon are currently recognized in the Azores archipelago: Leontodon filii and L. rigens. However, there has been confusion regarding the application of these names and field observations and herbarium studies suggested three morphotypes in the islands. Here, we present a taxonomic revision of the Azorean endemic Leontodon species using morphological characters and new molecular data from the ITS region and from three chloroplast regions: trnQ, trnV and matK. Fifty-one quantitative and qualitative morphological characters were examined that revealed consistent differences between specimens from the western, central and eastern subarchipelagos (where, on the latter, Leontodon is restricted to São Miguel). Molecular analysis revealed two well defined monophyletic groups, one comprising accessions from São Miguel and the second comprising accessions from the western group, while central group accessions were in an unresolved polytomy. Both analyses also indicated the occurrence of hybridization with L. saxatilis, a widespread non-endemic species. Taken together, molecular and morphological data suggest the reinstatement of a third Azorean Leontodon taxon endemic to the western group. A key to the Leontodon of the Azores and descriptions of the endemic taxa are provided.

Taxonomic revision of five species groups of ebracteate-erect Myosotis (Boraginaceae) endemic to New Zealand, based on morphology, and description of new subspecies

2021 ◽  
Author(s):  
Heidi M. Meudt
Keyword(s):  
New Zealand ◽  
Taxonomic Revision ◽  
Morphological Characters ◽  
Morphological Data ◽  
Natural Hybrid ◽  
The South ◽  
New Subspecies ◽  
Taxonomic Treatment ◽  
Species Groups

Macro-morphological data were analysed to assess the distinctiveness and revise the taxonomy of 14 species, varieties and tag-named taxa in five informal species groups of ebracteate-erect forget-me-nots endemic to New Zealand. The following nine species are recognised: Myosotis albosericea Hook.f., M. brockiei L.B.Moore & M.J.A.Simpson, M. capitata Hook.f., M. concinna Cheeseman, M. goyenii Petrie, M. laeta Cheeseman, M. monroi Cheeseman, M. rakiura L.B.Moore, and M. traversii Hook.f. Three species have two allopatric subspecies each in the South Island, distinguished by few, minor morphological characters, including Myosotis brockiei subsp. brockiei and M. brockiei subsp. dysis Courtney & Meudt subsp. nov., M. goyenii subsp. goyenii and M. goyenii subsp. infima Meudt & Heenan, and M. traversii subsp. cantabrica (L.B.Moore) Meudt comb. et stat. nov. and M. traversii subsp. traversii. Myosotis × cinerascens Petrie is hypothesised to be a rare natural hybrid involving M. traversii subsp. cantabrica and another species, possibly M. colensoi. Several vegetative and floral characteristics can distinguish the study taxa from one another and from other ebracteate-erect species. The nine species plus M. × cinerascens are included in the taxonomic treatment, and the key also includes other recently revised ebracteate-erect species.

Analysis of the differences between Syntormon pallipes and S. pseudospicatus (Diptera: Dolichopodidae): morphological and molecular data

2019 ◽  
Vol 28 (2) ◽  
pp. 305-316
Author(s):  
M.A. Chursina ◽  
I.Ya. Grichanov
Keyword(s):  
Dna Analysis ◽  
Distinct Species ◽  
Molecular Data ◽  
Wing Shape ◽  
Morphological Data ◽  
12S Rrna ◽  
Separate Species ◽  
Geometric Morphometric ◽  
Geometric Morphometric Analysis ◽  
Morphological And Molecular Data

The recent catalogues of the family Dolichopodidae considered Syntormon pallipes (Fabricius, 1794) and S. pseudospicatus Strobl, 1899 as separate species. In this study, we used three approaches to estimate the significance of differences between the two species: molecular analysis (COI and 12S rRNA sequences), analysis of leg colour characters and geometric morphometric analysis of wing shape. The morphological data confirmed the absence of significant differences between S. pallipes and S. pseudospicatus found in the DNA analysis. Significant differences in the wing shape of two species have not been revealed. Hence, according to our data, there is no reason to consider S. pseudospicatus as a distinct species.

scholarly journals Taxonomic revision of the South Asian River dolphins ( Platanista ): Indus and Ganges River dolphins are separate species

2021 ◽  
Author(s):  
Gill T. Braulik ◽  
Frederick I. Archer ◽  
Uzma Khan ◽  
Mohammad Imran ◽  
Ravindra K. Sinha ◽  
...  
Keyword(s):  
South Asian ◽  
Taxonomic Revision ◽  
Ganges River ◽  
The South ◽  
Separate Species
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