Intensification of Nickel Bioleaching with Neutrophilic Bacteria Guyparkeria halophila as an Approach to Limitation of Sulfuric Acid Pollution

Hydrometallurgical production of valuable and non-ferrous metals is traditionally accompanied with acid waste effluents/acid mine drainage leading to acidification of the mining areas. The traditional cause of this pollution is the well-known technology based on the recovery of metals with acid solutions and the application of strong acidophilic leaching bacteria for the oxidation of sulfide ores. In our experiments, we used neutrophilic autotrophic bacteria (NAB) stimulated with formic acid or coupled with acidophilic bacteria. The first approach was based on using formic acid as an energetic substrate by autotrophic bacteria. In the second case, the NAB provided initial biogenic acidification for the following growth of the inoculated acidophilic bacteria. Our experiments resulted in increased nickel recovery from the low-grade sulfide ores, which was provided by the NAB in a medium supplemented with formic acid. Bioleaching resulted in 1116 mg Ni/L (69.75%) in the medium with formate and only 35.4 mg Ni/L without formate in 43 days. As a whole, our bench scale experiments showed that the stimulated NAB can be effective at pH 7–5. Partially replacing sulfuric acid with formic acid could also give benefits via the following natural degradation of acid wastes. As a whole, this approach is more environmentally friendly than conventional bioleaching techniques.

Determinants of Copper Resistance in Acidithiobacillus Ferrivorans ACH Isolated from the Chilean Altiplano

The use of microorganisms in mining processes is a technology widely employed around the world. Leaching bacteria are characterized by having resistance mechanisms for several metals found in their acidic environments, some of which have been partially described in the Acidithiobacillus genus (mainly on ferrooxidans species). However, the response to copper has not been studied in the psychrotolerant Acidithiobacillus ferrivorans strains. Therefore, we propose to elucidate the response mechanisms of A. ferrivorans ACH to high copper concentrations (0–800 mM), describing its genetic repertoire and transcriptional regulation. Our results show that A. ferrivorans ACH can grow in up to 400 mM of copper. Moreover, we found the presence of several copper-related makers, belonging to cop and cus systems, as well as rusticyanins and periplasmatic acop protein in the genome. Interestingly, the ACH strain is the only one in which we find three copies of copB and copZ genes. Moreover, transcriptional expression showed an up-regulation response (acop, copZ, cusA, rusA, and rusB) to high copper concentrations. Finally, our results support the important role of these genes in A. ferrivorans copper stress resistance, promoting the use of the ACH strain in industrial leaching under low temperatures, which could decrease the activation times of oxidation processes and the energy costs.

Mechanism for the Bio-Oxidation and Decomposition of Pentlandite: Implication for Nickel Bioleaching at Elevated pH

This work investigated the effects of Fe3+, H+ and adsorbed leaching bacteria on the bioleaching of pentlandite. Collectively, an integrated model for the oxidation and decomposition of pentlandite was built to describe the behaviors of different components in a bioleaching system. Proton ions and ferric ions could promote the break and oxidation of Ni-S and Fe-S bonds. The iron-oxidizing microorganisms could regenerate ferric ions and maintain a high Eh value. The sulfur-oxidizing microorganisms showed significant importance in the oxidation of polysulfide and elemental sulfur. The atoms in pentlandite show different modification pathways during the bioleaching process: iron transformed through a (Ni,Fe)9S8 → Fe2+ → Fe3+ → KFe3(SO4)2(OH)6 pathway; nickel experienced a transformation of (Ni,Fe)9S8 → NiS → Ni2+; sulfur modified through the pathway of S2−/S22− → Sn2− → S0 → SO32− → SO42−. During bioleaching, a sulfur-rich layer and jarosite layer formed on the mineral surface, and the rise of pH value accelerated the process. However, no evidence for the inhibition of the layers was shown in the bioleaching of pentlandite at pH 3.00. This study provides a novel method for the extraction of nickel from pentlandite by bioleaching at elevated pH values.

Influence of Citrate on Metal Dissolution and Respiration Rate of Microbial Leaching Cultures

The application of acidophilic iron oxidizing bacteria is an established technique in tank and heap leaching of mainly sulfidic minerals. Even though bioleaching is broadly studied, there are still several issues to solve. Especially, the formation of iron precipitates, leading to co-precipitation of valuable metals, as well as the inhibition due to coating, considerably decrease the leaching efficiency. Consequently, the addition of chelating agents should result in an increased dissolution rate.However, organic acids, which have chelating characteristics, are generally regarded as highly toxic for leaching bacteria. Nonetheless, we found that both the addition of sodium citrate and citric acid leads to an increased iron oxidation rate of 42% and 84%, respectively, compared to standard culture medium without citrate. Chemical leaching tests with ZnS and ferric iron showed similar concentrations of dissolved zinc with and without citrate. However, the actual leaching efficiency is yet to be evaluated.

Biofilm Formation, Communication and Interactions of Mesophilic Leaching Bacteria during Pyrite Oxidation

A functional luxIR-type Quorum Sensing (QS) system is present in Acidithiobacillus ferrooxidans. However, cell-cell communication among various acidophilic chemolithoautotrophs growing on pyrite has not been studied in detail. These aspects are the scope of this study with emphasis on the effects exerted by the N-acyl-homoserine lactone (AHL) type signaling molecules which are produced by Acidithiobacillus ferrooxidans. Their effects on attachment and leaching efficiency by other leaching bacteria, such as Acidithiobacillus ferrivorans, Acidiferrobacter spp. SPIII/3 and Leptospirillum ferrooxidans in pure and mixed cultures growing on pyrite is shown.

Characterization of Biofilm Formation by the Bioleaching Acidophilic Bacterium Acidithiobacillus Ferrooxidans by a Microarray Transcriptome Analysis

Bioleaching is the extraction of metals, such as copper or gold, from ore by microorganisms. Bacterial attachment increases leaching activities due to the formation of a "reaction space" between the metal sulfide surface and the cell. This process depends on abiotic characteristics such as purity and degree of crystallization of the metal sulfide, as well as biotic ones such as the capacity of the bacteria for detecting favourable attachment sites and synthesizing a suitable cell envelope (EPS), for adhesion. Planktonic and sessile cells should differ significantly in their metabolic activities and therefore in their gene expression patterns. To help to understand At. ferrooxidans biofilm formation, microarray transcript profiling was carried out to compare planktonic and sessile cells. The high contents of EPS and ferric iron of the biofilms are interfering with RNA extraction, causing inhibition of DNAse, reverse transcriptase and/or polymerase activities required to get labelled target cDNA. In order to have sufficient high quality RNA suitable for transcriptomic analysis, we have optimized the biofilm formation of At. ferrooxidans on pyrite (FeS2) and the RNA extraction from the sessile cell population. DNA microarrays have been hybridized with labelled cDNAs from sessile and planktonic cells and preliminary data suggest that some genes are differently expressed between these two subpopulations. The understanding of these differences may help us to shift populations of leaching bacteria from the planktonic state towards the sessile state in order to influence bioleaching.