medical data mining
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Webology ◽  
2021 ◽  
Vol 18 (02) ◽  
pp. 441-452
Author(s):  
Jayakumar Sadhasivam ◽  
Senthil J ◽  
Ganesh R.M ◽  
Chellapan N

People have disorder of liver that require medical care at correct time. It is utmost important to find the disease before it elapse the curable stage. Significantly, much of understanding of organ development has arisen from analyses of patients with liver deficiencies. Data mining is beneficial to find the disease at early stage based on the factors that can be gathered by performing test on the patient. Nowadays, around 65 % of the population in India are eating junk foods which minimize the metabolism rate and effect liver in many ways. In recent years, liver disorders have excessively increased and are still considered to be life threatening because it has caused low survivability. Still the patients having liver diseases are increasing and the symptoms of the diseases are difficult to identify. The doctors often failed to identify the symptoms which can cause severe damages to the patient and it requires utmost attention. So, we are applying Medical Data Mining (MDM) for predicting the liver disease by using the historical data and understanding their patterns. Here we are using prediction model i.e. Support Vector Machine (SVM) to achieve the goal.


Author(s):  
Ravikumar J. ◽  
Ramakanth Kumar P.

To extract important concepts (named entities) from clinical notes, most widely used NLP task is named entity recognition (NER). It is found from the literature that several researchers have extensively used machine learning models for clinical NER.The most fundamental tasks among the medical data mining tasks are medical named entity recognition and normalization. Medical named entity recognition is different from general NER in various ways. Huge number of alternate spellings and synonyms create explosion of word vocabulary sizes. This reduces the medicine dictionary efficiency. Entities often consist of long sequences of tokens, making harder to detect boundaries exactly. The notes written by clinicians written notes are less structured and are in minimal grammatical form with cryptic short hand. Because of this, it poses challenges in named entity recognition. Generally, NER systems are either rule based or pattern based. The rules and patterns are not generalizable because of the diverse writing style of clinicians. The systems that use machine learning based approach to resolve these issues focus on choosing effective features for classifier building. In this work, machine learning based approach has been used to extract the clinical data in a required manner


Author(s):  
Khodke harish Eknath ◽  
Yadav S K ◽  
Kyatanavar D N

Information mining frameworks are exhaustively used in coronary affliction for affirmation and figure. As heart condition is that the essential clarification for death for individuals, recognizing confirmation . The work proposed is inductive type and needs deep analysis of the data to ensure the right predictions on the data sets provided. A sample dataset of patients for heart disease will be collected from repository. It involves the steps and procedure. The proposed research work can be carried out step by step to conclude it with the accurate results.


2020 ◽  
Author(s):  
Lin Yang ◽  
Si Zheng ◽  
Xiaowei Xu ◽  
Yueping Sun ◽  
Xuwen Wang ◽  
...  

BACKGROUND Medical postgraduates’ demand for data capabilities is growing, as biomedical research becomes more data driven, integrative, and computational. In the context of the application of big data in health and medicine, the integration of data mining skills into postgraduate medical education becomes important. OBJECTIVE This study aimed to demonstrate the design and implementation of a medical data mining course for medical postgraduates with diverse backgrounds in a medical school. METHODS We developed a medical data mining course called “Practical Techniques of Medical Data Mining” for postgraduate medical education and taught the course online at Peking Union Medical College (PUMC). To identify the background knowledge, programming skills, and expectations of targeted learners, we conducted a web-based questionnaire survey. After determining the instructional methods to be used in the course, three technical platforms—Rain Classroom, Tencent Meeting, and WeChat—were chosen for online teaching. A medical data mining platform called Medical Data Mining - R Programming Hub (MedHub) was developed for self-learning, which could support the development and comprehensive testing of data mining algorithms. Finally, we carried out a postcourse survey and a case study to demonstrate that our online course could accommodate a diverse group of medical students with a wide range of academic backgrounds and programming experience. RESULTS In total, 200 postgraduates from 30 disciplines participated in the precourse survey. Based on the analysis of students’ characteristics and expectations, we designed an optimized course structured into nine logical teaching units (one 4-hour unit per week for 9 weeks). The course covered basic knowledge of R programming, machine learning models, clinical data mining, and omics data mining, among other topics, as well as diversified health care analysis scenarios. Finally, this 9-week course was successfully implemented in an online format from May to July in the spring semester of 2020 at PUMC. A total of 6 faculty members and 317 students participated in the course. Postcourse survey data showed that our course was considered to be very practical (83/83, 100% indicated “very positive” or “positive”), and MedHub received the best feedback, both in function (80/83, 96% chose “satisfied”) and teaching effect (80/83, 96% chose “satisfied”). The case study showed that our course was able to fill the gap between student expectations and learning outcomes. CONCLUSIONS We developed content for a data mining course, with online instructional methods to accommodate the diversified characteristics of students. Our optimized course could improve the data mining skills of medical students with a wide range of academic backgrounds and programming experience.


2020 ◽  
Author(s):  
Huanhuan Wang ◽  
Xiang Wu ◽  
Yongqi Tan ◽  
Hongsheng Yin ◽  
Xiaochun Cheng ◽  
...  

BACKGROUND Medical data mining and sharing is an important process to realize the value of medical big data in E-Health applications. However, medical data contains a large amount of personal private information of patients, there is a risk of privacy disclosure when sharing and mining. Therefore, how to ensure the security of medical big data in the process of publishing, sharing and mining has become the focus of current researches. OBJECTIVE The objective of our study is to design a framework based on differential privacy protection mechanism to ensure the security sharing of medical data. We developed a privacy Protection Query Language (PQL) that can integrate multiple machine mining methods and provide secure sharing functions for medical data. METHODS This paper adopts a modular design method with three sub-modules, including parsing module, mining module and noising module. Each module encapsulates different computing devices, such as composite parser, noise jammer, etc. In the PQL framework, we apply the differential privacy mechanism to the results of the module collaborative calculation to optimize the security of various mining algorithms. These computing devices operate independently, but the mining results depend on their cooperation. RESULTS Designed and developed a query language framework that provides medical data mining, sharing and privacy preserving functions. We theoretically proved the performance of the PQL framework. The experimental results showed that the PQL framework can ensure the security of each mining result, and the average usefulness of the output results is above 97%. CONCLUSIONS We presented a security framework that enables medical data providers to securely share the health data or treatment data, and developed a usable query language based on differential privacy mechanism that enables researchers to mine potential information securely using data mining algorithms. CLINICALTRIAL


Medicine ◽  
2020 ◽  
Vol 99 (22) ◽  
pp. e20338 ◽  
Author(s):  
Yuanzhang Hu ◽  
Zeyun Yu ◽  
Xiaoen Cheng ◽  
Yue Luo ◽  
Chuanbiao Wen

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