ionic interaction
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Molecules ◽  
2021 ◽  
Vol 27 (1) ◽  
pp. 151
Author(s):  
Karol Wtorek ◽  
Piotr F. J. Lipiński ◽  
Anna Adamska-Bartłomiejczyk ◽  
Justyna Piekielna-Ciesielska ◽  
Jarosław Sukiennik ◽  
...  

Our formerly described pentapeptide opioid analog Tyr-c[D-Lys-Phe-Phe-Asp]NH2 (designated RP-170), showing high affinity for the mu (MOR) and kappa (KOR) opioid receptors, was much more stable than endomorphine-2 (EM-2) in the rat brain homogenate and displayed remarkable antinociceptive activity after central (intracerebroventricular) and peripheral (intravenous) administration. In this report, we describe the further modification of this analog, which includes the incorporation of a β3-amino acid, (R)- and (S)-β3-Lys, instead of D-Lys in position 2. The influence of such replacement on the biological properties of the obtained analogs, Tyr-c[(R)-β3-Lys-Phe-Phe-Asp]NH2 (RP-171) and Tyr-c[(S)-β3-Lys-Phe-Phe-Asp]NH2, (RP-172), was investigated in vitro. Receptor radiolabeled displacement and functional calcium mobilization assays were performed to measure binding affinity and receptor activation of the new analogs. The obtained data revealed that only one of the diastereoisomeric peptides, RP-171, was able to selectively bind and activate MOR. Molecular modeling (docking and molecular dynamics (MD) simulations) suggests that both compounds should be accommodated in the MOR binding site. However, in the case of the inactive isomer RP-172, fewer hydrogen bonds, as well as instability of the canonical ionic interaction to Asp147, could explain its very low MOR affinity.


Thyroid ◽  
2021 ◽  
Author(s):  
Carlos Eduardo Bernal Barquero ◽  
Mariano Martín ◽  
Romina Celeste Geysels ◽  
Victoria Peyret ◽  
Patricia Papendieck ◽  
...  

Biochemistry ◽  
2021 ◽  
Author(s):  
Tasha B. Toro ◽  
Jordan S. Swanier ◽  
Jada A. Bezue ◽  
Christian G. Broussard ◽  
Terry J. Watt

Viruses ◽  
2021 ◽  
Vol 13 (7) ◽  
pp. 1374
Author(s):  
Chathura D. Suraweera ◽  
Mark G. Hinds ◽  
Marc Kvansakul

Numerous viruses have evolved sophisticated countermeasures to hijack the early programmed cell death of host cells in response to infection, including the use of proteins homologous in sequence or structure to Bcl-2. Orf virus, a member of the parapoxviridae, encodes for the Bcl-2 homolog ORFV125, a potent inhibitor of Bcl-2-mediated apoptosis in the host. ORFV125 acts by directly engaging host proapoptotic Bcl-2 proteins including Bak and Bax as well as the BH3-only proteins Hrk and Puma. Here, we determined the crystal structures of ORFV125 bound to the BH3 motif of proapoptotic proteins Puma and Hrk. The structures reveal that ORFV125 engages proapoptotic BH3 motif peptides using the canonical ligand binding groove. An Arg located in the structurally equivalent BH1 region of ORFV125 forms an ionic interaction with the conserved Asp in the BH3 motif in a manner that mimics the canonical ionic interaction seen in host Bcl-2:BH3 motif complexes. These findings provide a structural basis for Orf virus-mediated inhibition of host cell apoptosis and reveal the flexibility of virus encoded Bcl-2 proteins to mimic key interactions from endogenous host signalling pathways.


2021 ◽  
Vol 71 (1) ◽  
pp. 115-130
Author(s):  
Nizar A. Al-Shar’i ◽  
Qosay A. Al-Balas ◽  
Mohammad A. Hassan ◽  
Tamam M. El-Elimat ◽  
Ghazi A. Aljabal ◽  
...  

AbstractThe glyoxalase system, particularly glyoxalase-I (GLO-I), has been approved as a potential target for cancer treatment. In this study, a set of structurally diverse polyphenolic natural compounds were investigated as potential GLO-I inhibitors. Ellagic acid was found, computationally and experimentally, to be the most potent GLO-I inhibitor among the tested compounds which showed an IC50 of 0.71 mmol L−1. Its binding to the GLO-I active site seemed to be mainly driven by ionic interaction via its ionized hydroxyl groups with the central Zn ion and Lys156, along with other numerous hydrogen bonding and hydrophobic interactions. Due to its unique and rigid skeleton, it can be utilized to search for other novel and potent GLO-I inhibitors via computational approaches such as pharmacophore modeling and similarity search methods. Moreover, an inspection of the docked poses of the tested compounds showed that chlorogenic acid and dihydrocaffeic acid could be considered as lead compounds worthy of further optimization.


Polymers ◽  
2021 ◽  
Vol 13 (3) ◽  
pp. 326 ◽  
Author(s):  
Junpeng Xu ◽  
Chih-Yu Fu ◽  
Yu-Liang Tsai ◽  
Chui-Wei Wong ◽  
Shan-hui Hsu

Conductive thin films have great potential for application in the biomedical field. Herein, we designed thermoresponsive and conductive thin films with hydrophilicity, strain sensing, and biocompatibility. The crosslinked dense thin films were synthesized and prepared through a Schiff base reaction and ionic interaction from dialdehyde polyurethane, N-carboxyethyl chitosan, and double-bonded chitosan grafted polypyrrole. The thin films were air-dried under room temperature. These thin films showed hydrophilicity and conductivity (above 2.50 mS/cm) as well as responsiveness to the deformation. The tensile break strength (9.72 MPa to 15.07 MPa) and tensile elongation (5.76% to 12.77%) of conductive thin films were enhanced by heating them from 25 °C to 50 °C. In addition, neural stem cells cultured on the conductive thin films showed cell clustering, proliferation, and differentiation. The application of the materials as a conductive surface coating was verified by different coating strategies. The conductive thin films are potential candidates for surface modification and biocompatible polymer coating.


2021 ◽  
Author(s):  
Yan Peng ◽  
Yujia Hou ◽  
Qi Wu ◽  
Qichao Ran ◽  
Guangsu Huang ◽  
...  

Biological tissues can grow stronger after damage and self-healing. However, artificial self-healing materials usually show decreased mechanical properties after repairing. Here, we develop a self-healing strengthening elastomers (SSEs) by engineering...


2021 ◽  
Author(s):  
Yifeng Ni ◽  
Dong Zhang ◽  
Jingfeng Yuan ◽  
Shuguang Wang ◽  
Lingbing Che ◽  
...  
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