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2021 ◽  
Vol 31 (2) ◽  
pp. 293-313
Author(s):  
Ali Gholami Rudi ◽  

For a map that can be rotated, we consider the following problem. There are a number of feature points on the map, each having a geometric object as a label. The goal is to find the largest subset of these labels such that when the map is rotated and the labels remain vertical, no two labels in the subset intersect. We show that, even if the labels are vertical bars of zero width, this problem remains NP-hard, and present a polynomial approximation scheme for solving it. We also introduce a new variant of the problem for vertical labels of zero width, in which any label that does not appear in the output must be coalesced with a label that does. Coalescing a subset of the labels means to choose a representative among them and set its label height to the sum of the individual label heights.


2021 ◽  
Author(s):  
Chenxu Wang ◽  
Jia Xu ◽  
Thomas D. Kocher ◽  
Minghui Li ◽  
Deshou Wang

Premelanosome protein (pmel) is a key gene for melanogenesis in vertebrates. Mutations in this gene are responsible for white plumage in chicken, but its role in pigmentation of fish remains to be demonstrated. In this study we found that most fishes have two pmel genes arising from the teleost-specific whole genome duplication. Both pmela and pmelb were expressed at high levels in the eyes and skin of Nile tilapia. We mutated both genes in tilapia using CRISPR/Cas9 gene editing. Homozygous mutation of pmela resulted in yellowish body color with weak vertical bars and a hypo-pigmented retinal pigment epithelium (RPE) due to significantly reduced number and size of melanophores. In contrast, we observed an increased number and size of xanthophores in mutants compared to wild-type fish. Homozygous mutation of pmelb resulted in a similar, but milder phenotype than pmela -/- mutants, without effects on RPE pigmentation. Double mutation of pmela and pmelb resulted in loss of additional melanophores compared to the pmela -/- mutants, and also an increase in the number and size of xanthophores, producing a strong golden body color without bars in the trunk. The RPE pigmentation of pmela -/ - ;pmelb -/- was similar to pmela -/- mutants, with much less pigmentation than pmelb -/- mutants and wild-type fish. Taken together, our results indicate that, while both pmel genes are important for the formation of body color in tilapia, pmela plays a more important role than pmelb. To our knowledge, this is the first report on mutation of pmelb or both pmela;pmelb in fish. Studies on these mutants suggest new strategies for breeding golden tilapia, and also provide a new model for studies of pmel function in vertebrates.


Biology Open ◽  
2021 ◽  
Vol 10 (9) ◽  
Author(s):  
Braedan M. McCluskey ◽  
Yipeng Liang ◽  
Victor M. Lewis ◽  
Larissa B. Patterson ◽  
David M. Parichy

ABSTRACT Molecular and cellular mechanisms underlying variation in adult form remain largely unknown. Adult pigment patterns of fishes in the genus Danio, which includes zebrafish, Danio rerio, consist of horizontal stripes, vertical bars, spots and uniform patterns, and provide an outstanding opportunity to identify causes of species level variation in a neural crest derived trait. Understanding pigment pattern variation requires quantitative approaches to assess phenotypes, yet such methods have been mostly lacking for pigment patterns. We introduce metrics derived from information theory that describe patterns and pattern variation in Danio fishes. We find that these metrics used singly and in multivariate combinations are suitable for distinguishing general pattern types, and can reveal even subtle phenotypic differences attributable to mutations. Our study provides new tools for analyzing pigment pattern in Danio and potentially other groups, and sets the stage for future analyses of pattern morphospace and its mechanistic underpinnings.


Author(s):  
Dr. Eng. Guillaume Hervé POH’SIE* ◽  
◽  
Eng. Davy Marcel Bile Bile Abessolo ◽  
Eng. Giuseppe Cardillo ◽  
Prof. Carmelo Majorana ◽  
...  

The principal objective for this work was to extend the field of application of FEM to space frame beam-column connections under static loading and with lateral displacements. A four-storey building was modelled under static load condition. Horizontal and vertical structural elements were designed according to Eurocode 2. In order to understand the behavior of the external node made by under column, two beam and upper column, two models using correct boundary condition and nonlinear behavior of materials have been done using Abaqus Software The analysis was performed on an interior and an exterior joint models each in two conditions: unconfined and confined joint varying the distributions of number of stirrups for the beam reinforcement and the column reinforcement .A sup structural model to submit to numerical analysis have been performed, the Concrete Damage Plasticity model (CDPM) has been chosen for fit the nonlinear behavior for the concrete and the elastoplastic model has been adopted for the nonlinear behavior for the reinforcement (stirrups, longitudinal and vertical bars). The models were then verified against already existing and validated analytical results and results of experiments conducted on specimens.


2021 ◽  
Vol 61 ◽  
pp. e20216156
Author(s):  
Flávio A. Bockmann ◽  
Roberto E. Reis

Two new species of heptapterid catfish genus Cetopsorhamdia are described from close localities in western Brazil, at Chapada dos Parecis, an area with extremely high level of endemism. One species is from the upper Rio Madeira system, Rondônia State, and the other from the upper Rio Tapajós system, Mato Grosso State. The two species are diagnosed, among several other features, by their markedly distinctive color patterns, with the former having well-defined quadrangular marks in trunk flanks while the latter bearing irregular, vertical bars along the trunk. The monophyly of Cetopsorhamdia is discussed, with two putative synapomorphies being proposed to support the genus. Potentially informative morphological characters to resolve the internal relationships of the genus are presented and discussed. Despite the striking external differences between the two species herein described, they are found to likely form a clade.


2021 ◽  
Author(s):  
Braedan M McCluskey ◽  
Yipeng Liang ◽  
Victor M Lewis ◽  
Larissa B Patterson ◽  
David M Parichy

Molecular and cellular mechanisms underlying differences in adult form remain largely unknown. Adult pigment patterns of fishes in the genus Danio, which includes zebrafish, D. rerio, include horizontal stripes, vertical bars, spots and uniform patterns, and provide an outstanding opportunity to identify causes of species level variation in a neural crest derived trait. Yet understanding such variation requires quantitative approaches to assess phenotypes, and such methods have been mostly lacking for pigment patterns. We introduce metrics derived from information theory that describe patterns and pattern variation in Danio fishes. We find that such metrics used singly and in multivariate combinations are suitable for distinguishing general pattern types, and can reveal even subtle phenotypic differences attributable to mutations. Our study provides new tools for analyzing pigment pattern in Danio and potentially other groups, and sets the stage for future analyses of pattern morphospace and its mechanistic underpinnings.


2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Cheng Yang ◽  
Wanshu Huang ◽  
Ying Cui ◽  
Guanrong Zhang ◽  
Dongmei Wang ◽  
...  

Abstract Background To observe the characteristics of binocular integration and stereopsis in children with television torticollis. Methods A retrospective study was carried out, where data were collected from 25 children with television torticollis as the disease group after refractive error correction and 25 normal children as the control group. A virtual reality system was used to assess and analyze the characteristics of binocular integration by a contrast balance test and binocular stereopsis. Results The 25 children in the disease group included 17 males and 8 females with an average age of 7.5 ± 1.9 years old and an average binocular spherical equivalent of − 0.35 ± 1.46D. The 25 children in the control group were also 17 males and 8 females with an average age of 7.3 ± 2.2 years old and the average binocular spherical equivalent of − 0.48 ± 0.93D. No significant differences were found in the horizontal bar contrast balance test between the 2 groups at near and far distances. Near-distance vertical bar contrast balance test was normal in 23 subjects and suppressed in 2 subjects in the control group, while it was normal in 13 subjects and suppressed in 12 subjects in the disease group, which showed a statistically significant difference (P = 0.002). Far distance vertical bar contrast balance test was normal in 24 subjects and suppressed in 1 subject in the control group, normal in 7 subjects and suppressed in 18 subjects in the disease group, showing a statistically significant difference (P = 0.000). All subjects in the 2 groups showed 100〞 as near distance stereoacuity. At far distance, the mean stereoacuity was 176.00〞 ± 92.56〞 in the control group, and 352.00〞 ± 270.99〞 in the disease group, with a statistically significant difference (P = 0.011). Conclusion By using virtual reality technology, defects in binocular visual function were found in children whose television torticollis persisted after regular refractive error correction. Television torticollis may be associated with the deficit of binocular integration for vertical bars and far distance stereopsis.


2021 ◽  
Vol 8 (1) ◽  
pp. e144
Author(s):  
Matthew K. LeFauve ◽  
Cassie J. Rowe ◽  
Mikayla Crowley-Perry ◽  
Jenna L. Wiegand ◽  
Arthur G. Shapiro ◽  
...  

We describe a visual stimulus that can be used with both larval and adult zebrafish (Danio rerio). This protocol is a modification of a standard visual behavior analysis, the optomotor response (OMR). The OMR is often used to determine the spatial response or to detect directional visuomotor deficiencies. An OMR can be generated using a high contrast grated pattern, typically vertical bars. The spatial sensitivity is measured by detection and response to a change in grating bar width and is reported in cycles per degree (CPD). This test has been used extensively with zebrafish larvae and adults to identify visual- and/or motor-based mutations. Historically, when tested in adults, the grated pattern was presented from a vertical perspective, using a rotating cylinder around a holding tank, allowing the grating to be seen solely from the sides and front of the organism. In contrast, OMRs in zebrafish larvae are elicited using a stimulus projected below the fish. This difference in methodology means that two different experimental set-ups are required: one for adults and one for larvae. Our visual stimulus modifies the stimulation format so that a single OMR stimulus, suitable for use with both adults and larvae, is being presented underneath the fish. Analysis of visuomotor responses using this method does not require costly behavioral tracking software and, using a single behavioral paradigm, allows the observer to rapidly determine visual spatial response in both zebrafish larvae and adults.


2021 ◽  
Vol 19 (2) ◽  
Author(s):  
Marcelo R. S. Melo ◽  
Bárbara B. Bouquerel ◽  
Flávia T. Masumoto ◽  
Rayane S. França ◽  
André L. Netto-Ferreira

Abstract A new species of Characidium is described from the tributaries of the rio Tocantinzinho, rio Tocantins basin, located in the southern portion of the Chapada dos Veadeiros, at about 1,200 meters of elevation, Goiás, Brazil. The new species can be diagnosed by an unusual combination of two apomorphic features present in distinct clades of Characidium, the presence of a scaleless isthmus in allied to with a single row of dentary teeth. Additionally, the new species has a unique color pattern of inconspicuous vertical bars disconnected from the dorsal midline, forming seven to nine square blotches along body sides, and the presence of a dark saddle-shaped mark at the dorsal-fin base. Osteologically, it can be diagnosed by having the first and second anal-fin proximal radials fused and contacting the third hemal spine, which is branched. The new species also has a peculiar, unusual variation of fin-ray counts among its congeners.


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