Influence of urbanization on stream fish assemblages in three microbasins in the Upper Paraná River Basin

The colonization pattern of fish assemblages in streams is often studied in the context of environmental filters. On the other hand, when fish assemblages are subjected to anthropogenic effects, variables associated with environmental quality assume more importance. Therefore, this work evaluated the richness and composition of fish from streams sampled at different urbanization levels, aiming to determine any direct effects on the structure of fish assemblages. To accomplish this, samples were collected from 2003 to 2011 at 31 sites distributed among 3 microbasins in the Rio Ivinhema Basin, Alto Rio Paraná. Based on environmental variables, physicochemical of the water and analysis of the use and occupation of the soil, the microbasins were classified into different urbanization levels (low, medium and high). A total of 4,320 individuals were sampled, out of which 57 fish species were recorded. Sampled sites with medium urbanization level presented higher richness compared to sampled sites with high urbanization level which presented lower richness. Species richness in these sites was explained mainly by water temperature and water velocity. Results confirmed that urbanization does directly affect environmental integrity, which, in turn, can lead to the homogenization of stream assemblages.

Interactions between xylem traits linked to hydraulics during xylem development optimize growth performance in conifer seedlings

Climate change has threatened forests globally, challenging tree species ability to track the rapidly changing environment (e..g., drought and temperature rise). Conifer species face strong environmental filters due to climatic seasonality. Investigating how conifers change their hydraulic architecture during xylem development across the season may shed light on possible mechanisms underlying hydraulic adaptation in conifers. Laser microscopy was used to assess the three-dimensional hydraulic architecture of balsam fir (Abies balsamea (Linnaeus) Miller), jack pine (Pinus banksiana Lambert), white spruce (Picea glauca (Moench) Voss), and black spruce (Picea mariana (Miller) Britton, Sterns & Poggenburgh) seedlings. We measured hydraulic-related xylem traits from early to latewood, during four years of plant growth. The xylem development of jack pine seedlings contrasts with the other species for keeping torus overlap (a hydraulic safety-associated xylem trait), relatively constant across the season (from early to latewood) and the years. The tracheids and torus expansion are positively associated with plant growth. Pit aperture-torus covariance is central to the seasonal dynamics of jack pine xylem development, which jointly with a rapid tracheid and pit expansion seems to boost its growth performance. Linking xylem structural changes during xylem development with hydraulics is a major issue for future research to assess conifers vulnerability to climate change.

Biotic and Abiotic Interactions Shape Seed Germination of a Fire-Prone Species

Both biotic and abiotic environmental filters drive the occurrence, distribution, and persistence of plant species. Amongst drivers that influence the distribution of plants in harsh environments, seed predation and temperature are particularly important in habitats that are prone to fire. In this study, we highlight the combined effects of predation and high temperature simulating fire to understand its effects on the germination percentage and germination speed of the fire prone species Copaifera oblongifolia. Groups of seeds attacked by the beetles Rhinochenus brevicollis and Apion sp., seeds manipulated by the ant Atta laevigata, and seeds left intact were put to germinate in controlled environments. To evaluate the effects of abiotic filters, seeds with intact elaiosomes and seeds with elaiosomes removed by the ant Atta laevigata were exposed to temperatures of 27, 60, 100, and 200 °C. The results showed that only 2.8% of the seeds attacked by R. brevicollis germinated. Seeds attacked by Apion sp. germinated faster, followed by seeds with their elaiosomes removed and seeds with intact elaiosomes. Seeds attacked by Apion sp. had the lowest germination percentage. The temperature of 200 °C killed seed embryos, whereas seeds exposed to 100 °C took longer to germinate than seeds exposed to other temperatures. Our results reveal that fire intensity and seed damage are important drivers of seed germination of C. oblongifolia.

A Framework for Community Ecology

This book addresses an important problem in ecology: how are communities assembled from species pools? This pressing question underlies a broad array of practical problems in ecology and environmental science, including restoration of damaged landscapes, management of protected areas, and protection of threatened species. This book presents a simple logical structure for ecological assembly and addresses key areas including species pools, traits, environmental filters, and functional groups. It demonstrates the use of two predictive models (CATS and Traitspace) and consists of many wide-ranging examples including plants in deserts, wetlands, and forests, and communities of fish, amphibians, birds, mammals, and fungi. Global in scope, this volume ranges from the arid lands of North Africa, to forests in the Himalayas, to Amazonian floodplains. There is a strong focus on applications, particularly the twin challenges of conserving biodiversity and understanding community responses to climate change.

The interplay of spatial scale and landscape transformation modulates the abundance and intraspecific variation in the ecomorphological traits of a phyllostomid bat

Land use intensification imposes selective pressures that systematically change the frequency of wild population phenotypes. Growing evidence is biased towards the comparison of populations from discrete categories of land uses, ignoring the role of landscape emerging properties on the phenotype selection of wild fauna. Across the largest urban–rural gradient of the Colombian Orinoquia, we measured ecomorphological traits of 216 individuals of the flat-faced fruit-eating bat Artibeus planirostris. We did this to evaluate the scale of effect at which landscape transformation better predicts changes in phenotype and abundance of an urban-tolerant species. Forest percentage at 1.25 km was the main predictor affecting negatively bat abundance and positively its wing aspect ratio and body mass. Landscape variables affected forearm length at all spatial scales, this effect appeared to be sex-dependent, and the most important predictor, forest percentage at 0.5 km, had a negative effect on this trait. Our results indicate that landscape elements and spatial scale interact to shape ecomorphological traits and the abundance of A. planirostris. Interestingly, the scale of effect coincided at 1.25 km among all biological responses, suggesting that species’ abundance can be linked to the variation on phenotype under different environmental filters across landscape scenarios.

How regional climate and seed traits interact in shaping stress–tolerance of savanna seeds?

Functional traits related to regeneration responses to the environment are highly determinants of distribution patterns of plant communities. A large body of studies on seed traits suggests that regional climate may act as a strong filter of plant recruitment; however, few studies have evaluated the relative importance of seed traits and environmental filters for seed persistence at the population level. We tested the role of seed mass, water content and desiccation tolerance, as well as the germination time as proxies for seed tolerance to environmental filters (water deficit, heat shock and high temperatures) by comparing the response of tree species co-occurring in savannas located in different regions: Cerrado biome of Central Brazil and the Rio Branco savannas of northern Brazil. Seeds collected in savannas of Rio Branco showed a higher tolerance to environmental filters than those collected in savannas of the Cerrado. While the germination percentages largely varied in response to the treatments, the germination times were virtually unaffected by them, irrespective of seed origin, seed mass and water content. At the population level, the regional environment was a key determinant of seed tolerance to stress, irrespective of seed traits. Germination time was shown to represent a conservative seed trait and more linked to a species-specific germination strategy than to regional characteristics. Our results suggest that recruitment patterns of Cerrado savannas may be more impacted than Rio Branco savannas by the climate scenarios predicted for the future.

Metagenomic analysis of Raphidiopsis raciborskii microbiome: beyond the individual

Raphidiopsis raciborskii is a toxic, invasive bacteria with a defined biogeographic pattern attributed to the generation of ecotypes subjected to local environmental filters and to phenotypic plasticity. The interactions taking place between the cyanobacterium and the other bacteria inhabiting the external polysaccharide-rich matrix surrounding the cells, or phycosphere, may be ecotype-specific and would have different influence on the carbon and nutrient cycling in the ecosystem. Here, we describe the bacterial community or microbiome (assessed by 16S rRNA metagenomics) associated to two R. raciborskii strains that have been described as different ecotypes: the saxitoxin-producer MVCC19 and the non-toxic LB2897. Our results showed that both ecotypes share 50% of their microbiomes and differ in their dominant taxa. The taxon having the highest abundance in the microbiome of MVCC19 was Neorhizobium (22.5% relative abundance), while the dominant taxon in LB2897 was the Planctomycetes SM1A02 (26.2% relative abundance). These groups exhibit different metabolic capabilities regarding nitrogen acquisition (symbiotic nitrogen-fixing in Neorhizobium vs. anammox in SM1A02), suggesting the existence of ecotype-specific microbiomes that play a relevant role in cyanobacterial niche-adaptation. In addition, as saxitoxin and analogues are nitrogen-rich (7 atoms per molecule), we hypothesise that saxitoxin-producing R. raciborskii benefits from external sources of nitrogen provided by the microbiome bacteria. Based on these findings, we propose that the mechanisms involved in the assembly of the cyanobacterial microbiome community are ecotype-dependent.