structural similarity index
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Author(s):  
Sushma Tumkur Venugopal ◽  
Sriraam Natarajan ◽  
Megha P. Arakeri ◽  
Suresh Seshadri

Fetal Echocardiography is used for monitoring the fetal heart and for detection of Congenital Heart Disease (CHD). It is well known that fetal cardiac four chamber view has been widely used for preliminary examination for the detection of CHD. The end diastole frame is generally used for the analysis of the fetal cardiac chambers which is manually picked by the clinician during examination/screening. This method is subjected to intra and inter observer errors and also time consuming. The proposed study aims to automate this process by determining the frame, referred to as the Master frame from the cine loop sequences that can be used for the analysis of the fetal heart chambers instead of the clinically chosen diastole frame. The proposed framework determines the correlation between the reference (first) frame with the successive frames to identify one cardiac cycle. Then the Master frame is formed by superimposing all the frames belonging to one cardiac cycle. The master frame is then compared with the clinically chosen diastole frame in terms of fidelity metrics such as Dice coefficient, Hausdorff distance, mean square error and structural similarity index. The average value of the fidelity metrics considering the dataset used for this study 0.73 for Dice, 13.94 for Hausdorff distance, 0.99 for Structural Similarity Index and 0.035 for mean square error confirms the suitability of the proposed master frame extraction thereby avoiding manual intervention by the clinician. .


Biosensors ◽  
2021 ◽  
Vol 11 (12) ◽  
pp. 504
Author(s):  
Vicky Mudeng ◽  
Minseok Kim ◽  
Se-woon Choe

Diffuse optical tomography is emerging as a non-invasive optical modality used to evaluate tissue information by obtaining the optical properties’ distribution. Two procedures are performed to produce reconstructed absorption and reduced scattering images, which provide structural information that can be used to locate inclusions within tissues with the assistance of a known light intensity around the boundary. These methods are referred to as a forward problem and an inverse solution. Once the reconstructed image is obtained, a subjective measurement is used as the conventional way to assess the image. Hence, in this study, we developed an algorithm designed to numerically assess reconstructed images to identify inclusions using the structural similarity (SSIM) index. We compared four SSIM algorithms with 168 simulated reconstructed images involving the same inclusion position with different contrast ratios and inclusion sizes. A multiscale, improved SSIM containing a sharpness parameter (MS-ISSIM-S) was proposed to represent the potential evaluation compared with the human visible perception. The results indicated that the proposed MS-ISSIM-S is suitable for human visual perception by demonstrating a reduction of similarity score related to various contrasts with a similar size of inclusion; thus, this metric is promising for the objective numerical assessment of diffuse, optically reconstructed images.


2021 ◽  
pp. 1-16
Author(s):  
G. Rajeswari ◽  
P. Ithaya Rani

Facial occlusions like sunglasses, masks, caps etc. have severe consequences when reconstructing the partially occluded regions of a facial picture. This paper proposes a novel hybrid machine learning approach for occlusion removal based on Structural Similarity Index Measure (SSIM) and Principal Component Analysis (PCA), called SSIM_PCA. The proposed system comprises two stages. In the first stage, a Face Similar Matrix (FSM) guided by the Structural Similarity Index Measure is generated to provide the necessary information to recover from the lost regions of the face image. The FSM generates Related Face (RF) images similar to the probe image. In the second stage, these RF images are considered as related information and used as input data to generate eigenspaces using PCA to reconstruct the occluded face region exploiting the relationship between the occluded region and related face images, which contain relevant data to recover from the occluded area. Experimental results with three standard datasets viz. Caspeal-R1, IMFDB, and FEI have proven that the proposed method works well under illumination changes and occlusion of facial images.


2021 ◽  
Vol 2127 (1) ◽  
pp. 012022
Author(s):  
Y S Bekhtin ◽  
K M Vorobyev

Abstract The proposed compression method is based on the application of a two-dimensional discrete fast wavelet transform (FWT) to planar scans of 3D ultrasound images in order to simultaneously reduce redundancy and suppress speckle at a fixed quota of bits. The main idea of the method is to fuse three rules for threshold processing the wavelet coefficients of the scans, uniform and non-uniform quantizers, and bit quota distributions over subbands of the scan FWT based on the proposed cost function. The simulation results have shown that at the encoding rate of up to 1 bit/pixel, the quantity of artefacts were decreased up to 5-7 % of the original quantity under a signal-to-speckle ratio more than 16 dB, and the structural similarity index (SSIM) increased to 0.94-0.97 for defects of rectangular, triangular and oval shapes. The paper also presents the results proving the effectiveness of the proposed method in comparison with some variants of the solution according to the scheme “pre-filtering + codec”.


2021 ◽  
Vol 2070 (1) ◽  
pp. 012139
Author(s):  
V MNSSVKR Gupta ◽  
KVSS Murthy ◽  
R Shiva Shankar

Abstract Image denoising is essential to extract the information contained in an image without errors. A technique of using both wavelets and evolutionary computing tools is proposed to denoise and to improve the image quality. An adaptive thresholding-based wavelet denoising technique in the threshold function is coordinated by novel social group optimization (SGO) and accelerated particle swarm optimization (APSO) is proposed. The simulation oriented experimentation is taken out employing MATLAB and the analysis is carried out using the image property metrics similar to peak signal to noise ratio (PSNR), mean square error (MSE) and other structural similarity index metrics (SSIM).


Stroke ◽  
2021 ◽  
Author(s):  
Girish Bathla ◽  
Yanan Liu ◽  
Honghai Zhang ◽  
Milan Sonka ◽  
Colin Derdeyn

Background and Purpose: We explored the feasibility of automated, arterial input function independent, vendor neutral prediction of core infarct, and penumbral tissue using complete and partial computed tomographic perfusion data sets through neural networks. Methods: Using retrospective computed tomographic perfusion data from 57 patients, split as training/validation (60%/40%), we developed and validated separate 2-dimensional U-net models for cerebral blood flow (CBF) and time to maximum (Tmax) maps calculation to predict core infarct and tissue at risk, respectively. Once trained, the full sets of 28 input images were sequentially reduced to equitemporal 14, 10, and 7 time points. The averaged structural similarity index measure between the model-derived images and ground truth perfusion maps was compared. Volumes for core infarct and Tmax were compared using the Pearson correlation coefficient. Results: Both CBF and Tmax maps derived using 28 and 14 time points had similar structural similarity index measure (0.80–0.81; P >0.05) when compared with ground truth images. The Pearson correlation for the CBF and Tmax volumes derived from the model using 28-tp with ground truth volumes derived from the RAPID software was 0.69 for CBF and 0.74 for Tmax. The predicted maps were fully concordant in terms of laterality to the commercial perfusion maps. The mean Dice scores were 0.54 for the core infarct and 0.63 for the hypoperfusion maps. Conclusion: Artificial intelligence model-derived volumes show good correlation with RAPID-derived volumes for CBF and Tmax. Within the constraints of a small sample size, the perfusion map quality is similar when using 14-tp instead of 28-tp. Our findings provide proof of concept that vendor neutral artificial intelligence models for computed tomographic perfusion processing using complete or partial image data sets appear feasible. The model accuracy could be further optimized using larger data sets.


2021 ◽  
Author(s):  
Elizabeth Ing-Simmons ◽  
Nick Machnik ◽  
Juan M Vaquerizas

We previously presented Comparison of Hi-C Experiments using Structural Similarity (CHESS), an approach that applies the concept of the structural similarity index (SSIM) to Hi-C matrices, and demonstrated that it could be used to identify both regions with similar 3D chromatin conformation across species, and regions with different chromatin conformation in different conditions. In contrast to the claim of Lee et al. that the SSIM output of CHESS is independent of the input data, here we confirm that SSIM depends on both local and global properties of the input Hi-C matrices. We provide two approaches for using CHESS to highlight regions of differential genome organisation for further investigation, and expanded guidelines for choosing appropriate parameters and controls for these analyses.


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