chemical pattern recognition
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2022 ◽  
Vol 12 ◽  
Author(s):  
Lifei Gu ◽  
Xueqing Xie ◽  
Bing Wang ◽  
Yibao Jin ◽  
Lijun Wang ◽  
...  

Lonicerae japonicae flos (L. japonicae flos, Lonicera japonica Thunb.) is one of the most commonly prescribed botanical drugs in the treatment or prevention of corona virus disease 2019. However, L. japonicae flos is often confused or adulterated with Lonicerae flos (L. flos, Lonicera macrantha (D.Don) Spreng., Shanyinhua in Chinese). The anti-SARS-CoV2 activity and related differentiation method of L. japonicae flos and L. flos have not been documented. In this study, we established a chemical pattern recognition model for quality analysis of L. japonicae flos and L. flos based on ultra-high performance liquid chromatography (UHPLC) and anti-SARS-CoV2 activity. Firstly, chemical data of 59 batches of L. japonicae flos and L. flos were obtained by UHPLC, and partial least squares-discriminant analysis was applied to extract the components that lead to classification. Next, anti-SARS-CoV2 activity was measured and bioactive components were acquired by spectrum-effect relationship analysis. Finally, characteristic components were explored by overlapping feature extracted components and bioactive components. Accordingly, eleven characteristic components were successfully selected, identified, quantified and could be recommended as quality control marker. In addition, chemical pattern recognition model based on these eleven components was established to effectively discriminate L. japonicae flos and L. flos. In sum, the demonstrated strategy provided effective and highly feasible tool for quality assessment of natural products, and offer reference for the quality standard setting.


Molecules ◽  
2021 ◽  
Vol 26 (23) ◽  
pp. 7124
Author(s):  
Cheng Zheng ◽  
Wenting Li ◽  
Yao Yao ◽  
Ying Zhou

A method for the quality evaluation of Atractylodis Macrocephalae Rhizoma (AMR) based on high-performance liquid chromatography (HPLC) fingerprint, HPLC quantification, and chemical pattern recognition analysis was developed and validated. The fingerprint similarity of the 27 batches of AMR samples was 0.887–0.999, which indicates there was very limited variance between the batches. The 27 batches of samples were divided into two categories according to cluster analysis (CA) and principal component analysis (PCA). A total of six differential components of AMR were identified in the partial least-squares discriminant analysis (PLS-DA), among which atractylenolide I, II, III, and atractylone counted 0.003–0.045%, 0.006–0.023%, 0.001–0.058%, and 0.307–1.175%, respectively. The results indicate that the quality evaluation method could be used for quality control and authentication of AMR.


Molecules ◽  
2021 ◽  
Vol 26 (22) ◽  
pp. 6855
Author(s):  
Didi Ma ◽  
Lijun Wang ◽  
Yibao Jin ◽  
Lifei Gu ◽  
Xiean Yu ◽  
...  

Rhodiola, especially Rhodiola crenulate and Rhodiola rosea, is an increasingly widely used traditional medicine or dietary supplement in Asian and western countries. Because of the phytochemical diversity and difference of therapeutic efficacy among Rhodiola species, it is crucial to accurately identify them. In this study, a simple and efficient method of the classification of Rhodiola crenulate, Rhodiola rosea, and their confusable species (Rhodiola serrata, Rhodiola yunnanensis, Rhodiola kirilowii and Rhodiola fastigiate) was established by UHPLC fingerprints combined with chemical pattern recognition analysis. The results showed that similarity analysis and principal component analysis (PCA) could not achieve accurate classification among the six Rhodiola species. Linear discriminant analysis (LDA) combined with stepwise feature selection exhibited effective discrimination. Seven characteristic peaks that are responsible for accurate classification were selected, and their distinguishing ability was successfully verified by partial least-squares discriminant analysis (PLS-DA) and orthogonal partial least-squares discriminant analysis (OPLS-DA), respectively. Finally, the components of these seven characteristic peaks were identified as 1-(2-Hydroxy-2-methylbutanoate) β-D-glucopyranose, 4-O-glucosyl-p-coumaric acid, salidroside, epigallocatechin, 1,2,3,4,6-pentagalloyglucose, epigallocatechin gallate, and (+)-isolarisiresinol-4′-O-β-D-glucopyranoside or (+)-isolarisiresinol-4-O-β-D-glucopyranoside, respectively. The results obtained in our study provided useful information for authenticity identification and classification of Rhodiola species.


IAWA Journal ◽  
2021 ◽  
pp. 1-10
Author(s):  
Tianshi Wang ◽  
Xiaoling Liao ◽  
Liping Ning ◽  
Xueju Xu ◽  
Mei Li ◽  
...  

Abstract The object of this study is the wood of Phoebe bournei (Hemsl.) Yang. Firstly, the macroscopic and microscopic structural characteristics of P. bournei wood were studied, and then the wood was compared with other species of the same genus. Through GC-MS technology, the volatile substance composition of P. bournei wood was studied, and the common volatile substance compositions were analyzed by using correlation analysis, principal component analysis (PCA), and orthogonal partial least square discriminant model analysis (OPLS-DA) models. The purpose of this study was to determine the significantly different components of P. bournei wood in comparison to three similar species in the same genus and explore whether these can be used as a chemical pattern recognition method for this wood. The results showed that 11 common components were found in all the P. bournei wood samples. Through the correlation analysis between the samples of P. bournei from different sources, they had a strong interrelation and high correlation coefficient. P. bournei wood could be initially distinguished from the wood of the other three similar species of the same genus by PCA. Through OPLS-DA modeling and calculation the classification effect of the model was more obvious. The variable information used to analyze the experimental model was more complete, and the model had a strong prediction ability. With the combination of the load diagram (S-plot) and variable contribution index (VIP), variable components were preliminarily screened, and then inter-group t-test and variable content analysis were conducted for the samples. The results show that the OPLS-DA model analysis of valerianol and agarspirol has obvious differences, which can be used to distinguish wood of P. bournei from three other tree species of the same genus.


Molecules ◽  
2019 ◽  
Vol 24 (20) ◽  
pp. 3684 ◽  
Author(s):  
Yang Huang ◽  
Zhengjin Jiang ◽  
Jue Wang ◽  
Guo Yin ◽  
Kun Jiang ◽  
...  

Mahonia bealei (Fort.) Carr. (M. bealei) plays an important role in the treatment of many diseases. In the present study, a comprehensive method combining supercritical fluid chromatography (SFC) fingerprints and chemical pattern recognition (CPR) for quality evaluation of M. bealei was developed. Similarity analysis, hierarchical cluster analysis (HCA), principal component analysis (PCA) were applied to classify and evaluate the samples of wild M. bealei, cultivated M. bealei and its substitutes according to the peak area of 11 components but an accurate classification could not be achieved. PLS-DA was then adopted to select the characteristic variables based on variable importance in projection (VIP) values that responsible for accurate classification. Six characteristics peaks with higher VIP values (≥1) were selected for building the CPR model. Based on the six variables, three types of samples were accurately classified into three related clusters. The model was further validated by a testing set samples and predication set samples. The results indicated the model was successfully established and predictive ability was also verified satisfactory. The established model demonstrated that the developed SFC coupled with PLS-DA method showed a great potential application for quality assessment of M. bealei.


2018 ◽  
Vol 33 (14) ◽  
pp. 2113-2115 ◽  
Author(s):  
Xuexiao Cao ◽  
Yanan Liu ◽  
Meng Wang ◽  
Lili Sun ◽  
Xiaoliang Ren

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