Encapsulation of Plant Biocontrol Bacteria with Alginate as a Main Polymer Material

One of the most favored trends in modern agriculture is biological control. However, many reports show that survival of biocontrol bacteria is poor in host plants. Providing biocontrol agents with protection by encapsulation within external coatings has therefore become a popular idea. Various techniques, including extrusion, spray drying, and emulsion, have been introduced for encapsulation of biocontrol bacteria. One commonly used biopolymer for this type of microencapsulation is alginate, a biopolymer extracted from seaweed. Recent progress has resulted in the production of alginate-based microcapsules that meet key bacterial encapsulation requirements, including biocompatibility, biodegradability, and support of long-term survival and function. However, more studies are needed regarding the effect of encapsulation on protective bacteria and their targeted release in organic crop production systems. Most importantly, the efficacy of alginate use for the encapsulation of biocontrol bacteria in pest and disease management requires further verification. Achieving a new formulation based on biodegradable polymers can have significant effects on increasing the quantity and quality of agricultural products.

A Transcriptome Profile Reveals The Regulatory Mechanism of Verticillium Dahliae Against Bacillus

Background: Verticillium dahliae, the causal agent of Verticillium wilt, is notoriously invasive in many crops and has been involved in numerous epidemics worldwide. Bacillus species, as representatives of biocontrol bacteria, produce a variety of lipopeptides (LPs), which are useful as biofungicides to many pathogenic fungi, including Verticillium dahliae. This study will explore the mechanism of resistance of V. dahliae to Bacillus and biocontrol bacteria.Results: By using in vitro confrontation bioassays, we found that under the stress induced by Bacillus, the spore vitality of V. dahliae with larger colonies was higher, and more abundant microsclerotia were formed. Then, according to the RNA-Seq analysis, the target of rapamycin (TOR) and mitophagy pathways were enriched among the significantly upregulated 542 genes observed in two co-culture groups with different colony sizes. In addition, in the group of V. dahliae with large colonies, the pathways related to cell wall synthesis, microsclerotia formation and the clearance of reactive oxygen species were regulated, and the expression of genes was up-regulated.Conclusion: This study found that the larger colonies of V. dahliae were more resistant to the antagonistic actions of Bacillus and the likelihood of the formation of homeostasis. Therefore, the prevention of Verticillium wilt by Bacillus is more effective than the treatment of an active fungal infection. These transcriptomic insights provide direction for the use of fungicides in the prevention and treatment of diseases such as Verticillium wilt.

Screening of biocontrol bacteria against soft rot disease of Colocasia esculenta (L.) schott and its field application

Soft rot disease is a major pathogenic bacteria of Fuding areca taro and has caused serious losses. This study aims to screen biocontrol bacterial against soft rot disease. A total of 53 bacterial strains were isolated from the rhizosphere soil, nine of which exhibited good biocontrol effect against the pathogenic bacteria of soft rot disease as seen in antagonistic screening of biocontrol bacteria from corm in vitro. Strains were selected by physical and chemical experiments, biocontrol effect tests in vivo, molecular sequencing, morphological observation and field tests. Four strains including CAB-L005, CAB-L012, CAB-L014, and CAB-L022 exhibited strong antagonistic effects. On the basis of the sequence homology of 16S rRNA genes, the similarity between strain CAB-L005 and Bacillus tropicus was 100%, that between strain CAB-L012 and Bacillus subtilis was 99%, and that between strain CAB-L014 and Bacillus tequilensis was 100%, and similarity between strain CAB-L022 and Bacillus cereus was 100%. The isolated bacteria demonstrated good biocontrol effects in field experiments. In this study, four strains with good biocontrol application value were isolated and identified, providing a foundation for biocontrol against soft rot disease in areca taro.

Functional Analysis of Long Non-Coding RNAs Reveal Their Novel Roles in Biocontrol of Bacteria-Induced Tomato Resistance to Meloidogyne incognita

Root-knot nematodes (RKNs) severely affect plants growth and productivity, and several commercial biocontrol bacteria can improve plants resistance to RKNs. Pseudomonas putida Sneb821 isolate was found to induce tomatoes resistance against Meloidogyne incognita. However, the molecular functions behind induced resistance remains unclear. Long non-coding RNA (lncRNA) is considered to be a new component that regulates the molecular functions of plant immunity. We found lncRNA was involved in Sneb821-induced tomato resistance to M. incognita. Compared with tomato inoculated with M. incognita, high-throughput sequencing showed that 43 lncRNAs were upregulated, while 35 lncRNAs were downregulated in tomatoes previously inoculated with Sneb821. A regulation network of lncRNAs was constructed, and the results indicated that 12 lncRNAs were found to act as sponges of their corresponding miRNAs. By using qRT-PCR and the overexpression vector pBI121, we found the expression of lncRNA44664 correlated with miR396/GRFs (growth-regulating factors) and lncRNA48734 was correlated with miR156/SPL (squamosal promoter-binding protein-like) transcription factors. These observations provided a novel molecular model in biocontrol bacteria-induced tomato resistance to M. incognita.

Characterization ofRhodopseudomonas palustrispopulation dynamics on tobacco phyllosphere and induction of plant resistance toTobacco mosaic virusinfection

Although many biocontrol bacteria can be used to improve plant tolerance to stresses and to promote plant growth, the hostile environmental conditions on plant phyllosphere and the limited knowledge on bacterial colonization on plant phyllosphere minimized the beneficial effects produced by the biocontrol bacteria.Rhodopseudomonas palustrisstrain GJ-22 is known as a phyllosphere biocontrol agent. In this paper we described detailed processes of strain GJ-22 colony establishment at various colonization stages. We have shown that the preferable location sites of bacterial aggregates on leaf phyllosphere are grooves between plant epidermal cells. In this study, we categorized bacterial colonies into four phases. Analyses of expressions of plant defense-related genes showed that, starting from Phase III, bacterial cells in the Type 3 and Type 4 colonies started produce unidentified signals to induce host defense againTobacco mosaic virusinfection. To our knowledge, this is the first report focused on the colonization process of a phyllosphere biocontrol agent.

Antifungal activity of various chitinolytic bacteria against Colletotrichum in pepper

Colletotrichum gleosporioides causes the anthracnose disease in plants including vegetables and fruits. The pathogenicity of the strains was confirmed by using pepper fruit inoculation assays. The chitinolytic bacterial strains Paenibacillus elgii HOA73, Lysobacter capsici HS124, Streptomyces griseus, Pseudomonas fluorescens, and Paenibacillus ehimensis MA2012 were evaluated against the phytopathogenic fungal strains. The bacteria significantly inhibited C. gleosporioides strain 40003, the inhibition ranging from 17% to 37%. Similarly, 5–41% inhibition of C. gleosporioides 40896 was noticed. Moreover, C. gleosporioides 40965 and 42113 were also inhibited. The n-butanol extracted crude compound of P. ehimensis MA2012 completely inhibited the spore germination of the phytopathogen. Hence the chitinolysis may be considered as an important trait for screening the biocontrol bacteria against anthracnose.