molecular reactivity
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2021 ◽  
Vol 9 (3) ◽  
pp. 077-085
Author(s):  
Merve Şenğül ALPATER ◽  
Zaid H. AL-SAWAFF ◽  
Fatma KANDEMİRLİ

In this paper, the possible interactions between cisplatin Cl2H6N2Pt as an anticancer drug and gallium nitride (Ga12N12) nanocage have been investigated using the DFT/b3lyp/lanl2dz(d,p) level of theory. Three different orientations were used to mimic the cisplatin adsorbed on Ga12N12. To investigate the interaction mechanism between the two components, the adsorption energies and thermodynamic parameters, the electronic properties such as the energies and orbitals distribution of the highest occupied molecular orbital (HOMO), the lowest unoccupied molecular orbital (LUMO), the HOMO-LUMO energy gaps (Eg), thermodynamic properties were also investigated. Additionally, some quantum molecular descriptors were calculated to understand molecular reactivity. The main results revealed that the adsorption process of the drug compound on the surface of the nanocage varies with the adsorption site. The process showed that different energies could be obtained, where the highest energy value was when the drug compound was adsorbed with the nanocage at the chlorine atom, with a value of (41.85) kcal/mol. On the other hand, the distance between the drug compound atoms was affected before and after adsorption, which proves the existence of an interaction between the drug compound and the nanocage and considers it as a drug delivery vehicle.


Life ◽  
2021 ◽  
Vol 11 (11) ◽  
pp. 1204
Author(s):  
Lucia M. Sur ◽  
Ionel Armat ◽  
Emanuela Duca ◽  
Genel Sur ◽  
Iulia Lupan ◽  
...  

Food allergy (FA) is a condition with a growing incidence and is a constant concern for the medical world and healthcare providers. With potential symptoms including anaphylaxis, in the event of an allergic reaction the patient’s life may well be endangered. The diagnosis of FA is a continuous challenge because mild cases tend to be ignored or diagnosed late and young children with allergies are cared for by parents, who are not always able to accurately interpret symptoms. It is very important to be able to differentiate FAs from food intolerance and toxic reactions to food. An accurate diagnosis is required to provide personalized management of an FA. More sophisticated and accurate diagnostic tests, including component diagnosis and epitope reactivity, allow the provision of a directed diagnosis, a more accurate therapeutic approach, and a useful prognostic evaluation. Tests used in current practice include the specific search for serum IgE, elimination diets, oral food challenges, single, blind, and double-blind (DBPCFC) tests, as well as skin tests. The risk of anaphylaxis can be assessed by molecular diagnostics/component-resolved diagnosis (CRD) and by conducting a basophilic activation test (BAT). These tests allow a planned, personalized treatment based on molecular and clinical profiles. CRD can determine the individual profile of allergic molecular reactivity and enable the formulation of a prognostic judgment. Our article highlights the importance of knowing the immune mechanisms, diagnostics, and immunotherapies in FAs. Starting from observing exposure to food allergens, to identifying allergic reactions, analysing the severity of clinical manifestations, noting the possibilities of diagnosis, and illustrating adequate management strategies.


Molecules ◽  
2021 ◽  
Vol 26 (16) ◽  
pp. 4910
Author(s):  
Guocai Tian ◽  
Kaitao Yuan

The addition of corrosion inhibitors is an economic and environmental protection method to prevent the corrosion of copper. The adsorption, performance, and mechanism of three 1-alkyl-3-methylimidazolium hydrogen sulfate ([BMIM]HSO4, [HMIM]HSO4, and [OMIM]HSO4) ionic liquids (ILs) on the copper surface in 0.5 M H2SO4 solutions were studied by quantum chemical calculation, quantitative structure-activity relationship (QSAR), and molecular dynamics simulation. It is found that the main reactive site is located on the imidazolium ring (especially the C2, N4, and N7 groups). When the alkyl chain of the imidazolium ring is increasing, the molecular reactivity of the ILs and the interaction between the ILs inhibitor and copper surface are enhanced. The imidazole ring of the ILs tends to be adsorbed on Cu (111) surface in parallel through physical adsorption. The order of adsorption energy is [Bmim]HSO4 < [Hmim]HSO4 < [OMIM]HSO4, which is in agreement with the experimental order of corrosion efficiency. On the imidazole ring, the interaction between the copper surface and the C atom is greater than that between the copper surface and the N atom. It is found that ILs addition can hinder the diffusion of corrosion particles, reduce the number density of corrosion particles and slow down the corrosion rate. The order of inhibition ability of three ILs is [Bmim]HSO4 < [Hmim]HSO4 < [OMIM]HSO4,which agree well with experimental results. A reliable QSAR correlation between the inhibition corrosion efficiency and molecular reactivity parameters of the ILs was established.


2021 ◽  
Vol 12 (3) ◽  
pp. 3225-3237

The reactivity and adsorption behavior of five organic inhibitors of pyridine and its derivatives of 2-picoline, 3-picoline, 4-picoline, and 2,4-lutidine at the Al(111) lattice in hydrochloric acid was studied by the principle of the HF and B3LYP level using the 6-31G and LANL2DZ basis sets from the program package gaussian 03. The compound was adsorbed on the metal lattice based on the calculated results, mainly in their protonated forms. In the Al (111)-lattice, the charge is transferred to the inhibitor, and the organic inhibitor is adsorbed at the Al (111)-lattice in an inclined state. The quantum chemical calculations of molecular reactivity show that the frontier orbitals of the four additives are distributed around the nitrogen atom of the pyridine ring, the aluminum atom of Al (111)-lattice, and active electrophilic centers are located on the nitrogen atoms of the pyridine ring. All five molecules were adsorbed with the chemical adsorption on the Al (111)-lattice, and the order of adsorption was 2-picoline>2, 4-lutidine> 4-picoline> 3-picoline> pyridine. The N atoms of four derivatives form N-Al bonds with the Al atoms of the Al (111)-lattice, which makes derivatives stably adsorb on the Al lattice.


2021 ◽  
Vol 1236 ◽  
pp. 130292
Author(s):  
M.A. Mostafa ◽  
Ashraf M. Ashmawy ◽  
M A.M. Abdel Reheim ◽  
Mahmoud A. Bedair ◽  
Ahmed M. Abuelela

2021 ◽  
Vol 4 (1) ◽  
Author(s):  
Erik P. Månsson ◽  
Simone Latini ◽  
Fabio Covito ◽  
Vincent Wanie ◽  
Mara Galli ◽  
...  

AbstractSudden ionisation of a relatively large molecule can initiate a correlation-driven process dubbed charge migration, where the electron density distribution is expected to rapidly move along the molecular backbone. Capturing this few-femtosecond or attosecond charge redistribution would represent the real-time observation of electron correlation in a molecule with the enticing prospect of following the energy flow from a single excited electron to the other coupled electrons in the system. Here, we report a time-resolved study of the correlation-driven charge migration process occurring in the nucleic-acid base adenine after ionisation with a 15–35 eV attosecond pulse. We find that the production of intact doubly charged adenine – via a shortly-delayed laser-induced second ionisation event – represents the signature of a charge inflation mechanism resulting from many-body excitation. This conclusion is supported by first-principles time-dependent simulations. These findings may contribute to the control of molecular reactivity at the electronic, few-femtosecond time scale.


Chemosensors ◽  
2021 ◽  
Vol 9 (5) ◽  
pp. 89
Author(s):  
Pankaj Vadgama

Oxygen and nitrogen free radicals (RONS) form an exceptionally reactive molecular assembly within eukaryote cells. This perspective article gives a combined overview of different facets of research covering molecular reactivity, resultant tissue damage and final tissue outcomes as they relate to major disease. There is an emphasis on cardiovascular disease, as the damage processes are best liked to the pathology. The overriding importance of inflammation in driving damage across all tissues is highlighted. Brief coverage is also provided of measurement approaches, respectively for antioxidant status, using potentiometry, and voltammetry for selected target species. Whilst damage due to RONS is a common focus, the fundamental importance of RONS to biological signalling is also covered here as an indispensable basis for life. The article thus provides a global overview of this topic for anyone wishing to understand the current status across multiple fronts.


Crystals ◽  
2021 ◽  
Vol 11 (2) ◽  
pp. 98
Author(s):  
Guocai Tian ◽  
Huanhuan Du ◽  
Hongmei Zhang

The reactivity and adsorption behavior of three pyridine amide additives (Nicotinamide, Pyridine-2-formamide and Pyridine-4-formamide) on the Pt (111) surface was studied by First principle methods. The quantum chemical calculations of molecular reactivity show that the frontier orbitals of the three additives are distributed around the pyridine ring, oxygen atom of carbonyl and nitrogen atom of amino, and the nucleophilic and electrophilic active centers are located on the nitrogen atoms of pyridine ring, oxygen atom of carbonyl and nitrogen atom of amino. All three molecules were adsorbed with the chemical adsorption on the Pt (111) surface, and the order of adsorption was Nicotinamide > Pyridine-2-formamide > Pyridine-4-formamide. The C and N atoms of three derivatives forms C-Pt and N-Pt bonds with the Pt atoms of the Pt (111) surface, which makes derivatives stably adsorb on the Pt surface and form a protective film. The protective film inhibits the diffusion of atoms to the surface of the growth center, so as to inhibit the formation of dendrite and obtain a smooth aluminum deposition layer.


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