Toward a More Comprehensive View of α-Amylase across Decapods Crustaceans

Decapod crustaceans are a very diverse group and have evolved to suit a wide variety of diets. Alpha-amylases enzymes, responsible for starch and glycogen digestion, have been more thoroughly studied in herbivore and omnivore than in carnivorous species. We used information on the α-amylase of a carnivorous lobster as a connecting thread to provide a more comprehensive view of α-amylases across decapods crustaceans. Omnivorous crustaceans such as shrimps, crabs, and crayfish present relatively high amylase activity with respect to carnivorous crustaceans. Yet, contradictory results have been obtained and relatively high activity in some carnivores has been suggested to be a remnant trait from ancestor species. Here, we provided information sustaining that high enzyme sequence and overall architecture conservation do not allow high changes in activity, and that differences among species may be more related to number of genes and isoforms, as well as transcriptional and secretion regulation. However, recent evolutionary analyses revealed that positive selection might have also occurred among distant lineages with feeding habits as a selection force. Some biochemical features of decapod α-amylases can be related with habitat or gut conditions, while less clear patterns are observed for other enzyme properties. Likewise, while molt cycle variations in α-amylase activity are rather similar among species, clear relationships between activity and diet shifts through development cannot be always observed. Regarding the adaptation of α-amylase to diet, juveniles seem to exhibit more flexibility than larvae, and it has been described variation in α-amylase activity or number of isoforms due to the source of carbohydrate and its level in diets, especially in omnivore species. In the carnivorous lobster, however, no influence of the type of carbohydrate could be observed. Moreover, lobsters were not able to fine-regulate α-amylase gene expression in spite of large changes in carbohydrate content of diet, while retaining some capacity to adapt α-amylase activity to very low carbohydrate content in the diets. In this review, we raised arguments for the need of more studies on the α-amylases of less studied decapods groups, including carnivorous species which rely more on dietary protein and lipids, to broaden our view of α-amylase in decapods crustaceans.

Parental Influence and Sexual Selection

This chapter addresses how the genetic relatedness between parents and their children results in the two parties having converging as well as diverging interests. In the domain of mating, these interests, along with other factors such as the trade-offs inherent in mating, give rise to an opportunity cost of free mate choice: Parents have much to lose if they allow their children to exercise choice freely. This opportunity cost provides a strong incentive to parents to influence their children’s mate choices. In preindustrial societies, parents manage to exercise direct control, which is predominantly manifested in the institution of arranged marriage. In postindustrial societies, parents exercise influence indirectly through manipulation. Ultimately, parental influence over mating gives rise to a sexual selection force, namely parental choice, which may be unique to the human species.

Lineage-level Divergence of Copepod Glycerol Transporters and the Emergence of Isoform-specific Trafficking Regulation

Transmembrane conductance of glycerol is typically facilitated by aquaglyceroporins (Glps), which are commonly encoded by multiple genes in metazoan organisms. To date, however, little is known concerning the evolution of Glps in Crustacea or what forces might underly such gene redundancy. Here we show that Glp evolution in Crustacea is highly divergent, ranging from single copy genes in species of tadpole shrimps, isopods, amphipods and decapods to up to 10 copies in diplostracan water fleas although with monophyletic origins in each lineage. By contrast Glp evolution in Copepoda appears to be polyphyletic, with high rates of gene duplication occurring in a genera- and species-specifc manner. Based upon functional experiments on the Glps from a parasitic copepod (Lepeophtheirus salmonis), we show that such lineage-level gene duplication and splice variation is coupled with a high rate of neofunctionalization. For L. salmonis, splice variation of a given gene resulted in tissue- or sex-specific expression of the channels, with each variant evolving unique sites for PKC or PKA regulation of intracellular membrane trafficking. The data thus reveal that mutations favouring a high fidelity control of intracellular trafficking regulation can be a selection force for the evolution and retention of multiple Glps in copepods.

Integrated Theories of Biological Aging

Aging is a progressive process with multiple biological processes collectively deteriorating with time, ultimately causing loss of physiological functions necessary for survival and reproduction. It is also thought to have a strong evolutionary basis, largely resulting from the lack of selection force. Here, we discuss the evolutionary aspects of aging and a selection of theories founded on a variety of biological functions that have been shown to be involved in aging in multiple model organisms, ranging from the simple yeast, worms, flies, killifish, and rodents, to non-human primates and humans. The conglomerate of distinct theories has together revolutionized aging research in the past several decades, far more than what humankind has known since the dawn of civilization. However, not one theory alone can independently explain aging and should not be interpreted out of context of the cell and organism in its entirety. That said, the 21st century has been and will be an exciting time in the field of aging, with scientific advances on health span and lifespan being made at multiple fronts of biology and medicine in an unprecedented scale.

Selection-like biases emerge in population models with recurrent jackpot events

Evolutionary dynamics driven out of equilibrium by growth, expansion or adaptation often generate a characteristically skewed distribution of descendant numbers: The earliest, the most advanced or the fittest ancestors have exceptionally large number of descendants, which Luria and Delbrueck called "jackpot" events. Here, we show that recurrent jackpot events generate a deterministic bias favoring majority alleles, which is equivalent to an effective frequency-dependent selection (proportional to the log ratio of the frequencies of mutant and wild-type alleles). This "fictitious" selection force results from the fact that majority alleles tend to sample deeper into the tail of the descendant distribution. The flipside of this sampling effect is the rare occurrence of large frequency hikes in favor of minority alleles, which ensures that the allele frequency dynamics remains neutral overall unless genuine selection is present. The limiting allele frequency process is dual to the Bolthausen-Sznitman coalescent and has a particularly simple representation in terms of the logarithm of the mutant frequency. The resulting picture of a selection-like bias compensated by rare big jumps allows for an intuitive understanding of allele frequency trajectories and enables the exact calculation of transition densities for a range of important scenarios, including population size changes and different forms of selection. The fixation of unconditionally beneficial mutations is shown to be exponentially suppressed and balancing selection can maintain diversity only if the population size is large enough. We briefly discuss analogous effects in disordered complex systems, where sampling-induced biases can be viewed as ergodicity breaking driving forces.

Fluctuating asymmetry in an extreme morphological adaptation in the Chilean bee Xeromelissa rozeni (Hymenoptera: Colletidae)

Fluctuating asymmetry (FA), random deviations from perfect symmetry in bilateral traits, is a common inverse measure of developmental stability (DS), which is related to one’s ability to buffer against environmental and genetic perturbations. There is a widespread hypothesis that heterozygosity grants an increased ability to compensate for developmental errors caused by genetic and environmental factors, rendering homozygous individuals less symmetric than heterozygous ones. In addition, if natural selection on FA is common, nonessential traits should exhibit higher asymmetry than functionally essential traits. This is especially well tested in haplodiploid organisms, which present a clear distinction between “homo”zygosity (males) and heterozygosity (females). Relatively few FA studies looked at this relationship in hymenopterans or in haplodiploid organisms in general and the results are rather inconsistent. This study compares FA measurements of seven parts of the maxillary palpus, with sclerotized and membranous parts scored separately, and two wing venation characters for males and females of the Chilean bee Xeromelissa rozeni (Toro and Moldenke, 1979). The results of this study suggest that there is an equally strong selection force for maxillary palp symmetry in both males and females leading to a relatively low FA in both sexes, and that less functional traits exhibit higher FA due to relaxation of selection. Lastly, we stress the importance of testing a larger number of independent traits.

Molecular evolution of candidate sour taste receptor gene PKD1L3 in mammals

The PKD1L3 gene encodes an ion channel protein that can interact with the PKD2L1 protein to form a candidate sour taste receptor. In the present study, we have analyzed the evolutionary patterns of PKD1L3 genes from 10 mammalian species. The results showed that PKD1L3 genes have evolved under a dominant purifying selection force. However, for some branches and sites, PKD1L3 genes were detected to have been operated by positive selection. Moreover, some of these positive evolutionary sites are likely to participate in acid stimulus recognition. In rodents, PKD1L3 genes evolved more rapidly than other mammalian lineages. Combined with other functional research reports, our results suggest that rodents may not be the most appropriate model for functional research on the PKD1L3 gene.

Salticid predation as one potential driving force of ant mimicry in jumping spiders

Many spiders possess myrmecomorphy, and species of the jumping spider genus Myrmarachne exhibit nearly perfect ant mimicry. Most salticids are diurnal predators with unusually high visual acuity that prey on various arthropods, including conspecifics. In this study, we tested whether predation pressure from large jumping spiders is one possible driving force of perfect ant mimicry in jumping spiders. The results showed that small non-ant-mimicking jumping spiders were readily treated as prey by large ones (no matter whether heterospecific or conspecific) and suffered high attack and mortality rates. The size difference between small and large jumping spiders significantly affected the outcomes of predatory interactions between them: the smaller the juvenile jumping spiders, the higher the predation risk from large ones. The attack and mortality rates of ant-mimicking jumping spiders were significantly lower than those of non-ant-mimicking jumping spiders, indicating that a resemblance to ants could provide protection against salticid predation. However, results of multivariate behavioural analyses showed that the responses of large jumping spiders to ants and ant-mimicking salticids differed significantly. Results of this study indicate that predation pressure from large jumping spiders might be one selection force driving the evolution of nearly perfect myrmecomorphy in spiders and other arthropods.

Ancient Atmospheres and the Evolution of Oxygen Sensing Via the Hypoxia-Inducible Factor in Metazoans

Metazoan diversification occurred during a time when atmospheric oxygen levels fluctuated between 15 and 30%. The hypoxia-inducible factor (HIF) is a primary regulator of the adaptive transcriptional response to hypoxia. Although the HIF pathway is highly conserved, its complexity increased during periods when atmospheric oxygen concentrations were increasing. Thus atmospheric oxygen levels may have provided a selection force on the development of cellular oxygen-sensing pathways.