Visualising plant colonisation by beneficial bacteria: a key step to improve the understanding of plant–microbe interactions

Plants contain diverse microorganisms that interact with their hosts and with each other. Beneficial bacteria can be utilised on crops to protect plants against biotic and abiotic stresses and to stimulate plant growth. However, the behaviour of specific microorganisms on and within plants is still underexplored. Knowledge of bacterial colonisation behaviour and the precise ecological niches in a natural environment of a target strain can lead to better application and utilisation of these microorganisms for crop enhancement, in different plant soil environments, and for both biocontrol and biofertilisation approaches in organic and integrated protection systems. Understanding colonisation characteristics will also provide information on putative new strategies for maximising inoculation efficiency and thus crop enhancement. In this chapter, we set out how beneficial bacteria can colonise their host plants under various conditions and demonstrate how an understanding of plant colonisation can be used to improve bacterial application approaches.

Advance of soy commodity in the southern Amazonia with deforestation via PRODES and ImazonGeo: a moratorium-based approach

The guidance on decision-making regarding deforestation in Amazonia has been efficient as a result of monitoring programs using remote sensing techniques. Thus, the objective of this study was to identify the expansion of soybean farming in disagreement with the Soy Moratorium (SoyM) in the Amazonia biome of Mato Grosso from 2008 to 2019. Deforestation data provided by two Amazonia monitoring programs were used: PRODES (Program for Calculating Deforestation in Amazonia) and ImazonGeo (Geoinformation Program on Amazonia). For the identification of soybean areas, the Perpendicular Crop Enhancement Index (PCEI) spectral model was calculated using a cloud platform. To verify areas (polygons) of largest converted forest-soybean occurrences, the Kernel Density (KD) estimator was applied. Mann–Kendall and Pettitt tests were used to identify trends over the time series. Our findings reveal that 1,387,288 ha were deforested from August 2008 to October 2019 according to PRODES data, of which 108,411 ha (7.81%) were converted into soybean. The ImazonGeo data showed 729,204 hectares deforested and 46,182 hectares (6.33%) converted into soybean areas. Based on the deforestation polygons of the two databases, the KD estimator indicated that the municipalities of Feliz Natal, Tabaporã, Nova Ubiratã, and União do Sul presented higher occurrences of soybean fields in disagreement with the SoyM. The results indicate that the PRODES system presents higher data variability and means statistically superior to ImazonGeo.

Advantage of Nanotechnology-Based Genome Editing System and Its Application in Crop Improvement

Agriculture is an important source of human food. However, current agricultural practices need modernizing and strengthening to fulfill the increasing food requirements of the growing worldwide population. Genome editing (GE) technology has been used to produce plants with improved yields and nutritional value as well as with higher resilience to herbicides, insects, and diseases. Several GE tools have been developed recently, including clustered regularly interspaced short palindromic repeats (CRISPR) with nucleases, a customizable and successful method. The main steps of the GE process involve introducing transgenes or CRISPR into plants via specific gene delivery systems. However, GE tools have certain limitations, including time-consuming and complicated protocols, potential tissue damage, DNA incorporation in the host genome, and low transformation efficiency. To overcome these issues, nanotechnology has emerged as a groundbreaking and modern technique. Nanoparticle-mediated gene delivery is superior to conventional biomolecular approaches because it enhances the transformation efficiency for both temporal (transient) and permanent (stable) genetic modifications in various plant species. However, with the discoveries of various advanced technologies, certain challenges in developing a short-term breeding strategy in plants remain. Thus, in this review, nanobased delivery systems and plant genetic engineering challenges are discussed in detail. Moreover, we have suggested an effective method to hasten crop improvement programs by combining current technologies, such as speed breeding and CRISPR/Cas, with nanotechnology. The overall aim of this review is to provide a detailed overview of nanotechnology-based CRISPR techniques for plant transformation and suggest applications for possible crop enhancement.

Uptake, Translocation, and Consequences of Nanomaterials on Plant Growth and Stress Adaptation

Nanotechnology has shown promising potential tools and strategies at the nanometer scale to improve food production and meet the future demands of agricultural and food security. However, considering nanotechnology’s potential benefits to date, their applicability has not yet reached up to field conditions. Increasing concerns regarding absorption, translocation, bioavailability, toxicity of nanoparticles, and impropriety of the regulatory framework restrict the complete acceptance and inclination of the agricultural sector to implement nanotechnologies. The biological function of nanoparticles depends on their physicochemical properties, the method of application, and concentration. The effects of the various types of nanoparticles (NPs) on plants were determined to increase seed germination and biomass or grain yield. The NPs also increased the plant’s resistance to various biotic and abiotic stresses. The plant’s biological functions depend on the events that occur at the molecular level. However, little progress has been made at the molecular level influenced by nanoparticles, which is an important step in evaluating potential mechanisms and plants’ effects. Therefore, it is important to understand plants’ underlying mechanism and response towards nanoparticles, and the gene expression changes through molecular approaches. The associations of nanomaterials with plant cells, the process of internalization, and the distribution of biomolecules using nanoparticles as a carrier are studied but not well understood. The transmission of biomolecules, such as nucleic acids, is a major obstacle due to cell walls, limiting the application of nanomaterials in crop enhancement mediated by genetic engineering. Recently, the use of different nanomaterials for nucleic acid delivery in plant cells has been published. Here, we aim to update researchers on the absorption and translocation of nanoparticles and elaborate on the importance of nanoparticles in agriculture and crop stress tolerance.

Spring phenological adaptation of blue honeysuckle (Lonicera caerulea L.) foundation germplasm in a temperate climate

Blue honeysuckle (Lonicera caerulea L.) is a novel fruit crop that stands out for its northern climatic adaptation. Understanding spring phenological adaptation to temperate climate is central to development of a broader range of production and greater mainstream crop potential. In 2012 and 2013 across three sites in the Fraser Valley, British Columbia, spring phenophases from bud break to fruit harvest were determined across three foundation groups. Genetic variability is characterized for Russian, Japanese, and Kuril blue honeysuckle foundation groups used in breeding at the University of Saskatchewan, Saskatoon, SK. Germplasm group membership is the principal feature of phenological adaptation. Although temperate climate adaptation is limited in the Russian germplasm, the intermediate Japanese and later Kuril spring phenology provide an adequate degree of temperate climate adaptation to facilitate commercial production. These findings demonstrate that blue honeysuckle has phenological adaptation to a temperate climate. Diversity between and within genetic groups presents opportunities for crop enhancement, especially through breeding for later bloom periods.