New species of Elaphoidella Chappuis, 1929 and Schizopera Sars, 1905 (Copepoda: Harpacticoida) from two caves in northeastern and southern Thailand

Two new copepod species from two caves in northeastern and southern Thailand are described. Elaphoidella isana sp. nov. and Schizopera paktaii sp. nov. were collected from the unsaturated zone of freshwater pools fed only by dripping water. They are closely related to E. intermedia Chappuis, 1931 and S. validior Sars, 1909, respectively. Elaphoidella isana sp. nov. can be distinguished from its closest relative by the armature of P4 and P5, and by the ornamentation of caudal rami. Schizopera paktaii sp. nov. differs from its relative S. validior in the armature of P1, P5 and caudal rami.

Xarifiid Copepods (Copepoda: Cyclopoida: Xarifiidae) Parasitic in the Coral Psammocora columna Dana, 1846 from Taiwan

A comprehensive knowledge of relationships between coral and coral-associated organisms is essential for the conservation studies of the coral reef community, yet the biodiversity database of coral-inhabiting copepods remains incomplete. Here we surveyed in a widely distributed scleractinian coral, Psammocora columna Dana, 1846, and newly discovered two endoparasitic copepod species, Xarifia yanliaoensis sp. nov. and Xarifia magnifica sp. nov. These two new species are described based on specimens collected in Taiwan, and they share several common morphological characters of Xarifia copepods, i.e., region dorsal to fifth legs having three posteriorly directed processes unequally. However, X. yanliaoensis sp. nov. is distinguishable from other species by the morphology of the endopods of legs, antenna, maxilla, and maxilliped (in both genders). The morphological characters of X. magnifica sp. nov. are the endopods of legs, leg 5, and maxilliped in the male. Including the two new species described in the present work, the genus Xarifia Humes, 1960 belongs to the cyclopoid family Xarifiidae Humes, 1960 currently consists of 94 species, and eight of them live in association with the Psammocora coral. A comparison table and a key to the species of Xarifia from Psammocora corals are given herein.

A synthesis tree of the Copepoda: integrating phylogenetic and taxonomic data reveals multiple origins of parasitism

The Copepoda is a clade of pancrustaceans containing 14,485 species that are extremely varied in their morphology and lifestyle. Not only do copepods dominate marine plankton and sediment communities and make up a sizeable component of the freshwater plankton, but over 6,000 species are symbiotically associated with every major phylum of marine metazoans, mostly as parasites. Unfortunately, our understanding of copepod evolutionary relationships is relatively limited in part because of their extremely divergent morphology, sparse taxon sampling in molecular phylogenetic analyses, a reliance on only a handful of molecular markers, and little taxonomic overlap between phylogenetic studies. Here, a synthesis tree method is used to integrate published phylogenies into a more comprehensive tree of copepods by leveraging phylogenetic and taxonomic data. A literature review in this study finds fewer than 500 species of copepods have been sampled in molecular phylogenetic studies. Using the Open Tree of Life platform, those taxa that have been sampled in previous phylogenetic studies are grafted together and combined with the underlying copepod taxonomic hierarchy from the Open Tree of Life Taxonomy to make a synthesis phylogeny of all copepod species. Taxon sampling with respect to molecular phylogenetic analyses is reviewed for all orders of copepods and shows only 3% of copepod species have been sampled in phylogenetic studies. The resulting synthesis phylogeny reveals copepods have transitioned to a parasitic lifestyle on at least 14 occasions. We examine the underlying phylogenetic, taxonomic, and natural history data supporting these transitions to parasitism; review the species diversity of each parasitic clade; and identify key areas for further phylogenetic investigation.

Population Dynamics, Fecundity and Fatty Acid Composition of Oithona nana (Cyclopoida, Copepoda), Fed on Different Diets

The marine copepod species Oithona nana is considered as one of the most successfully mass cultured Cyclopoida species in marine hatcheries. This study investigated the effects of four feed diets (soybean, yeast, rice bran, and corn starch) on the population growth, growth rate, population composition, fecundity, and fatty acid composition of native isolated Cyclopoida copepod species O. nana. The experiment was continued for 15 days and the copepods were fed on one of the four diets with a concentration of 1 g 10−6 individual day−1. The results revealed that corn starch was found to be the most supportive diet for population growth and population growth rate. For nutritional value, copepods fed on rice bran were detected to have the highest content of MUFA, PUFA, and the lowest SFA and SFA/UFA ratio; more importantly, the rice bran diet was the only treatment that showed C20:5ω3. Moreover, copepods fed on rice bran showed the highest significant female fecundity, copepodite, and nauplii percent. Finally, the protocols described in the current study concluded that the dry feeds, especially corn starch, are very useful and applicable in hatcheries for maximizing the fecundity and density of Cyclopoida copepod species, O. nana.

Application of Next-Generation Sequencing for the Determination of the Bacterial Community in the Gut Contents of Brackish Copepod Species (Acartia hudsonica, Sinocalanus tenellus, and Pseudodiaptomus inopinus)

The gut bacterial communities of copepods can affect metabolic processes, and consequently, their activity can be related to the release of organic substances to the environment. Hence, they are important for organic matter cycling in marine coast food webs. However, information regarding the variation in gut bacterial communities based on copepod species and environmental variations is limited. We analysed the differences in gut bacterial communities from dominant copepod species, i.e., Acartia hudsonica, Sinocalanus tenellus, and Pseudodiaptomus inopinus, in a brackish reservoir. The core bacteria among the copepod species and locations consisted of the following main operational taxonomic units (OTUs): Novosphingobium capsulatum and the family Rhodobacteraceae belonging to Alphaproteobacteria, which is abundant in seawater and freshwater aquatic ecosystems as a zooplankton-associated bacterial community. The bacterial community composition of each copepod (except the core species) showed high variability. The bacterial community diversity differed depending on the copepod species and the sites’ environmental conditions, especially salinity, e.g., compositional variations in the bacterial community of P. inopinus were high at sites with low salinity. Therefore, the gut bacterial community of each copepod species responds differently to the environment.