Effect of Data Augmentation and Lung Mask Segmentation for Automated Chest Radiograph Interpretation of Some Lung Diseases

Author(s):  
Peng Gang ◽  
Wei Zeng ◽  
Yuri Gordienko ◽  
Yuriy Kochura ◽  
Oleg Alienin ◽  
...  
2020 ◽  
Vol 6 (12) ◽  
pp. 131
Author(s):  
Stefanus Tao Hwa Kieu ◽  
Abdullah Bade ◽  
Mohd Hanafi Ahmad Hijazi ◽  
Hoshang Kolivand

The recent developments of deep learning support the identification and classification of lung diseases in medical images. Hence, numerous work on the detection of lung disease using deep learning can be found in the literature. This paper presents a survey of deep learning for lung disease detection in medical images. There has only been one survey paper published in the last five years regarding deep learning directed at lung diseases detection. However, their survey is lacking in the presentation of taxonomy and analysis of the trend of recent work. The objectives of this paper are to present a taxonomy of the state-of-the-art deep learning based lung disease detection systems, visualise the trends of recent work on the domain and identify the remaining issues and potential future directions in this domain. Ninety-eight articles published from 2016 to 2020 were considered in this survey. The taxonomy consists of seven attributes that are common in the surveyed articles: image types, features, data augmentation, types of deep learning algorithms, transfer learning, the ensemble of classifiers and types of lung diseases. The presented taxonomy could be used by other researchers to plan their research contributions and activities. The potential future direction suggested could further improve the efficiency and increase the number of deep learning aided lung disease detection applications.


Author(s):  
Ren G ◽  
◽  
Lam S-K ◽  
Ni R ◽  
Yang D ◽  
...  

Objective: Bone suppression of chest radiograph holds great promise to improve the localization accuracy in Image-Guided Radiation Therapy (IGRT). However, data scarcity has long been considered as the prime culprit of developing Convolutional Neural Networks (CNNs) models for the task of bone suppression. In this study, we explored the effectiveness of various data augmentation techniques for the task of bone suppression. Methods: In this study, chest radiograph and bone-free chest radiograph are derived from 59 high-resolution CT scans. Two CNN models (U-Net and Generative Adversarial Network (GAN)) were adapted to explore the effectiveness of various data augmentation techniques for bone signal suppression in the chest radiograph. Lung radiograph and bone-free radiograph were used as the input and target label, respectively. Impacts of six typical data augmentation techniques (flip, cropping, noise injection, rotation, shift and zoom) on model performance were investigated. A series of statistical evaluating metrics, including Peak Signal-To-Noise Ratio (PSNR), Structural Similarity (SSIM) and Mean Absolute Error (MAR), were deployed to comprehensively assess the prediction performance of the two networks under the six data augmentation strategies. Quantitative comparative results showed that different data augmentation techniques exhibited a varying degree of influence on the performance of CNN models in the task of CR bone signal suppression. Results: For the U-Net model, flips, rotation (10 to 20 degrees), all the shifts, and zoom (1/8) resulted in improved model prediction accuracy. By contrast, other studied augmentation techniques showed adverse impacts on the model performance. For the GAN model, it was found to be more sensitive to the studied augmentation techniques than the U-Net. Vertical flip was the only augmentation method that yielded enhanced model performance. Conclusion: In this study, we found that different data augmentation techniques resulted in a varying degree of impacts on the prediction performance of U-Net and GAN models in the task of bone suppression in CR. However, it remains challenging to determine the optimal parameter settings for each augmentation technique. In the future, a more comprehensive evaluation is still warranted to evaluate the effectiveness of different augmentation techniques in task-specific image synthesis.


2020 ◽  
Vol 43 ◽  
Author(s):  
Myrthe Faber

Abstract Gilead et al. state that abstraction supports mental travel, and that mental travel critically relies on abstraction. I propose an important addition to this theoretical framework, namely that mental travel might also support abstraction. Specifically, I argue that spontaneous mental travel (mind wandering), much like data augmentation in machine learning, provides variability in mental content and context necessary for abstraction.


Author(s):  
N Buda ◽  
M Piskunowicz ◽  
M Porzezińska ◽  
W Kosiak ◽  
Z Zdrojewski

Author(s):  
Alex Hernández-García ◽  
Johannes Mehrer ◽  
Nikolaus Kriegeskorte ◽  
Peter König ◽  
Tim C. Kietzmann

2007 ◽  
Vol 57 (1) ◽  
pp. 21
Author(s):  
Seong Hoon Park ◽  
Joon Beom Seo ◽  
Namkug Kim ◽  
June Goo Lee ◽  
Young Kyung Lee ◽  
...  

2016 ◽  
Vol 1 (3) ◽  
pp. 138-144
Author(s):  
Ina Edwina ◽  
Rista D Soetikno ◽  
Irma H Hikmat

Background: Tuberculosis (TB) and diabetes mellitus (DM) prevalence rates are increasing rapidly, especially in developing countries like Indonesia. There is a relationship between TB and DM that are very prominent, which is the prevalence of pulmonary TB with DM increased by 20 times compared with pulmonary TB without diabetes. Chest X-ray picture of TB patients with DM is atypical lesion. However, there are contradictories of pulmonary TB lesion on chest radiograph of DM patients. Nutritional status has a close relationship with the morbidity of DM, as well as TB.Objectives: The purpose of this study was to determine the relationship between the lesions of TB on the chest radiograph of patients who su?er from DM with their Body Mass Index (BMI) in Hasan Sadikin Hospital Bandung.Material and Methods: The study was conducted in Department of Radiology RSHS Bandung between October 2014 - February 2015. We did a consecutive sampling of chest radiograph and IMT of DM patients with clinical diagnosis of TB, then the data was analysed by Chi Square test to determine the relationship between degree of lesions on chest radiograph of pulmonary TB on patients who have DM with their BMI.Results: The results showed that adult patients with active pulmonary TB with DM mostly in the range of age 51-70 years old, equal to 62.22%, with the highest gender in men, equal to 60%. Chest radiograph of TB in patients with DM are mostly seen in people who are obese, which is 40% and the vast majority of lesions are minimal lesions that is equal to 40%.Conclusions: There is a signifcant association between pulmonary TB lesion degree with BMI, with p = 0.03


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