Identification of copy number variation of CAPN10 in Thais with type 2 diabetes by multiplex PCR and denaturing high performance liquid chromatography (DHPLC)

Gene ◽  
2012 ◽  
Vol 506 (2) ◽  
pp. 383-386 ◽  
Author(s):  
Nattachet Plengvidhya ◽  
Kanjana Chanprasert ◽  
Watip Tangjittipokin ◽  
Wanna Thongnoppakhun ◽  
Pa-thai Yenchitsomanus
2020 ◽  
Vol 66 (5) ◽  
pp. 718-726
Author(s):  
Yuwei Liu ◽  
Caren E Smith ◽  
Laurence D Parnell ◽  
Yu-Chi Lee ◽  
Ping An ◽  
...  

Abstract Background Copy number variation (CNV) in the salivary amylase gene (AMY1) modulates salivary α-amylase levels and is associated with postprandial glycemic traits. Whether AMY1-CNV plays a role in age-mediated change in insulin resistance (IR) is uncertain. Methods We measured AMY1-CNV using duplex quantitative real-time polymerase chain reaction in two studies, the Boston Puerto Rican Health Study (BPRHS, n = 749) and the Genetics of Lipid-Lowering Drug and Diet Network study (GOLDN, n = 980), and plasma metabolomic profiles in the BPRHS. We examined the interaction between AMY1-CNV and age by assessing the relationship between age with glycemic traits and type 2 diabetes (T2D) according to high or low copy numbers of the AMY1 gene. Furthermore, we investigated associations between metabolites and interacting effects of AMY1-CNV and age on T2D risk. Results We found positive associations of IR with age among subjects with low AMY1-copy-numbers in both studies. T2D was marginally correlated with age in participants with low AMY1-copy-numbers but not with high AMY1-copy-numbers in the BPRHS. Metabolic pathway enrichment analysis identified the pentose metabolic pathway based on metabolites that were associated with both IR and the interactions between AMY1-CNV and age. Moreover, in older participants, high AMY1-copy-numbers tended to be associated with lower levels of ribonic acid, erythronic acid, and arabinonic acid, all of which were positively associated with IR. Conclusions We found evidence supporting a role of AMY1-CNV in modifying the relationship between age and IR. Individuals with low AMY1-copy-numbers tend to have increased IR with advancing age.


BMC Genomics ◽  
2010 ◽  
Vol 11 (1) ◽  
pp. 426 ◽  
Author(s):  
Jae-Pil Jeon ◽  
Sung-Mi Shim ◽  
Hye-Young Nam ◽  
Gil-Mi Ryu ◽  
Eun-Jung Hong ◽  
...  

2018 ◽  
Vol 65 (5) ◽  
pp. 537-545 ◽  
Author(s):  
Yao Xu ◽  
Weilin Shi ◽  
Ruhui Song ◽  
Wenlin Long ◽  
Hui Guo ◽  
...  

PLoS ONE ◽  
2010 ◽  
Vol 5 (11) ◽  
pp. e14077 ◽  
Author(s):  
Zhi-Qiang Ye ◽  
Shen Niu ◽  
Yang Yu ◽  
Hui Yu ◽  
Bao-Hong Liu ◽  
...  

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