scholarly journals A transfer function to predict soil surface reflectance from laboratory soil spectral libraries

Geoderma ◽  
2022 ◽  
Vol 405 ◽  
pp. 115432
Author(s):  
Nicolas Francos ◽  
Eyal Ben-Dor
2020 ◽  
Author(s):  
Nicolas Francos ◽  
Eyal Ben Dor ◽  
Nunzio Romano ◽  
Paolo Nasta ◽  
Briggita Szabó ◽  
...  

<p>Soil is an essential component in the environment and is vital for food security. It provides ecosystem services, filters water, supplies nutrients to plants, provides us with food, stores carbon, regulates greenhouse gases emissions and it affects our climate. Traditional soil survey methodologies are complicated, expensive, and time-consuming. Visible and infrared spectroscopy can effectively characterize soil properties. Spectral measurements are rapid, precise and inexpensive. The spectra contain information about soil properties, which comprises minerals, organic compounds, and water. Today, several Soil Spectral Libraries (SSLs) are being created worldwide because these datasets have a notable potential to be used as training datasets for machine learning methods that will benefit precision agriculture activity for better management of food production. Nonetheless, as SSL's are created under laboratory conditions it is not clear if it can be used to infer field conditions in situ and/or from the sky. Thus, study the relationship between RS, field spectroscopy and the laboratory measurements of soil is very important. Accordingly, this study postulates that traditional SSLs don't simulate the real spectral signatures in the field that both, satellite and airborne sensors measure as well, because they are affected by factors that are not an integral part of the soil, such as: moisture, litter, human and animal activity, plow, grass, dung, waste, etc… However, under laboratory conditions, these factors are usually removed for the preparation of SSLs. Thus, given the several SSLs available, it is necessary to evaluate the protocols that were used in these SSLs. The objective of this study is to evaluate the gap between field and laboratory spectral measurements through the analysis of the performance of spectral based models. This procedure combined two soil spectral libraries that contain 114 samples that were measured in the laboratory as well as in the field. The nature of the dataset is varied, because these samples were collected from six different fields in three countries of the Mediterranean basin: Israel, Greece and Italy. Moreover, 63 samples are mainly sandy and 51 are mainly clayey. In order to obtain optimal spectral measurements in the field, we used a new optical apparatus that simulates the sun's radiation. Next, we generated PLSR models to estimate one of the most important hydrological parameters namely “infiltration rate” that control the runoff stage, soil erosion and water storage in the soil profile. This property is strongly affected by the surface characteristics. Finally, the field based spectral model was adapted to an UAV hyperspectral sensor in order to estimate the infiltration rate from the sky. The results were successfully validated in field, and we concluded that for the estimation of the infiltration rate, SSLs must be created using surface reflectance in field because laboratory protocols can be detrimental for the performance of the dataset in question.</p><p> </p>


2014 ◽  
pp. 75-80
Author(s):  
Károly Bakos ◽  
Attila Dobos ◽  
János Nagy

In this article we are presenting the methodology applied to analyse and interpret the topsoil surface reflectance parameters of multiple samples collected in the Mugello valley area in northern Italy in October 2012. The main aim of the whole project was to discover geomorphological behaviour and situation of the area ino order to improve potential for correct dating of certain archaeological artefacts found in the nearby areas. One of the crucial problem researchers are facing in the area is the lack of understanding of the underlying geological and geomorphological processes that were describing and characterizing the area and that played important role not only in the current geography and landscape formation but also in the transportation of various sediments and artefacts. In this particular research the main aim is to examine the possibility of developing a quick way to assess low level properties of the soil using hand held spectrometer and rapid analysis of cross-section using in situ measurement techniques. In this work we collected over 2000 individual samples of topsoil surface reflectance properties that we organized into a spectral library. This library is then to be used to describe physical and chemical processes in the soil. To support the analysis results were compared to analysis results from different kind of assessments in the same area. Our results show a great potential of application of hand held imaging spectrometer in soil property analysis based on the top soil surface reflectance parameters.


2015 ◽  
Vol 140 (5) ◽  
pp. 449-458 ◽  
Author(s):  
Yahia Othman ◽  
Caiti Steele ◽  
Dawn VanLeeuwen ◽  
Rolston St. Hilaire

For large fields, remote sensing might permit plant low moisture status to be detected early, and this may improve drought detection and monitoring. The objective of this study was to determine whether canopy and soil surface reflectance data derived from a handheld spectroradiometer can detect moisture status assessed using midday stem water potential (ψsmd) in pecan (Carya illinoinensis) during cyclic flood irrigations. We conducted the study simultaneously on two mature pecan orchards, one in a sandy loam (La Mancha) and the other in a clay loam (Leyendecker) soil. We were particularly interested in detecting moisture status in the −0.90 to −1.5 MPa ψsmd range because our previous studies indicated this was the critical range for irrigating pecan. Midday stem water potential, photosynthesis (A) and canopy and soil surface reflectance measurements were taken over the course of irrigation dry-down cycles at ψsmd levels of −0.40 to −0.85 MPa (well watered) and −0.9 to −1.5 MPa (water deficit). The decline in A averaged 34% in La Mancha and 25% in Leyendecker orchard when ψsmd ranged from −0.9 to −1.5 MPa. Average canopy surface reflectance of well-watered trees (ψsmd −0.4 to −0.85 MPa) was significantly higher than the same trees experiencing water deficits (ψsmd −0.9 to −1.5 MPa) within the 350- to 2500-nm bands range. Conversely, soil surface reflectance of well-watered trees was lower than water deficit trees over all bands. At both orchards, coefficient of determinations between ψsmd and all soil and canopy bands and surface reflectance indices were less than 0.62. But discriminant analysis models derived from combining soil and canopy reflectance data of well-watered and water-deficit trees had high classification accuracy (overall and cross-validation classification accuracy >80%). A discriminant model that included triangular vegetation index (TVI), photochemical reflectance index (PRI), and normalized soil moisture index (NSMI) had 85% overall accuracy and 82% cross-validation accuracy at La Mancha orchard. At Leyendecker, either a discriminant model weighted with two soil bands (690 and 2430 nm) or a discriminant model that used PRI and soil band 2430 nm had an overall classification and cross-validation accuracy of 99%. In summary, the results presented here suggest that canopy and soil hyperspectral data derived from a handheld spectroradiometer hold promise for discerning the ψsmd of pecan orchards subjected to flood irrigation.


2019 ◽  
Vol 11 (11) ◽  
pp. 1350 ◽  
Author(s):  
José Raúl Román ◽  
Emilio Rodríguez-Caballero ◽  
Borja Rodríguez-Lozano ◽  
Beatriz Roncero-Ramos ◽  
Sonia Chamizo ◽  
...  

Chlorophyll a concentration (Chla) is a well-proven proxy of biocrust development, photosynthetic organisms’ status, and recovery monitoring after environmental disturbances. However, laboratory methods for the analysis of chlorophyll require destructive sampling and are expensive and time consuming. Indirect estimation of chlorophyll a by means of soil surface reflectance analysis has been demonstrated to be an accurate, cheap, and quick alternative for chlorophyll retrieval information, especially in plants. However, its application to biocrusts has yet to be harnessed. In this study we evaluated the potential of soil surface reflectance measurements for non-destructive Chla quantification over a range of biocrust types and soils. Our results revealed that from the different spectral transformation methods and techniques, the first derivative of the reflectance and the continuum removal were the most accurate for Chla retrieval. Normalized difference values in the red-edge region and common broadband indexes (e.g., normalized difference vegetation index (NDVI)) were also sensitive to changes in Chla. However, such approaches should be carefully adapted to each specific biocrust type. On the other hand, the combination of spectral measurements with non-linear random forest (RF) models provided very good fits (R2 > 0.94) with a mean root mean square error (RMSE) of about 6.5 µg/g soil, and alleviated the need for a specific calibration for each crust type, opening a wide range of opportunities to advance our knowledge of biocrust responses to ongoing global change and degradation processes from anthropogenic disturbance.


2005 ◽  
Vol 48 (5) ◽  
pp. 1979-1986 ◽  
Author(s):  
A. L. Kaleita ◽  
L. F. Tian ◽  
M. C. Hirschi

Author(s):  
W. Z. Hou ◽  
Z. Q. Li ◽  
F. X. Zheng ◽  
L. L. Qie

This paper evaluates the information content for the retrieval of key aerosol microphysical and surface properties for multispectral single-viewing satellite polarimetric measurements cantered at 410, 443, 555, 670, 865, 1610 and 2250 nm over bright land. To conduct the information content analysis, the synthetic data are simulated by the Unified Linearized Vector Radiative Transfer Model (UNLVTM) with the intensity and polarization together over bare soil surface for various scenarios. Following the optimal estimation theory, a principal component analysis method is employed to reconstruct the multispectral surface reflectance from 410 nm to 2250 nm, and then integrated with a linear one-parametric BPDF model to represent the contribution of polarized surface reflectance, thus further to decouple the surface-atmosphere contribution from the TOA measurements. Focusing on two different aerosol models with the aerosol optical depth equal to 0.8 at 550 nm, the total DFS and DFS component of each retrieval aerosol and surface parameter are analysed. The DFS results show that the key aerosol microphysical properties, such as the fine- and coarse-mode columnar volume concentration, the effective radius and the real part of complex refractive index at 550 nm, could be well retrieved with the surface parameters simultaneously over bare soil surface type. The findings of this study can provide the guidance to the inversion algorithm development over bright surface land by taking full use of the single-viewing satellite polarimetric measurements.


2010 ◽  
Vol 29 (1) ◽  
Author(s):  
Jerzy Cierniewski ◽  
Krzysztof Kuśnierek

Author(s):  
H.A. Cohen ◽  
W. Chiu

The goal of imaging the finest detail possible in biological specimens leads to contradictory requirements for the choice of an electron dose. The dose should be as low as possible to minimize object damage, yet as high as possible to optimize image statistics. For specimens that are protected by low temperatures or for which the low resolution associated with negative stain is acceptable, the first condition may be partially relaxed, allowing the use of (for example) 6 to 10 e/Å2. However, this medium dose is marginal for obtaining the contrast transfer function (CTF) of the microscope, which is necessary to allow phase corrections to the image. We have explored two parameters that affect the CTF under medium dose conditions.Figure 1 displays the CTF for carbon (C, row 1) and triafol plus carbon (T+C, row 2). For any column, the images to which the CTF correspond were from a carbon covered hole (C) and the adjacent triafol plus carbon support film (T+C), both recorded on the same micrograph; therefore the imaging parameters of defocus, illumination angle, and electron statistics were identical.


Author(s):  
N. Bonnet ◽  
M. Troyon ◽  
P. Gallion

Two main problems in high resolution electron microscopy are first, the existence of gaps in the transfer function, and then the difficulty to find complex amplitude of the diffracted wawe from registered intensity. The solution of this second problem is in most cases only intended by the realization of several micrographs in different conditions (defocusing distance, illuminating angle, complementary objective apertures…) which can lead to severe problems of contamination or radiation damage for certain specimens.Fraunhofer holography can in principle solve both problems stated above (1,2). The microscope objective is strongly defocused (far-field region) so that the two diffracted beams do not interfere. The ideal transfer function after reconstruction is then unity and the twin image do not overlap on the reconstructed one.We show some applications of the method and results of preliminary tests.Possible application to the study of cavitiesSmall voids (or gas-filled bubbles) created by irradiation in crystalline materials can be observed near the Scherzer focus, but it is then difficult to extract other informations than the approximated size.


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