Effect of multiple agricultural stressors on freshwater ecosystems: The role of community structure, trophic status, and biodiversity-functioning relationships on ecosystem responses

2021 ◽  
pp. 151052
Author(s):  
Francesco Polazzo ◽  
Talles Bruno Oliveira dos Anjos ◽  
Alba Arenas-Sánchez ◽  
Susana Romo ◽  
Marco Vighi ◽  
...  
Keyword(s):  
Community Structure ◽  
Trophic Status ◽  
Freshwater Ecosystems ◽  
Ecosystem Responses

A null model to study community structure of microcrustacean assemblages in north Patagonian urban wetlands (39-41°S, Chile)

Crustaceana ◽  
2014 ◽  
Vol 87 (11-12) ◽  
pp. 1377-1385
Author(s):  
Patricio De los Ríos-Escalante ◽  
Andrés Muñoz-Pedreros ◽  
Patricia Möller
Keyword(s):  
Community Structure ◽  
Trophic Status ◽  
Null Model ◽  
Model Analysis ◽  
Jaccard Index ◽  
Field Observations ◽  
Urban Wetlands ◽  
Community Similarity ◽  
Chilean Patagonia ◽  
Inland Water Bodies

The inland water bodies of northern Chilean Patagonia (38-41°S) have many lakes, wetlands and ponds with different littoral and zooplanktonic crustacean assemblages. This study presents field observations of species associations sampled from shallow wetlands located in the urban zones of Valdivia (39°S) and Puerto Montt (41°S). A species presence-absence matrix was created for calculating the Jaccard Index of community similarity and for testing null models of species associations, with the aim of determining whether species associations are random or not. The results of the Jaccard Index calculations indicated the existence of non-defined groups. The results of the null model analysis denoted the presence of regulating factors for Valdivia wetlands, whereas for Puerto Montt wetlands no such factors could be demonstrated. The outcomes of both the Jaccard Index and the significant null model analysis agree with previous ecological descriptions of changes in trophic status as a consequence of changes in the surrounding basin as a determinant of species associations. The ecology of these communities is also discussed.

An inter-dependence of flood and drought: disentangling amphibian beta diversity in seasonal floodplains

2017 ◽  
Vol 68 (11) ◽  
pp. 2115 ◽  
Author(s):  
Leonardo F. B. Moreira ◽  
Tainá F. Dorado-Rodrigues ◽  
Vanda L. Ferreira ◽  
Christine Strüssmann
Keyword(s):  
Community Structure ◽  
Environmental Factors ◽  
Quantitative Data ◽  
Explanatory Variable ◽  
Biotic Interactions ◽  
Ecological Role ◽  
Β Diversity ◽  
Amphibian Community ◽  
Dry Seasons

Species composition in floodplains is often affected by different structuring factors. Although floods play a key ecological role, habitat selection in the dry periods may blur patterns of biodiversity distribution. Here, we employed a partitioning framework to investigate the contribution of turnover and nestedness to β-diversity patterns in non-arboreal amphibians from southern Pantanal ecoregion. We investigated whether components of β-diversity change by spatial and environmental factors. We sampled grasslands and dense arboreal savannas distributed in 12 sampling sites across rainy and dry seasons, and analysed species dissimilarities using quantitative data. In the savannas, both turnover and nestedness contributed similarly to β diversity. However, we found that β diversity is driven essentially by turnover, in the grasslands. In the rainy season, balanced variation in abundance was more related to altitude and factors that induce spatial patterns, whereas dissimilarities were not related to any explanatory variable during dry season. In the Pantanal ecoregion, amphibian assemblages are influenced by a variety of seasonal constraints on terrestrial movements and biotic interactions. Our findings highlighted the role of guild-specific patterns and indicated that mass effects are important mechanisms creating amphibian community structure in the Pantanal.

scholarly journals Stochastic Assembly Leads to Alternative Communities with Distinct Functions in a Bioreactor Microbial Community

mBio ◽  
2013 ◽  
Vol 4 (2) ◽  
Author(s):  
Jizhong Zhou ◽  
Wenzong Liu ◽  
Ye Deng ◽  
Yi-Huei Jiang ◽  
Kai Xue ◽  
...  
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Microbial Diversity ◽  
Microbial Community Structure ◽  
Community Assembly ◽  
Ecosystem Functioning ◽  
Dominant Role ◽  
Microbial Biodiversity ◽  
Stochastic Assembly

ABSTRACTThe processes and mechanisms of community assembly and its relationships to community functioning are central issues in ecology. Both deterministic and stochastic factors play important roles in shaping community composition and structure, but the connection between community assembly and ecosystem functioning remains elusive, especially in microbial communities. Here, we used microbial electrolysis cell reactors as a model system to examine the roles of stochastic assembly in determining microbial community structure and functions. Under identical environmental conditions with the same source community, ecological drift (i.e., initial stochastic colonization) and subsequent biotic interactions created dramatically different communities with little overlap among 14 identical reactors, indicating that stochastic assembly played dominant roles in determining microbial community structure. Neutral community modeling analysis revealed that deterministic factors also played significant roles in shaping microbial community structure in these reactors. Most importantly, the newly formed communities differed substantially in community functions (e.g., H2production), which showed strong linkages to community structure. This study is the first to demonstrate that stochastic assembly plays a dominant role in determining not only community structure but also ecosystem functions. Elucidating the links among community assembly, biodiversity, and ecosystem functioning is critical to understanding ecosystem functioning, biodiversity preservation, and ecosystem management.IMPORTANCEMicroorganisms are the most diverse group of life known on earth. Although it is well documented that microbial natural biodiversity is extremely high, it is not clear why such high diversity is generated and maintained. Numerous studies have established the roles of niche-based deterministic factors (e.g., pH, temperature, and salt) in shaping microbial biodiversity, the importance of stochastic processes in generating microbial biodiversity is rarely appreciated. Moreover, while microorganisms mediate many ecosystem processes, the relationship between microbial diversity and ecosystem functioning remains largely elusive. Using a well-controlled laboratory system, this study provides empirical support for the dominant role of stochastic assembly in creating variations of microbial diversity and the first explicit evidence for the critical role of community assembly in influencing ecosystem functioning. The results presented in this study represent important contributions to the understanding of the mechanisms, especially stochastic processes, involved in shaping microbial biodiversity.

scholarly journals Temporal and Spatial Coexistence of Archaeal and BacterialamoAGenes and Gene Transcripts in Lake Lucerne

Archaea ◽  
2013 ◽  
Vol 2013 ◽  
pp. 1-11 ◽  
Author(s):  
Elisabeth W. Vissers ◽  
Flavio S. Anselmetti ◽  
Paul L. E. Bodelier ◽  
Gerard Muyzer ◽  
Christa Schleper ◽  
...  
Keyword(s):  
Temporal Distribution ◽  
Water Layer ◽  
Distribution Patterns ◽  
Freshwater Ecosystems ◽  
Ammonia Oxidizers ◽  
Lake Lucerne ◽  
Ammonia Oxidizing Archaea ◽  
Gene Transcripts ◽  
Temporal And Spatial

Despite their crucial role in the nitrogen cycle, freshwater ecosystems are relatively rarely studied for active ammonia oxidizers (AO). This study of Lake Lucerne determined the abundance of bothamoAgenes and gene transcripts of ammonia-oxidizing archaea (AOA) and bacteria (AOB) over a period of 16 months, shedding more light on the role of both AO in a deep, alpine lake environment. At the surface, at 42 m water depth, and in the water layer immediately above the sediment, AOA generally outnumbered AOB. However, in the surface water during summer stratification, when both AO were low in abundance, AOB were more numerous than AOA. Temporal distribution patterns of AOA and AOB were comparable. Higher abundances ofamoAgene transcripts were observed at the onset and end of summer stratification. In summer, archaealamoAgenes and transcripts correlated negatively with temperature and conductivity. Concentrations of ammonium and oxygen did not vary enough to explain theamoAgene and transcript dynamics. The observed herbivorous zooplankton may have caused a hidden flux of mineralized ammonium and a change in abundance of genes and transcripts. At the surface, AO might have been repressed during summer stratification due to nutrient limitation caused by active phytoplankton.

scholarly journals STRUKTUR KOMUNITAS ZOOPLANKTON DI PERAIRAN KABUPATEN LOMBOK UTARA, PROVINSI NUSA TENGGARA BARAT

2018 ◽  
Vol 18 (2) ◽  
Author(s):  
Muhammad Junaidi ◽  
Nurliah Nurliah ◽  
Fariq Azhar
Keyword(s):  
Water Quality ◽  
Community Structure ◽  
Aquatic Ecosystems ◽  
Zooplankton Community ◽  
Geographical Information ◽  
Zooplankton Community Structure ◽  
Ecological Index ◽  
Physical Chemical ◽  
Chemical Conditions

ABSTRAKMengingat peranan zooplankton dalam ekosistem perairan sangat penting, maka dilakukan penelitian dengan tujuan untuk menganalisis struktur komunitas zooplankton yang meliputi jenis, kelimpahan, dan indek ekologi, dan  kaitan  distribusi zooplankton dan kualitas perairan di Perairan Kabupaten Lombok Utara. Pengumpulan data dirancang dengan sistem informasi geografis (SIG) pada 23 stasiun pengamatan yang ditentukan dengan teknik acak sederhana.  Hasil penelitian menunjukkan bahwa jenis dan kelimpahan zooplankton yang ditemukan di Perairan Kabupaten Lombok Utara cukup bervariasi dengan jumlah genus  sebanyak 9 yang terbagi  dari  5 kelas.  Berdasarkan perhitungan indeks ekologi menunjukkan bahwa struktur  komunitas zooplankton dalam kategori perairan yang kurang stabil. Kelimpahan dan indeks ekologi zooplankton  dipengaruhi oleh kondisi lingkungan (fisik-kimia) perairan antara lain  kecerahan, pH dan oksigen terlarut. Kata kunci : zooplankton,  struktur komunitas, kualitas perairan, kelimpahanABSTRACTConsidering that the role of zooplankton in aquatic ecosystems is very  important, research is carried out with the aim of analyzing zooplankton community structure which includes the type, abundance, and ecological index, and the relation of zooplankton distribution and water quality in North Lombok Regency Waters. Data collection was designed with a geographical information system (GIS) on 23 observation stations that were determined by simple random techniques. he results of this study indicate that the type and abundance of zooplankton found in the waters of North Lombok Regency are quite varied with the number of genus as many as 9 which are divided into 5 classes. Based on the calculation of the ecological index shows that the zooplankton community structure is in the category of less stable waters. The abundance and ecological index of zooplankton is influenced by the environmental (physical-chemical) conditions of the waters including brightness, pH and dissolved oxygen. Keywords: zooplankton, community structure, water quality, abundance 

scholarly journals Phylogenetic and Functional Diversity of Saprolegniales and Fungi Isolated from Temperate Lakes in Northeast Germany

2021 ◽  
Vol 7 (11) ◽  
pp. 968
Author(s):  
Hossein Masigol ◽  
Jason Nicholas Woodhouse ◽  
Pieter van West ◽  
Reza Mostowfizadeh-Ghalamfarsa ◽  
Keilor Rojas-Jimenez ◽  
...  
Keyword(s):  
Organic Matter ◽  
Dissolved Organic Matter ◽  
Enzymatic Activity ◽  
Humic Substances ◽  
Plant Litter ◽  
Freshwater Ecosystems ◽  
Chitinolytic Activity ◽  
Ecological Implications ◽  
Eukaryotic Organisms

The contribution of fungi to the degradation of plant litter and transformation of dissolved organic matter (humic substances, in particular) in freshwater ecosystems has received increasing attention recently. However, the role of Saprolegniales as one of the most common eukaryotic organisms is rarely studied. In this study, we isolated and phylogenetically placed 51 fungal and 62 Saprolegniales strains from 12 German lakes. We studied the cellulo-, lignino-, and chitinolytic activity of the strains using plate assays. Furthermore, we determined the capacity of 10 selected strains to utilize 95 different labile compounds, using Biolog FF MicroPlates™. Finally, the ability of three selected strains to utilize maltose and degrade/produce humic substances was measured. Cladosporium and Penicillium were amongst the most prevalent fungal strains, while Saprolegnia, Achlya, and Leptolegnia were the most frequent Saprolegniales strains. Although the isolated strains assigned to genera were phylogenetically similar, their enzymatic activity and physiological profiling were quite diverse. Our results indicate that Saprolegniales, in contrast to fungi, lack ligninolytic activity and are not involved in the production/transformation of humic substances. We hypothesize that Saprolegniales and fungi might have complementary roles in interacting with dissolved organic matter, which has ecological implications for carbon cycling in freshwater ecosystems.

scholarly journals Rare microbes from diverse Earth biomes dominate community activity

2019 ◽  
Author(s):  
Rohan Sachdeva ◽  
Barbara J. Campbell ◽  
John F. Heidelberg
Keyword(s):  
Community Structure ◽  
Microbial Activity ◽  
Ecosystem Function ◽  
Total Activity ◽  
Reaction Rates ◽  
Community Activity ◽  
Crucial Component ◽  
Tightly Coupled ◽  
The Relationship

AbstractMicrobes are the Earth’s most numerous organisms and are instrumental in driving major global biological and chemical processes. Microbial activity is a crucial component of all ecosystems, as microbes have the potential to control any major biochemical process. In recent years, considerable strides have been made in describing the community structure,i.e. diversity and abundance, of microbes from the Earth’s major biomes. In virtually all environments studied, a few highly abundant taxa dominate the structure of microbial communities. Still, microbial diversity is high and is concentrated in the less abundant, or rare, fractions of the community,i.e. the “long tail” of the abundance distribution. The relationship between microbial community structure and activity, specifically the role of rare microbes, and its connection to ecosystem function, is not fully understood. We analyzed 12.3 million metagenomic and metatranscriptomic sequence assemblies and their genes from environmental, human, and engineered microbiomes, and show that microbial activity is dominated by rare microbes (96% of total activity) across all measured biomes. Further, rare microbial activity was comprised of traits that are fundamental to ecosystem and organismal health,e.g. biogeochemical cycling and infectious disease. The activity of rare microbes was also tightly coupled to temperature, revealing a link between basic biological processes,e.g. reaction rates, and community activity. Our study provides a broadly applicable and predictable paradigm that implicates rare microbes as the main microbial drivers of ecosystem function and organismal health.

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