Expression patterns of the gene encoding starch branching enzyme II in the storage roots of cassava (Manihot esculenta Crantz)

Plant Science ◽  
2003 ◽  
Vol 164 (5) ◽  
pp. 833-839 ◽  
Author(s):  
Yona Baguma ◽  
Chuanxin Sun ◽  
Staffan Ahlandsberg ◽  
Joel Mutisya ◽  
Sara Palmqvist ◽  
...  
Agronomy ◽  
2018 ◽  
Vol 8 (11) ◽  
pp. 250 ◽  
Author(s):  
Ruimei Li ◽  
Shuai Yuan ◽  
Yingdui He ◽  
Jie Fan ◽  
Yangjiao Zhou ◽  
...  

Galactinol synthases (GolSs) are the key enzymes that participate in raffinose family oligosaccharides (RFO) biosynthesis, which perform a big role in modulating plant growth and response to biotic or abiotic stresses. To date, no systematic study of this gene family has been conducted in cassava (Manihot esculenta Crantz). Here, eight MeGolS genes are isolated from the cassava genome. Based on phylogenetic background, the MeGolSs are clustered into four groups. Through predicting the cis-elements in their promoters, it was discovered that all MeGolS members act as hormone-, stress-, and tissue-specific related elements to different degrees. MeGolS genes exhibit incongruous expression patterns in various tissues, indicating that different MeGolS proteins might have diverse functions. MeGolS1 and MeGolS3–6 are highly expressed in leaves and midveins. MeGolS3–6 are highly expressed in fibrous roots. Quantitative real-time Polymerase Chain Reaction (qRT-PCR) analysis indicates that several MeGolSs, including MeGolS1, 2, 5, 6, and 7, are induced by abiotic stresses. microRNA prediction analysis indicates that several abiotic stress-related miRNAs target the MeGolS genes, such as mes-miR156, 159, and 169, which also respond to abiotic stresses. The current study is the first systematic research of GolS genes in cassava, and the results of this study provide a basis for further exploration the functional mechanism of GolS genes in cassava.


1996 ◽  
Vol 30 (6) ◽  
pp. 1223-1232 ◽  
Author(s):  
Ming Gao ◽  
Dane K. Fisher ◽  
Kyung-Nam Kim ◽  
Jack C. Shannon ◽  
Mark J. Guiltinan

PLoS ONE ◽  
2017 ◽  
Vol 12 (3) ◽  
pp. e0174238 ◽  
Author(s):  
Yuling Qin ◽  
Astride Stéphanie Mouafi Djabou ◽  
Feifei An ◽  
Kaimian Li ◽  
Zhaogui Li ◽  
...  

2013 ◽  
Vol 57 (6) ◽  
pp. 934-935 ◽  
Author(s):  
Cláudia Regina Batista de Souza ◽  
Luiz Joaquim Castelo Branco Carvalho

Biologia ◽  
2015 ◽  
Vol 70 (9) ◽  
pp. 1193-1200
Author(s):  
Xiu-Ying Wang ◽  
Chang-Shui Wang ◽  
Jian Ma ◽  
Ji-Rui Wang ◽  
Ya-Xi Liu ◽  
...  

Abstract The Starch Branching Enzyme I (SBEI) gene plays an important role in amylopectin synthesis. Here, we isolated and characterized the full-length cDNA and DNA sequences of SBEI gene from diploid Triticeae species, Triticum monococcum, T. urartu, Aegilopsspeltoides, and Ae. tauschii. Then we predicted its protein structure, analyzed its evolutionary relationship with other species, and explored its expression patterns using real-time quantitative PCR. The SBEI cDNA includes a 2,490-bp open reading frame (ORF) encoding 829 amino acids. The genomic DNA of SBEI is 5,526-bp in length, containes fourteen exons and thirteen introns, and shares a similar structure with its homologous genes from other cereal plants. Sequence similarity ranging from 70.50% to 98.02% in exons and from 15.50% to 83.63% in introns was detected. Results of phylogenetic tree based on the deduced amino acid sequences from T. monococcum and other plants indicated that T. monococcum SBEI is more closely related to T. boeoticum and T. urartu. Expression analysis revealed that T. monococcum SBEI and AGPase genes were highly expressed in the seeds at middle developmental stage. This is the first report on characterization of the SBEI gene in T. monococcum. These results could be used to explore the roles of this enzyme in amylopectin synthesis.


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