scholarly journals Pathogenic Mutations Induce Partial Structural Changes in the Native β-Sheet Structure of Transthyretin and Accelerate Aggregation

Biochemistry ◽  
2017 ◽  
Vol 56 (36) ◽  
pp. 4808-4818 ◽  
Author(s):  
Kwang Hun Lim ◽  
Anvesh K. R. Dasari ◽  
Renze Ma ◽  
Ivan Hung ◽  
Zhehong Gan ◽  
...  
1981 ◽  
Author(s):  
J Marx ◽  
G Hudry-Clergeon ◽  
L Bernard

Raman spectroscopy has proved to be a useful tool in the study of protein conformation in aqueous solution. Structural changes have been observed by this technique during the enzymatic conversion of fibrinogen into fibrin (J. Marx and col. (1979) Biochim. Biophys. Acta., 578, 107-115), particularly by the study of the Amide I and Amide III regions an important increase in the β-sheet form has been shown to occur. This variation is investigated under various conditions of ionic strength (μ) and protein concentration (c), two parameters which are known to change the fibre diameter (low values of μ and c favor an increase in the fibre diameter). The amount of β-sheet structure in fibrinogen is approximately 10 % and is unaffected by μ or c. In fibrin, the amount of β-sheet increases progressively from 20 % in fine clots (low diameter fibres) to more than 30 % in coarse clots (high diameter fibres). This correlation between the percentage of β-sheet structure and fibre diameter in fibrin indicates that numerous intermonomer hydrogen bonds are formed in the equatorial direction of the fibre. These bonds would greatly consolidate the association between monomers which is probably initiated at a few highly specific sites.


Gels ◽  
2021 ◽  
Vol 7 (2) ◽  
pp. 48
Author(s):  
Ana M. Herrero ◽  
Claudia Ruiz-Capillas

Considerable attention has been paid to emulsion gels (EGs) in recent years due to their interesting applications in food. The aim of this work is to shed light on the role played by chia oil in the technological and structural properties of EGs made from soy protein isolates (SPI) and alginate. Two systems were studied: oil-free SPI gels (SPI/G) and the corresponding SPI EGs (SPI/EG) that contain chia oil. The proximate composition, technological properties (syneresis, pH, color and texture) and structural properties using Raman spectroscopy were determined for SPI/G and SPI/EG. No noticeable (p > 0.05) syneresis was observed in either sample. The pH values were similar (p > 0.05) for SPI/G and SPI/EG, but their texture and color differed significantly depending on the presence of chia oil. SPI/EG featured significantly lower redness and more lightness and yellowness and exhibited greater puncture and gel strengths than SPI/G. Raman spectroscopy revealed significant changes in the protein secondary structure, i.e., higher (p < 0.05) α-helix and lower (p < 0.05) β-sheet, turn and unordered structures, after the incorporation of chia oil to form the corresponding SPI/EG. Apparently, there is a correlation between these structural changes and the textural modifications observed.


2015 ◽  
Vol 197 ◽  
pp. 10-17 ◽  
Author(s):  
Juan Francisco Carrascoza Mayen ◽  
Alexandru Lupan ◽  
Ciprian Cosar ◽  
Attila-Zsolt Kun ◽  
Radu Silaghi-Dumitrescu
Keyword(s):  

2009 ◽  
Vol 390 (10) ◽  
Author(s):  
Nandini Sarkar ◽  
Abhay Narain Singh ◽  
Vikash Kumar Dubey

Abstract We identified a molten globule-like intermediate of 2,5-diketo-d-gluconate reductase A (DKGR) at pH 2.5, which has a prominent β-sheet structure. The molten globule state of the protein shows amyloidogenic property >50 μm protein concentration. Interestingly, a 1:1 molar ratio of curcumin prevents amyloid formation as shown by the Thioflavin-T assay and atomic force microscopy. To the best of our knowledge, this is the first report on amyloid formation by an (α/β)8-barrel protein. The results presented here indicate that the molten globule state has an important role in amyloid formation and potential application of curcumin in protein biotechnology as well as therapeutics against amyloid diseases.


2020 ◽  
Author(s):  
Sachin Kumar ◽  
Yujen Wang ◽  
Manuel K. Rausch ◽  
Sapun H. Parekh

AbstractFibrin is a fibrous protein network that entraps blood cells and platelets to form blood clots following vascular injury. As a biomaterial, fibrin acts a biochemical scaffold as well as a viscoelastic patch that resists mechanical insults. The biomechanics and biochemistry of fibrin have been well characterized independently, showing that fibrin is a hierarchical material with numerous binding partners. However, comparatively little is known about how fibrin biomechanics and biochemistry are coupled: how does fibrin deformation influence its biochemistry at the molecular level? In this study, we show how mechanically-induced molecular structural changes in fibrin affect fibrin biochemistry and fibrin-platelet interaction. We found that tensile deformation of fibrin lead to molecular structural transitions of α-helices to β-sheets, which reduced binding of tissue plasminogen activator (tPA), an enzyme that initiates fibrinolysis, at the network and single fiber level. Moreover, binding of tPA and Thioflavin T (ThT), a commonly used β-sheet marker, was primarily mutually exclusive such that tPA bound to native (helical) fibrin whereas ThT bound to strained fibrin. Finally, we demonstrate that conformational changes in fibrin suppressed the biological activity of platelets on mechanically strained fibrin due to attenuated αIIbβ3 integrin binding. Our work shows that mechanical strain regulates fibrin molecular structure and fibrin biological activity in an elegant mechano-chemical feedback loop, which likely influences fibrinolysis and wound healing kinetics.


1980 ◽  
Vol 58 (8) ◽  
pp. 633-640 ◽  
Author(s):  
M. Pézolet ◽  
R. Savoie ◽  
J.-G. Guillot ◽  
M. Pigeon-Gosselin ◽  
D. Pallotta

The Raman spectra of aqueous solutions of histones H3 and H4 from calf thymus and from rye reflect the high degree of conservation from species to species of the primary and secondary structures of these proteins. The amount of β-sheet structure is estimated at 40 ± 5% in H4 and at 33 ± 5% in H3 from the intensities of the amide I and amide III bands at 1663 and 1241 cm−1, respectively, in the spectra. These values are independent of the salt concentration of the solutions, most likely because of the high histone concentration (~3 mM) required to obtain the spectra, which results in some aggregation of the proteins. The intensity ratio of the tyrosine doublet at 852 and 826 cm−1 indicates that the four tyrosine residues in H4 are relatively exposed to the solvent or weakly bound to positively charged groups of basic amino acids, whereas in H3 at least one tyrosine is buried inside the protein and tightly bound to a carboxylate group. The results also show that the secondary structure of H3 is slightly influenced by the state of oxidation of the two cysteine residues it contains.


Biochemistry ◽  
2003 ◽  
Vol 42 (15) ◽  
pp. 4321-4332 ◽  
Author(s):  
Serguei V. Kuznetsov ◽  
Jovencio Hilario ◽  
Timothy A. Keiderling ◽  
Anjum Ansari

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