scholarly journals Contextual experience modifies functional connectome indices of topological strength and efficiency

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Marjory Pompilus ◽  
Luis M. Colon-Perez ◽  
Matteo M. Grudny ◽  
Marcelo Febo
Keyword(s):  
Functional Connectivity ◽  
Network Topology ◽  
Brain Regions ◽  
Social Stimulus ◽  
Modular Organization ◽  
Data Sets ◽  
Eigenvector Centrality ◽  
Rich Club ◽  
Network Strength ◽  
Graph Theory Analysis

AbstractStimuli presented at short temporal delays before functional magnetic resonance imaging (fMRI) can have a robust impact on the organization of synchronous activity in resting state networks. This presents an opportunity to investigate how sensory, affective and cognitive stimuli alter functional connectivity in rodent models. In the present study we assessed the effect on functional connectivity of a familiar contextual stimulus presented 10 min prior to sedation for imaging. A subset of animals were co-presented with an unfamiliar social stimulus in the same environment to further investigate the effect of familiarity on network topology. Rats were imaged at 11.1 T and graph theory analysis was applied to matrices generated from seed-based functional connectivity data sets with 144 brain regions (nodes) and 10,152 pairwise correlations (after excluding 144 diagonal edges). Our results show substantial changes in network topology in response to the familiar (context). Presentation of the familiar context, both in the absence and presence of the social stimulus, strongly reduced network strength, global efficiency, and altered the location of the highest eigenvector centrality nodes from cortex to the hypothalamus. We did not observe changes in modular organization, nodal cartographic assignments, assortative mixing, rich club organization, and network resilience. We propose that experiential factors, perhaps involving associative or episodic memory, can exert a dramatic effect on functional network strength and efficiency when presented at a short temporal delay before imaging.

scholarly journals Contextual experience modifies functional connectome indices of topological strength and organization

2020 ◽  
Author(s):  
Marjory Pompilus ◽  
Luis M. Colon-Perez ◽  
Matteo M. Grudny ◽  
Marcelo Febo
Keyword(s):  
Functional Connectivity ◽  
Network Topology ◽  
Brain Regions ◽  
Male Rats ◽  
Social Stimulus ◽  
Familiar Stimulus ◽  
Modular Organization ◽  
Eigenvector Centrality ◽  
Rich Club ◽  
Network Strength

ABSTRACTStimuli presented at short temporal delays before functional magnetic resonance imaging (fMRI) can have a robust impact on the organization of synchronous activity in resting state networks. This presents an opportunity to investigate how sensory, affective and cognitive stimuli alter functional connectivity in rodent models. In the present study, we assessed the effect of a familiar contextual stimulus presented 10 minutes prior to sedation for imaging on functional connectivity. A subset of animals were co-presented with an unfamiliar social stimulus in the same environment to further investigate the effect of familiarity on network topology. Female and male rats were imaged at 11.1 Tesla and graph theory analysis was applied to matrices generated from seed-based functional connectivity data sets with 144 brain regions (nodes) and 10,152 pairwise correlations (edges). Our results show an unconventional network topology in response to the familiar (context) but not the unfamiliar (social) stimulus. The familiar stimulus strongly reduced network strength, global efficiency, and altered the location of the highest eigenvector centrality nodes from cortex to the hypothalamus. We did not observe changes in modular organization, nodal cartographic assignments, assortative mixing, rich club organization, and network resilience. The results suggest that experiential factors, perhaps involving associative or episodic memory, can exert a dramatic effect on functional network strength and efficiency when presented at a short temporal delay before imaging.

scholarly journals Beyond linear dynamic functional connectivity: a vine copula change point model

2021 ◽  
Author(s):  
Xin Xiong ◽  
Ivor Cribben
Keyword(s):  
Functional Connectivity ◽  
Change Point ◽  
Sliding Window ◽  
Brain Regions ◽  
Change Points ◽  
Fmri Data ◽  
Data Sets ◽  
Dynamic Functional Connectivity ◽  
Vine Copula ◽  
Vine Copulas

To estimate dynamic functional connectivity for functional magnetic resonance imaging (fMRI) data, two approaches have dominated: sliding window and change point methods. While computationally feasible, the sliding window approach has several limitations. In addition, the existing change point methods assume a Gaussian distribution for and linear dependencies between the fMRI time series. In this work, we introduce a new methodology called Vine Copula Change Point (VCCP) to estimate change points in the functional connectivity network structure between brain regions. It uses vine copulas, various state-of-the-art segmentation methods to identify multiple change points, and a likelihood ratio test or the stationary bootstrap for inference. The vine copulas allow for various forms of dependence between brain regions including tail, symmetric and asymmetric dependence, which has not been explored before in the analysis of neuroimaging data. We apply VCCP to various simulation data sets and to two fMRI data sets: a reading task and an anxiety inducing experiment. In particular, for the former data set, we illustrate the complexity of textual changes during the reading of Chapter 9 in Harry Potter and the Sorcerer's Stone and find that change points across subjects are related to changes in more than one type of textual attributes. Further, the graphs created by the vine copulas indicate the importance of working beyond Gaussianity and linear dependence. Finally, the R package vccp implementing the methodology from the paper is available from CRAN.

scholarly journals Modular origins of high-amplitude cofluctuations in fine-scale functional connectivity dynamics

2021 ◽  
Vol 118 (46) ◽  
pp. e2109380118
Author(s):  
Maria Pope ◽  
Makoto Fukushima ◽  
Richard F. Betzel ◽  
Olaf Sporns
Keyword(s):  
Functional Connectivity ◽  
Functional Neuroimaging ◽  
Empirical Studies ◽  
Structural Connectivity ◽  
Spatial Arrangement ◽  
High Amplitude ◽  
Brain Regions ◽  
Brain Dynamics ◽  
Modular Organization ◽  
Fine Scale

The topology of structural brain networks shapes brain dynamics, including the correlation structure of brain activity (functional connectivity) as estimated from functional neuroimaging data. Empirical studies have shown that functional connectivity fluctuates over time, exhibiting patterns that vary in the spatial arrangement of correlations among segregated functional systems. Recently, an exact decomposition of functional connectivity into frame-wise contributions has revealed fine-scale dynamics that are punctuated by brief and intermittent episodes (events) of high-amplitude cofluctuations involving large sets of brain regions. Their origin is currently unclear. Here, we demonstrate that similar episodes readily appear in silico using computational simulations of whole-brain dynamics. As in empirical data, simulated events contribute disproportionately to long-time functional connectivity, involve recurrence of patterned cofluctuations, and can be clustered into distinct families. Importantly, comparison of event-related patterns of cofluctuations to underlying patterns of structural connectivity reveals that modular organization present in the coupling matrix shapes patterns of event-related cofluctuations. Our work suggests that brief, intermittent events in functional dynamics are partly shaped by modular organization of structural connectivity.

scholarly journals Wide-Field Calcium Imaging of Dynamic Cortical Networks During Locomotion

2020 ◽  
Author(s):  
Sarah L. West ◽  
Justin Aronson ◽  
Laurentiu S. Popa ◽  
Russell E. Carter ◽  
Aditya Shekhar ◽  
...  
Keyword(s):  
Cerebral Cortex ◽  
Functional Connectivity ◽  
Premotor Cortex ◽  
Brain Regions ◽  
Wide Field ◽  
Dorsal Cortex ◽  
Eigenvector Centrality ◽  
Functional Interactions ◽  
Cortical Regions ◽  
Premotor Areas

ABSTRACTBehavior results in widespread activation of the cerebral cortex. To fully understanding the cerebral cortex’s role in behavior therefore requires a mesoscopic level description of the cortical regions engaged and their functional interactions. Mesoscopic imaging of Ca2+ fluorescence through transparent polymer skulls implanted on transgenic Thy1-GCaMP6f mice reveals widespread activation of the cerebral cortex during locomotion, including not just primary motor and somatosensory regions but also premotor, auditory, retrosplenial, and visual cortices. To understand these patterns of activation, we used spatial Independent Component Analysis (sICA) that segmented the dorsal cortex of individual mice into 20-22 Independent Components (ICs). The resulting ICs are highly consistent across imaging sessions and animals. Using the time series of Ca2+ fluorescence in each IC, we examined the changes in functional connectivity from rest to locomotion. Compared to rest, functional connectivity increases prior to and at the onset of locomotion. During continued walking, a global decrease in functional connectivity develops compared to rest that uncovers a distinct, sparser network in which ICs in secondary motor areas increase their correlations with more posterior ICs in somatosensory, motor, visual, and retrosplenial cortices. Eigenvector centrality analysis demonstrates that ICs located in premotor areas increase their influence on the network during locomotion while ICs in other regions, including somatosensory and primary motor, decrease in importance. We observed sequential changes in functional connectivity across transitions between rest and locomotion, with premotor areas playing an important role in coordination of computations across cortical brain regions.SIGNIFICANCEBehavior such as locomotion requires the coordination of multiple cerebral cortical regions to accurately navigate the external environment. However, it is unclear how computations from various regions are integrated to produce a single, coherent behavioral output. Here, wide-field, epifluorescence Ca2+ imaging across the dorsal cerebral cortex reveals the changing functional interactions among cortical regions during the transition from rest to locomotion. While functional connectivity among most cortical nodes primarily decreases from rest to locomotion, a well-defined network of increased correlations emerges between premotor and other cortical regions with an increase in the importance of the premotor cortex to the network. The results suggest that the role of the premotor areas in locomotion involves coordinating interactions among different cortical regions.

scholarly journals Modular origins of high-amplitude co-fluctuations in fine-scale functional connectivity dynamics

2021 ◽  
Author(s):  
Maria Pope ◽  
Makoto Fukushima ◽  
Richard Betzel ◽  
Olaf Sporns
Keyword(s):  
Functional Connectivity ◽  
Functional Neuroimaging ◽  
Empirical Studies ◽  
Structural Connectivity ◽  
Spatial Arrangement ◽  
High Amplitude ◽  
Brain Regions ◽  
Brain Dynamics ◽  
Modular Organization ◽  
Fine Scale

The topology of structural brain networks shapes brain dynamics, including the correlation structure of brain activity (functional connectivity) as estimated from functional neuroimaging data. Empirical studies have shown that functional connectivity fluctuates over time, exhibiting patterns that vary in the spatial arrangement of correlations among segregated functional systems. Recently, an exact decomposition of functional connectivity into frame-wise contributions has revealed fine-scale dynamics that are punctuated by brief and intermittent episodes (events) of high-amplitude co-fluctuations involving large sets of brain regions. Their origin is currently unclear. Here, we demonstrate that similar episodes readily appear in silico using computational simulations of whole-brain dynamics. As in empirical data, simulated events contribute disproportionately to long-time functional connectivity, involve recurrence of patterned co-fluctuations, and can be clustered into distinct families. Importantly, comparison of event-related patterns of co-fluctuations to underlying patterns of structural connectivity reveals that modular organization present in the coupling matrix shape patterns of event-related co-fluctuations. Our work suggests that brief, intermittent events in functional dynamics are partly shaped by modular organization of structural connectivity.

Engaging regularly with fiction influences connectivity in cortical areas for language and mentalizing

2017 ◽  
Author(s):  
Roel M. Willems ◽  
Franziska Hartung
Keyword(s):  
Functional Connectivity ◽  
Time Course ◽  
Language Skills ◽  
Brain Regions ◽  
Brain Areas ◽  
Daily Lives ◽  
Cortical Areas ◽  
Social Abilities ◽  
Behavioral Evidence ◽  
Amount Of Reading

Behavioral evidence suggests that engaging with fiction is positively correlated with social abilities. The rationale behind this link is that engaging with fictional narratives offers a ‘training modus’ for mentalizing and empathizing. We investigated the influence of the amount of reading that participants report doing in their daily lives, on connections between brain areas while they listened to literary narratives. Participants (N=57) listened to two literary narratives while brain activation was measured with fMRI. We computed time-course correlations between brain regions, and compared the correlation values from listening to narratives to listening to reversed speech. The between-region correlations were then related to the amount of fiction that participants read in their daily lives. Our results show that amount of fiction reading is related to functional connectivity in areas known to be involved in language and mentalizing. This suggests that reading fiction influences social cognition as well as language skills.

scholarly journals The effect of congenital blindness on resting-state functional connectivity revisited

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Maria J. S. Guerreiro ◽  
Madita Linke ◽  
Sunitha Lingareddy ◽  
Ramesh Kekunnaya ◽  
Brigitte Röder
Keyword(s):  
Functional Connectivity ◽  
Resting State ◽  
Visual Experience ◽  
Brain Regions ◽  
State Condition ◽  
Resting State Functional Connectivity ◽  
Congenital Blindness ◽  
Eyes Closed ◽  
Congenitally Blind ◽  
Eyes Open

AbstractLower resting-state functional connectivity (RSFC) between ‘visual’ and non-‘visual’ neural circuits has been reported as a hallmark of congenital blindness. In sighted individuals, RSFC between visual and non-visual brain regions has been shown to increase during rest with eyes closed relative to rest with eyes open. To determine the role of visual experience on the modulation of RSFC by resting state condition—as well as to evaluate the effect of resting state condition on group differences in RSFC—, we compared RSFC between visual and somatosensory/auditory regions in congenitally blind individuals (n = 9) and sighted participants (n = 9) during eyes open and eyes closed conditions. In the sighted group, we replicated the increase of RSFC between visual and non-visual areas during rest with eyes closed relative to rest with eyes open. This was not the case in the congenitally blind group, resulting in a lower RSFC between ‘visual’ and non-‘visual’ circuits relative to sighted controls only in the eyes closed condition. These results indicate that visual experience is necessary for the modulation of RSFC by resting state condition and highlight the importance of considering whether sighted controls should be tested with eyes open or closed in studies of functional brain reorganization as a consequence of blindness.

scholarly journals Functional network topology of the right insula affects emotion dysregulation in hyperactive-impulsive attention-deficit/hyperactivity disorder

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Tammo Viering ◽  
Pieter J. Hoekstra ◽  
Alexandra Philipsen ◽  
Jilly Naaijen ◽  
Andrea Dietrich ◽  
...  
Keyword(s):  
Attention Deficit Hyperactivity Disorder ◽  
Network Topology ◽  
Resting State ◽  
Latent Variable ◽  
Emotion Dysregulation ◽  
Adult Adhd ◽  
Brain Regions ◽  
Graph Analysis ◽  
Hyperactivity Disorder ◽  
The Right

AbstractEmotion dysregulation is common in attention-deficit/hyperactivity disorder (ADHD). It is highly prevalent in young adult ADHD and related to reduced well-being and social impairments. Neuroimaging studies reported neural activity changes in ADHD in brain regions associated with emotion processing and regulation. It is however unknown whether deficits in emotion regulation relate to changes in functional brain network topology in these regions. We used a combination of graph analysis and structural equation modelling (SEM) to analyze resting-state functional connectivity in 147 well-characterized young adults with ADHD and age-matched healthy controls from the NeuroIMAGE database. Emotion dysregulation was gauged with four scales obtained from questionnaires and operationalized through a latent variable derived from SEM. Graph analysis was applied to resting-state data and network topology measures were entered into SEM models to identify brain regions whose local network integration and connectedness differed between subjects and was associated with emotion dysregulation. The latent variable of emotion dysregulation was characterized by scales gauging emotional distress, emotional symptoms, conduct symptoms, and emotional lability. In individuals with ADHD characterized by prominent hyperactivity-impulsivity, the latent emotion dysregulation variable was related to an increased clustering and local efficiency of the right insula. Thus, in the presence of hyperactivity-impulsivity, clustered network formation of the right insula may underpin emotion dysregulation in young adult ADHD.

scholarly journals Heritability and interindividual variability of regional structure-function coupling

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Zijin Gu ◽  
Keith Wakefield Jamison ◽  
Mert Rory Sabuncu ◽  
Amy Kuceyeski
Keyword(s):  
Functional Connectivity ◽  
Structure Function ◽  
Regional Differences ◽  
Regional Scale ◽  
Brain Regions ◽  
Diffusion Weighted Mri ◽  
Regional Structure ◽  
Human Connectome Project ◽  
Structural Connections ◽  
The Relationship

AbstractWhite matter structural connections are likely to support flow of functional activation or functional connectivity. While the relationship between structural and functional connectivity profiles, here called SC-FC coupling, has been studied on a whole-brain, global level, few studies have investigated this relationship at a regional scale. Here we quantify regional SC-FC coupling in healthy young adults using diffusion-weighted MRI and resting-state functional MRI data from the Human Connectome Project and study how SC-FC coupling may be heritable and varies between individuals. We show that regional SC-FC coupling strength varies widely across brain regions, but was strongest in highly structurally connected visual and subcortical areas. We also show interindividual regional differences based on age, sex and composite cognitive scores, and that SC-FC coupling was highly heritable within certain networks. These results suggest regional structure-function coupling is an idiosyncratic feature of brain organisation that may be influenced by genetic factors.

scholarly journals A Connectome-Wide Functional Signature of Trait Anger

2021 ◽  
pp. 216770262110302
Author(s):  
M. Justin Kim ◽  
Maxwell L. Elliott ◽  
Annchen R. Knodt ◽  
Ahmad R. Hariri
Keyword(s):  
Functional Connectivity ◽  
Visual Information ◽  
Past Research ◽  
Brain Regions ◽  
Small Sample ◽  
Trait Anger ◽  
Frontal Pole ◽  
Brain Correlates ◽  
Small Sample Sizes ◽  
The Right

Past research on the brain correlates of trait anger has been limited by small sample sizes, a focus on relatively few regions of interest, and poor test–retest reliability of functional brain measures. To address these limitations, we conducted a data-driven analysis of variability in connectome-wide functional connectivity in a sample of 1,048 young adult volunteers. Multidimensional matrix regression analysis showed that self-reported trait anger maps onto variability in the whole-brain functional connectivity patterns of three brain regions that serve action-related functions: bilateral supplementary motor areas and the right lateral frontal pole. We then demonstrate that trait anger modulates the functional connectivity of these regions with canonical brain networks supporting somatomotor, affective, self-referential, and visual information processes. Our findings offer novel neuroimaging evidence for interpreting trait anger as a greater propensity to provoked action, which supports ongoing efforts to understand its utility as a potential transdiagnostic marker for disordered states characterized by aggressive behavior.

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