scholarly journals Ultrafast x-ray and electron scattering of free molecules: A comparative evaluation

2020 ◽  
Vol 7 (3) ◽  
pp. 034102 ◽  
Author(s):  
Lingyu Ma ◽  
Haiwang Yong ◽  
Joseph D. Geiser ◽  
Andrés Moreno Carrascosa ◽  
Nathan Goff ◽  
...  
Author(s):  
T. J. Beveridge

The Bacillus subtilis cell wall provides a protective sacculus about the vital constituents of the bacterium and consists of a collection of anionic hetero- and homopolymers which are mainly polysaccharidic. We recently demonstrated that unfixed walls were able to trap and retain substantial amounts of metal when suspended in aqueous metal salt solutions. These walls were briefly mixed with low concentration metal solutions (5mM for 10 min at 22°C), were well washed with deionized distilled water, and the quantity of metal uptake (atomic absorption and X-ray fluorescence), the type of staining response (electron scattering profile of thin-sections), and the crystallinity of the deposition product (X-ray diffraction of embedded specimens) determined.Since most biological material possesses little electron scattering ability electron microscopists have been forced to depend on heavy metal impregnation of the specimen before obtaining thin-section data. Our experience with these walls suggested that they may provide a suitable model system with which to study the sites of reaction for this metal deposition.


Author(s):  
Patrick Echlin

A number of papers have appeared recently which purport to have carried out x-ray microanalysis on fully frozen hydrated samples. It is important to establish reliable criteria to be certain that a sample is in a fully hydrated state. The morphological appearance of the sample is an obvious parameter because fully hydrated samples lack the detailed structure seen in their freeze dried counterparts. The electron scattering by ice within a frozen-hydrated section and from the surface of a frozen-hydrated fracture face obscures cellular detail. (Fig. 1G and 1H.) However, the morphological appearance alone can be quite deceptive for as Figures 1E and 1F show, parts of frozen-dried samples may also have the poor morphology normally associated with fully hydrated samples. It is only when one examines the x-ray spectra that an assurance can be given that the sample is fully hydrated.


Author(s):  
R.D. Leapman

Extended X-ray Absorption Fine Structure (EXAFS) analysis makes use of synchrotron radiaion to measure modulations in the absorption coefficient above core edges and hence to obtain information about local atomic environments. EXAFS arises when ejected core electrons are backscattered by surrounding atoms and interfere with the outgoing waves. Recently, interest has also been shown in using inelastic electron scattering1-4. Some advantages of Extended X-ray-edge Energy Loss Fine Structure (EXELFS) are: a) small probes formed by the analytical electron microscope give spectra from μm to nm sized areas, compared with mm diameter areas for the X-ray technique, b) EXELFS can be combined with other techniques such as electron diffraction or high resolution imaging, and c) EXELFS is sensitive to low Z elements with K edges from ˜200 eV to ˜ 3000 eV (B to Cl).


2019 ◽  
Vol 627 ◽  
pp. A39 ◽  
Author(s):  
Tuomo Salmi ◽  
Valery F. Suleimanov ◽  
Juri Poutanen

The aim of this work is to study the possible effects and biases on the radius constraints for rotation-powered millisecond pulsars when using Thomson approximation to describe electron scattering in the atmosphere models, instead of using exact formulation for Compton scattering. We compare the differences between the two models in the energy spectrum and angular distribution of the emitted radiation. We also analyse a self-generated, synthetic, phase-resolved energy spectrum, based on Compton atmosphere and the most X-ray luminous, rotation-powered millisecond pulsars observed by the Neutron star Interior Composition ExploreR (NICER). We derive constraints for the neutron star parameters using both the Compton and Thomson models. The results show that the method works by reproducing the correct parameters with the Compton model. However, biases are found in both the size and the temperature of the emitting hotspot, when using the Thomson model. The constraints on the radius are still not significantly changed, and therefore the Thomson model seems to be adequate if we are interested only in the radius measurements using NICER.


1999 ◽  
Vol 5 (S2) ◽  
pp. 80-81
Author(s):  
John Henry J. Scott ◽  
Robert L. Myklebust ◽  
Dale E. Newbury

Monte Carlo simulation of electron scattering in solids has proven valuable to electron microscopists for many years. The electron trajectories, x-ray generation volumes, and scattered electron signals produced by these simulations are used in quantitative x-ray microanalysis, image interpretation, experimental design, and hypothesis testing. Unfortunately, these simulations are often computationally expensive, especially when used to simulate an image or survey a multidimensional region of parameter space.Here we present techniques for performing Monte Carlo simulations in parallel on a cluster of existing desktop computers. The simulation of multiple, independent electron trajectories in a sample and the collateral calculation of detected x-ray and electron signals falls into a class of computational problems termed “embarrassingly parallel”, since no information needs to be exchanged between parallel threads of execution during the calculation. Such problems are ideally suited to parallel multicomputers, where a manager process distributes the computational burden over a large number of nodes.


1987 ◽  
Vol 125 ◽  
pp. 251-251
Author(s):  
Richard A. London ◽  
Ronald E. Taam ◽  
W. Michael Howard

Self consistent neutron star atmospheric models have been constructed which include the effects of Comptonization, free-free and bound-free absorption. It has been demonstrated that for parameters relevant to x-ray bursting neutron stars the atmosphere does not radiate like a blackbody during any phase of an x-ray burst. In particular, during the initial rise and final decline of the burst the temperature structure of the atmosphere is affected by backwarming associated with the high opacity due to free-free processes at low frequencies to an extent that the radiation spectrum is shifted to higher energies than a blackbody of the same effective temperature. On the other hand, near the peak of the burst, the opacity is more gray-like as the electron scattering opacity dominates; however, in this case thermalizaton of the radiation field occurs at such large optical depths (τ ∼ 5) that the spectral temperature is higher than the effective temperature. This result is found despite the importance of Comptonization in the thermalization process. Thus, the super Eddington fluxes implied by the spectral data alone are misleading and result from the improper use of the spectral temperature for the effective temperature. For neutron stars characterized by a soft equation of state and radiating near the Eddington effective temperature, fluxes obtained in this way could be overestimated by a factor of about 5.


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